RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PCF11O94913 1555 aaKnown RBP17.65■□□□□ 0.42
HMGCL-204ENST00000436439 SCAPERQ9BY12 1400 aa17.65■□□□□ 0.42
HMGCL-204ENST00000436439 POGZQ7Z3K3 1410 aa17.64■□□□□ 0.41
HMGCL-204ENST00000436439 TROQ12816 1431 aaPredicted RBP17.63■□□□□ 0.41
HMGCL-204ENST00000436439 ILDR1Q86SU0 546 aaPredicted RBP17.63■□□□□ 0.41
HMGCL-204ENST00000436439 CDC42BPBQ9Y5S2 1711 aa17.62■□□□□ 0.41
HMGCL-204ENST00000436439 MAGI2Q86UL8 1455 aa17.61■□□□□ 0.41
HMGCL-204ENST00000436439 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
HMGCL-204ENST00000436439 CDK11AQ9UQ88 783 aaPredicted RBP17.6■□□□□ 0.41
HMGCL-204ENST00000436439 FER1L4A9Z1Z3 1794 aa17.58■□□□□ 0.41
HMGCL-204ENST00000436439 ARHGAP5Q13017 1502 aa17.58■□□□□ 0.41
HMGCL-204ENST00000436439 CLIP1P30622 1438 aa17.57■□□□□ 0.4
HMGCL-204ENST00000436439 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
HMGCL-204ENST00000436439 EFCAB2Q5VUJ9 269 aa17.57■□□□□ 0.4
HMGCL-204ENST00000436439 LMTK3Q96Q04 1460 aa17.56■□□□□ 0.4
HMGCL-204ENST00000436439 PREX2Q70Z35 1606 aa17.56■□□□□ 0.4
HMGCL-204ENST00000436439 KDM5CP41229 1560 aa17.55■□□□□ 0.4
HMGCL-204ENST00000436439 CCDC18Q5T9S5 1454 aa17.55■□□□□ 0.4
HMGCL-204ENST00000436439 CDC42BPAQ5VT25 1732 aa17.54■□□□□ 0.4
HMGCL-204ENST00000436439 ATP10AO60312 1499 aa17.53■□□□□ 0.4
HMGCL-204ENST00000436439 ZNF518AQ6AHZ1 1483 aa17.53■□□□□ 0.4
HMGCL-204ENST00000436439 MLECQ14165 292 aa17.53■□□□□ 0.4
HMGCL-204ENST00000436439 C9orf84Q5VXU9 1444 aa17.52■□□□□ 0.4
HMGCL-204ENST00000436439 FYCO1Q9BQS8 1478 aa17.51■□□□□ 0.39
HMGCL-204ENST00000436439 ITSN2Q9NZM3 1697 aa17.51■□□□□ 0.39
HMGCL-204ENST00000436439 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
HMGCL-204ENST00000436439 AFAP1Q8N556 730 aa17.51■□□□□ 0.39
HMGCL-204ENST00000436439 ARHGEF12Q9NZN5 1544 aa17.51■□□□□ 0.39
HMGCL-204ENST00000436439 DIP2CQ9Y2E4 1556 aa17.51■□□□□ 0.39
HMGCL-204ENST00000436439 ABCC1P33527 1531 aa17.5■□□□□ 0.39
HMGCL-204ENST00000436439 ABCA6Q8N139 1617 aa17.5■□□□□ 0.39
HMGCL-204ENST00000436439 TRAPPC8Q9Y2L5 1435 aa17.46■□□□□ 0.39
HMGCL-204ENST00000436439 KIDINS220Q9ULH0 1771 aa17.45■□□□□ 0.38
HMGCL-204ENST00000436439 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
HMGCL-204ENST00000436439 HSPA2P54652 639 aa17.44■□□□□ 0.38
HMGCL-204ENST00000436439 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
HMGCL-204ENST00000436439 SAMD9LQ8IVG5 1584 aa17.44■□□□□ 0.38
HMGCL-204ENST00000436439 PREX1Q8TCU6 1659 aa17.42■□□□□ 0.38
HMGCL-204ENST00000436439 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
HMGCL-204ENST00000436439 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
HMGCL-204ENST00000436439 CEBPAP49715 358 aaPredicted RBP17.4■□□□□ 0.38
HMGCL-204ENST00000436439 SYCP2Q9BX26 1530 aa17.39■□□□□ 0.37
HMGCL-204ENST00000436439 C3P01024 1663 aa17.38■□□□□ 0.37
HMGCL-204ENST00000436439 AGLP35573 1532 aa17.37■□□□□ 0.37
HMGCL-204ENST00000436439 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
HMGCL-204ENST00000436439 ZNF777Q9ULD5 760 aaPredicted RBP17.36■□□□□ 0.37
HMGCL-204ENST00000436439 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.37
HMGCL-204ENST00000436439 FBXO41Q8TF61 875 aa17.33■□□□□ 0.36
HMGCL-204ENST00000436439 STRCQ7RTU9 1775 aa17.32■□□□□ 0.36
HMGCL-204ENST00000436439 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.36
HMGCL-204ENST00000436439 SETD1BQ9UPS6 1966 aaKnown RBP17.32■□□□□ 0.36
HMGCL-204ENST00000436439 TIAM1Q13009 1591 aa17.32■□□□□ 0.36
HMGCL-204ENST00000436439 INO80Q9ULG1 1556 aaPredicted RBP17.32■□□□□ 0.36
HMGCL-204ENST00000436439 MTUS2Q5JR59 1369 aa17.32■□□□□ 0.36
HMGCL-204ENST00000436439 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
HMGCL-204ENST00000436439 ATP7AQ04656 1500 aa17.3■□□□□ 0.36
HMGCL-204ENST00000436439 EHBP1L1Q8N3D4 1523 aa17.3■□□□□ 0.36
HMGCL-204ENST00000436439 CFDP1Q9UEE9 299 aaPredicted RBP17.28■□□□□ 0.36
HMGCL-204ENST00000436439 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
HMGCL-204ENST00000436439 SPAG9O60271 1321 aaKnown RBP17.27■□□□□ 0.36
HMGCL-204ENST00000436439 UHRF1BP1Q6BDS2 1440 aa17.27■□□□□ 0.36
HMGCL-204ENST00000436439 PLXNC1O60486 1568 aa17.27■□□□□ 0.36
HMGCL-204ENST00000436439 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.35
HMGCL-204ENST00000436439 MROH2AA6NES4 1674 aa17.26■□□□□ 0.35
HMGCL-204ENST00000436439 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
HMGCL-204ENST00000436439 CLTCQ00610 1675 aaKnown RBP17.24■□□□□ 0.35
HMGCL-204ENST00000436439 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
HMGCL-204ENST00000436439 ESF1Q9H501 851 aaKnown RBP17.23■□□□□ 0.35
HMGCL-204ENST00000436439 A2MP01023 1474 aa17.23■□□□□ 0.35
HMGCL-204ENST00000436439 MBD5Q9P267 1494 aa17.23■□□□□ 0.35
HMGCL-204ENST00000436439 CNTLNQ9NXG0 1405 aa17.22■□□□□ 0.35
HMGCL-204ENST00000436439 CERKQ8TCT0 537 aa17.19■□□□□ 0.34
HMGCL-204ENST00000436439 NCOA2Q15596 1464 aa17.19■□□□□ 0.34
HMGCL-204ENST00000436439 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
HMGCL-204ENST00000436439 CAMSAP2Q08AD1 1489 aa17.16■□□□□ 0.34
HMGCL-204ENST00000436439 NPATQ14207 1427 aa17.16■□□□□ 0.34
HMGCL-204ENST00000436439 MYO3AQ8NEV4 1616 aa17.15■□□□□ 0.34
HMGCL-204ENST00000436439 GGT6Q6P531 493 aa17.15■□□□□ 0.34
HMGCL-204ENST00000436439 RTEL1-TNFRSF6BF6WH68 1400 aa17.14■□□□□ 0.33
HMGCL-204ENST00000436439 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.33
HMGCL-204ENST00000436439 ZNF142P52746 1687 aaPredicted RBP17.14■□□□□ 0.33
HMGCL-204ENST00000436439 CAMSAP1Q5T5Y3 1602 aa17.13■□□□□ 0.33
HMGCL-204ENST00000436439 NCOA1Q15788 1441 aa17.13■□□□□ 0.33
HMGCL-204ENST00000436439 DMRT2Q9Y5R5 561 aa17.13■□□□□ 0.33
HMGCL-204ENST00000436439 PTPRTO14522 1441 aa17.12■□□□□ 0.33
HMGCL-204ENST00000436439 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
HMGCL-204ENST00000436439 PTPRKQ15262 1439 aa17.12■□□□□ 0.33
HMGCL-204ENST00000436439 LRRC9Q6ZRR7 1453 aa17.1■□□□□ 0.33
HMGCL-204ENST00000436439 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
HMGCL-204ENST00000436439 ARHGEF5Q12774 1597 aa17.09■□□□□ 0.33
HMGCL-204ENST00000436439 CEP170BQ9Y4F5 1589 aaPredicted RBP17.09■□□□□ 0.33
HMGCL-204ENST00000436439 LTBP4Q8N2S1 1624 aa17.08■□□□□ 0.33
HMGCL-204ENST00000436439 KANK4Q5T7N3 995 aaPredicted RBP17.05■□□□□ 0.32
HMGCL-204ENST00000436439 PPP6R1Q9UPN7 881 aa17.05■□□□□ 0.32
HMGCL-204ENST00000436439 KIF3BO15066 747 aa17.04■□□□□ 0.32
HMGCL-204ENST00000436439 NCKAP5LQ9HCH0 1330 aa17.04■□□□□ 0.32
HMGCL-204ENST00000436439 MAP3K1Q13233 1512 aa17.03■□□□□ 0.32
HMGCL-204ENST00000436439 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
HMGCL-204ENST00000436439 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
HMGCL-204ENST00000436439 PLA2R1Q13018 1463 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms