RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 MYOM3Q5VTT5 1437 aa25.92■■□□□ 1.74
CALD1-209ENST00000436461 CFDP1Q9UEE9 299 aaPredicted RBP25.89■■□□□ 1.74
CALD1-209ENST00000436461 ZNF777Q9ULD5 760 aaPredicted RBP25.88■■□□□ 1.73
CALD1-209ENST00000436461 FANCAO15360 1455 aa25.88■■□□□ 1.73
CALD1-209ENST00000436461 ARAP3Q8WWN8 1544 aa25.86■■□□□ 1.73
CALD1-209ENST00000436461 ZNF644Q9H582 1327 aaPredicted RBP25.85■■□□□ 1.73
CALD1-209ENST00000436461 SAMD9LQ8IVG5 1584 aa25.84■■□□□ 1.73
CALD1-209ENST00000436461 FGD6Q6ZV73 1430 aa25.84■■□□□ 1.73
CALD1-209ENST00000436461 EFCAB2Q5VUJ9 269 aa25.82■■□□□ 1.72
CALD1-209ENST00000436461 PTPN23Q9H3S7 1636 aa25.82■■□□□ 1.72
CALD1-209ENST00000436461 TEX14Q8IWB6 1497 aa25.81■■□□□ 1.72
CALD1-209ENST00000436461 CFAP74Q9C0B2 1584 aa25.81■■□□□ 1.72
CALD1-209ENST00000436461 MIA2Q96PC5 1412 aa25.8■■□□□ 1.72
CALD1-209ENST00000436461 CAMSAP2Q08AD1 1489 aa25.79■■□□□ 1.72
CALD1-209ENST00000436461 AKNAQ7Z591 1439 aa25.79■■□□□ 1.72
CALD1-209ENST00000436461 NEO1Q92859 1461 aa25.77■■□□□ 1.72
CALD1-209ENST00000436461 ABCC1P33527 1531 aa25.76■■□□□ 1.71
CALD1-209ENST00000436461 ADGRL1O94910 1474 aa25.76■■□□□ 1.71
CALD1-209ENST00000436461 SYCP2Q9BX26 1530 aa25.75■■□□□ 1.71
CALD1-209ENST00000436461 FAM50AQ14320 339 aaKnown RBP25.75■■□□□ 1.71
CALD1-209ENST00000436461 ARHGEF12Q9NZN5 1544 aa25.75■■□□□ 1.71
CALD1-209ENST00000436461 RRBP1Q9P2E9 1410 aaKnown RBP25.74■■□□□ 1.71
CALD1-209ENST00000436461 TCOF1Q13428 1488 aaKnown RBP25.73■■□□□ 1.71
CALD1-209ENST00000436461 HNRNPMP52272 730 aaKnown RBP eCLIP25.72■■□□□ 1.71
CALD1-209ENST00000436461 SCAPERQ9BY12 1400 aa25.72■■□□□ 1.71
CALD1-209ENST00000436461 COL17A1Q9UMD9 1497 aaPredicted RBP25.69■■□□□ 1.7
CALD1-209ENST00000436461 TRAPPC8Q9Y2L5 1435 aa25.67■■□□□ 1.7
CALD1-209ENST00000436461 PLEKHH2Q8IVE3 1493 aa25.66■■□□□ 1.7
CALD1-209ENST00000436461 MBD5Q9P267 1494 aa25.66■■□□□ 1.7
CALD1-209ENST00000436461 RAPGEF3O95398 923 aa25.66■■□□□ 1.7
CALD1-209ENST00000436461 KIAA1107Q9UPP5 1409 aa25.65■■□□□ 1.7
CALD1-209ENST00000436461 RICTORQ6R327 1708 aa25.64■■□□□ 1.69
CALD1-209ENST00000436461 DENND4BO75064 1496 aaPredicted RBP25.64■■□□□ 1.69
CALD1-209ENST00000436461 KDM6BO15054 1643 aa25.63■■□□□ 1.69
CALD1-209ENST00000436461 FRMPD1Q5SYB0 1578 aa25.63■■□□□ 1.69
CALD1-209ENST00000436461 ITGAEP38570 1179 aa25.63■■□□□ 1.69
CALD1-209ENST00000436461 AFAP1Q8N556 730 aa25.63■■□□□ 1.69
CALD1-209ENST00000436461 POGZQ7Z3K3 1410 aa25.62■■□□□ 1.69
CALD1-209ENST00000436461 DNMT1P26358 1616 aaKnown RBP25.61■■□□□ 1.69
CALD1-209ENST00000436461 ARHGEF5Q12774 1597 aa25.61■■□□□ 1.69
CALD1-209ENST00000436461 CCDC141Q6ZP82 1450 aa25.59■■□□□ 1.69
CALD1-209ENST00000436461 ABCC5O15440 1437 aa25.59■■□□□ 1.69
CALD1-209ENST00000436461 DAPK1P53355 1430 aa25.58■■□□□ 1.69
CALD1-209ENST00000436461 CROCC2H7BZ55 1655 aa25.58■■□□□ 1.69
CALD1-209ENST00000436461 ZNF518AQ6AHZ1 1483 aa25.58■■□□□ 1.68
CALD1-209ENST00000436461 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.57■■□□□ 1.68
CALD1-209ENST00000436461 PTPRKQ15262 1439 aa25.55■■□□□ 1.68
CALD1-209ENST00000436461 KDM5CP41229 1560 aa25.55■■□□□ 1.68
CALD1-209ENST00000436461 CHIC2Q9UKJ5 165 aa25.52■■□□□ 1.68
CALD1-209ENST00000436461 RSPH4AQ5TD94 716 aa25.5■■□□□ 1.67
CALD1-209ENST00000436461 MYT1LQ9UL68 1186 aa25.5■■□□□ 1.67
CALD1-209ENST00000436461 HECW2Q9P2P5 1572 aa25.5■■□□□ 1.67
CALD1-209ENST00000436461 C9orf84Q5VXU9 1444 aa25.49■■□□□ 1.67
CALD1-209ENST00000436461 SPAG9O60271 1321 aaKnown RBP25.49■■□□□ 1.67
CALD1-209ENST00000436461 KIDINS220Q9ULH0 1771 aa25.49■■□□□ 1.67
CALD1-209ENST00000436461 ZFYVE16Q7Z3T8 1539 aa25.49■■□□□ 1.67
CALD1-209ENST00000436461 TSPY4P0CV99 314 aa25.48■■□□□ 1.67
CALD1-209ENST00000436461 TSPY10P0CW01 314 aa25.48■■□□□ 1.67
CALD1-209ENST00000436461 INO80Q9ULG1 1556 aaPredicted RBP25.48■■□□□ 1.67
CALD1-209ENST00000436461 ZMYM4Q5VZL5 1548 aa25.48■■□□□ 1.67
CALD1-209ENST00000436461 TRIM26Q12899 539 aaPredicted RBP25.47■■□□□ 1.67
CALD1-209ENST00000436461 ATP7AQ04656 1500 aa25.47■■□□□ 1.67
CALD1-209ENST00000436461 SHANK2Q9UPX8 1470 aa25.46■■□□□ 1.67
CALD1-209ENST00000436461 MAST1Q9Y2H9 1570 aa25.46■■□□□ 1.67
CALD1-209ENST00000436461 YEATS2Q9ULM3 1422 aa25.45■■□□□ 1.66
CALD1-209ENST00000436461 ADGBQ8N7X0 1667 aa25.44■■□□□ 1.66
CALD1-209ENST00000436461 MLH3Q9UHC1 1453 aa25.44■■□□□ 1.66
CALD1-209ENST00000436461 ABCA6Q8N139 1617 aa25.43■■□□□ 1.66
CALD1-209ENST00000436461 RTEL1-TNFRSF6BF6WH68 1400 aa25.4■■□□□ 1.66
CALD1-209ENST00000436461 RRP7BPQ9NSQ0 103 aa25.39■■□□□ 1.66
CALD1-209ENST00000436461 DIP2CQ9Y2E4 1556 aa25.39■■□□□ 1.65
CALD1-209ENST00000436461 ADGRL2O95490 1459 aa25.37■■□□□ 1.65
CALD1-209ENST00000436461 MAGI2Q86UL8 1455 aa25.37■■□□□ 1.65
CALD1-209ENST00000436461 PLXNC1O60486 1568 aa25.37■■□□□ 1.65
CALD1-209ENST00000436461 ARHGEF40Q8TER5 1519 aa25.37■■□□□ 1.65
CALD1-209ENST00000436461 NCOA1Q15788 1441 aa25.36■■□□□ 1.65
CALD1-209ENST00000436461 ANKRD30AQ9BXX3 1397 aa25.36■■□□□ 1.65
CALD1-209ENST00000436461 KIF15Q9NS87 1388 aa25.33■■□□□ 1.65
CALD1-209ENST00000436461 PCGF6Q9BYE7 350 aa25.32■■□□□ 1.64
CALD1-209ENST00000436461 ROCK1Q13464 1354 aa25.32■■□□□ 1.64
CALD1-209ENST00000436461 SIGLEC1Q9BZZ2 1709 aa25.31■■□□□ 1.64
CALD1-209ENST00000436461 ATP10AO60312 1499 aa25.28■■□□□ 1.64
CALD1-209ENST00000436461 A2MP01023 1474 aa25.28■■□□□ 1.64
CALD1-209ENST00000436461 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
CALD1-209ENST00000436461 NAIPQ13075 1403 aa25.27■■□□□ 1.64
CALD1-209ENST00000436461 DUOX2Q9NRD8 1548 aa25.26■■□□□ 1.63
CALD1-209ENST00000436461 HFM1A2PYH4 1435 aa25.24■■□□□ 1.63
CALD1-209ENST00000436461 DHX29Q7Z478 1369 aaKnown RBP25.23■■□□□ 1.63
CALD1-209ENST00000436461 ANKRD50Q9ULJ7 1429 aa25.22■■□□□ 1.63
CALD1-209ENST00000436461 REREQ9P2R6 1566 aa25.21■■□□□ 1.63
CALD1-209ENST00000436461 ERBINQ96RT1 1412 aa25.18■■□□□ 1.62
CALD1-209ENST00000436461 SETD5Q9C0A6 1442 aa25.17■■□□□ 1.62
CALD1-209ENST00000436461 KIF3BO15066 747 aa25.16■■□□□ 1.62
CALD1-209ENST00000436461 ARID4BQ4LE39 1312 aaPredicted RBP25.16■■□□□ 1.62
CALD1-209ENST00000436461 EIF2AK4Q9P2K8 1649 aaKnown RBP25.15■■□□□ 1.62
CALD1-209ENST00000436461 RAB3GAP2Q9H2M9 1393 aa25.14■■□□□ 1.61
CALD1-209ENST00000436461 AGLP35573 1532 aa25.12■■□□□ 1.61
CALD1-209ENST00000436461 MLECQ14165 292 aa25.12■■□□□ 1.61
CALD1-209ENST00000436461 BCORL1Q5H9F3 1711 aa25.11■■□□□ 1.61
CALD1-209ENST00000436461 GGT6Q6P531 493 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms