RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
R3HDM1-207ENST00000436436 FAM205CA6NFA0 338 aa8.56□□□□□ -1.04
R3HDM1-207ENST00000436436 MFRPQ9BY79 579 aa8.56□□□□□ -1.04
R3HDM1-207ENST00000436436 SPNS2Q8IVW8 549 aa8.53□□□□□ -1.04
R3HDM1-207ENST00000436436 POTEB3A0JP26 581 aa8.52□□□□□ -1.05
R3HDM1-207ENST00000436436 POTEBQ6S5H4 581 aa8.52□□□□□ -1.05
R3HDM1-207ENST00000436436 ERBB3P21860 1342 aa8.5□□□□□ -1.05
R3HDM1-207ENST00000436436 MMRN1Q13201 1228 aa8.49□□□□□ -1.05
R3HDM1-207ENST00000436436 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
R3HDM1-207ENST00000436436 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
R3HDM1-207ENST00000436436 GPR153Q6NV75 609 aa8.47□□□□□ -1.05
R3HDM1-207ENST00000436436 KIF3CO14782 793 aa8.46□□□□□ -1.06
R3HDM1-207ENST00000436436 HS6ST3Q8IZP7 471 aa8.46□□□□□ -1.06
R3HDM1-207ENST00000436436 C2orf72A6NCS6 295 aa8.43□□□□□ -1.06
R3HDM1-207ENST00000436436 VARS2Q5ST30 1063 aaKnown RBP8.43□□□□□ -1.06
R3HDM1-207ENST00000436436 TMC2Q8TDI7 906 aa8.43□□□□□ -1.06
R3HDM1-207ENST00000436436 SLC34A2O95436 690 aa8.41□□□□□ -1.06
R3HDM1-207ENST00000436436 ARSIQ5FYB1 569 aa8.41□□□□□ -1.06
R3HDM1-207ENST00000436436 ZNF687Q8N1G0 1237 aa8.41□□□□□ -1.06
R3HDM1-207ENST00000436436 DNAJC5Q9H3Z4 198 aa8.39□□□□□ -1.07
R3HDM1-207ENST00000436436 ZNF316A6NFI3 1004 aaPredicted RBP8.38□□□□□ -1.07
R3HDM1-207ENST00000436436 PPP1R37O75864 691 aa8.38□□□□□ -1.07
R3HDM1-207ENST00000436436 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
R3HDM1-207ENST00000436436 CHGAP10645 457 aaKnown RBP8.36□□□□□ -1.07
R3HDM1-207ENST00000436436 PCDHGA4Q9Y5G9 962 aa8.35□□□□□ -1.07
R3HDM1-207ENST00000436436 PTGER2P43116 358 aa8.34□□□□□ -1.07
R3HDM1-207ENST00000436436 KHSRPQ92945 711 aaKnown RBP eCLIP8.33□□□□□ -1.083e-6■■■■□ 21.5
R3HDM1-207ENST00000436436 PBX2P40425 430 aa8.32□□□□□ -1.08
R3HDM1-207ENST00000436436 PSDA5PKW4 1024 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-207ENST00000436436 NUDT7P0C024 238 aa8.31□□□□□ -1.08
R3HDM1-207ENST00000436436 FOXK1P85037 733 aa8.31□□□□□ -1.08
R3HDM1-207ENST00000436436 GPHNQ9NQX3 736 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-207ENST00000436436 PTCD2Q8WV60 388 aaKnown RBP8.3□□□□□ -1.08
R3HDM1-207ENST00000436436 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-207ENST00000436436 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
R3HDM1-207ENST00000436436 MYT1LQ9UL68 1186 aa8.28□□□□□ -1.08
R3HDM1-207ENST00000436436 LHX6Q9UPM6 363 aa8.28□□□□□ -1.08
R3HDM1-207ENST00000436436 PLPP6Q8IY26 295 aa8.27□□□□□ -1.09
R3HDM1-207ENST00000436436 TBC1D12O60347 775 aa8.26□□□□□ -1.09
R3HDM1-207ENST00000436436 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.09
R3HDM1-207ENST00000436436 KDM4FA0A1W2PPD8 638 aa8.25□□□□□ -1.09
R3HDM1-207ENST00000436436 ANKRD13DQ6ZTN6 518 aa8.25□□□□□ -1.09
R3HDM1-207ENST00000436436 DSG2Q14126 1118 aa8.24□□□□□ -1.09
R3HDM1-207ENST00000436436 CRISPLD2Q9H0B8 497 aa8.22□□□□□ -1.09
R3HDM1-207ENST00000436436 ARHGAP33O14559 1287 aa8.2□□□□□ -1.1
R3HDM1-207ENST00000436436 PDE4AP27815 886 aa8.19□□□□□ -1.1
R3HDM1-207ENST00000436436 GTPBP6O43824 516 aaPredicted RBP8.18□□□□□ -1.1
R3HDM1-207ENST00000436436 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
R3HDM1-207ENST00000436436 POTEEQ6S8J3 1075 aa8.18□□□□□ -1.1
R3HDM1-207ENST00000436436 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
R3HDM1-207ENST00000436436 PPP1R15BQ5SWA1 713 aa8.17□□□□□ -1.1
R3HDM1-207ENST00000436436 AXIN2Q9Y2T1 843 aa8.17□□□□□ -1.1
R3HDM1-207ENST00000436436 TK2O00142 265 aa8.16□□□□□ -1.1
R3HDM1-207ENST00000436436 NCKAP5LQ9HCH0 1330 aa8.14□□□□□ -1.11
R3HDM1-207ENST00000436436 DCAF8L2P0C7V8 631 aa8.14□□□□□ -1.11
R3HDM1-207ENST00000436436 ADGRD1Q6QNK2 874 aa8.14□□□□□ -1.11
R3HDM1-207ENST00000436436 KCNH8Q96L42 1107 aa8.14□□□□□ -1.11
R3HDM1-207ENST00000436436 UPF1Q92900 1129 aaKnown RBP eCLIP8.11□□□□□ -1.11
R3HDM1-207ENST00000436436 DDX27Q96GQ7 796 aaKnown RBP8.11□□□□□ -1.11
R3HDM1-207ENST00000436436 MFSD10Q14728 455 aa8.1□□□□□ -1.11
R3HDM1-207ENST00000436436 LARP6Q9BRS8 491 aaKnown RBP8.09□□□□□ -1.11
R3HDM1-207ENST00000436436 ANO8Q9HCE9 1232 aaPredicted RBP8.09□□□□□ -1.11
R3HDM1-207ENST00000436436 PSEN2P49810 448 aa8.08□□□□□ -1.12
R3HDM1-207ENST00000436436 DMRTA1Q5VZB9 504 aa8.08□□□□□ -1.12
R3HDM1-207ENST00000436436 ZNF454Q8N9F8 522 aa8.08□□□□□ -1.12
R3HDM1-207ENST00000436436 HCSTQ9UBK5 93 aa8.08□□□□□ -1.12
R3HDM1-207ENST00000436436 HRO43593 1189 aa8.07□□□□□ -1.12
R3HDM1-207ENST00000436436 FOSBP53539 338 aa8.07□□□□□ -1.12
R3HDM1-207ENST00000436436 BCL2L12Q9HB09 334 aa8.07□□□□□ -1.12
R3HDM1-207ENST00000436436 JPH4Q96JJ6 628 aa8.06□□□□□ -1.12
R3HDM1-207ENST00000436436 KCNK17Q96T54 332 aa8.06□□□□□ -1.12
R3HDM1-207ENST00000436436 SLC4A5Q9BY07 1137 aa8.06□□□□□ -1.12
R3HDM1-207ENST00000436436 EVI5O60447 810 aa8.05□□□□□ -1.12
R3HDM1-207ENST00000436436 STAC3Q96MF2 364 aa8.05□□□□□ -1.12
R3HDM1-207ENST00000436436 MAP3K9P80192 1104 aa8.04□□□□□ -1.12
R3HDM1-207ENST00000436436 PTPREP23469 700 aa8.03□□□□□ -1.12
R3HDM1-207ENST00000436436 VPS9D1Q9Y2B5 631 aa8.03□□□□□ -1.12
R3HDM1-207ENST00000436436 BBXQ8WY36 941 aaPredicted RBP8.02□□□□□ -1.13
R3HDM1-207ENST00000436436 ZDHHC16Q969W1 377 aa8.02□□□□□ -1.13
R3HDM1-207ENST00000436436 EMILIN3Q9NT22 766 aa8□□□□□ -1.13
R3HDM1-207ENST00000436436 CADPS2Q86UW7 1296 aa7.99□□□□□ -1.13
R3HDM1-207ENST00000436436 CAMK2BQ13554 666 aa7.98□□□□□ -1.13
R3HDM1-207ENST00000436436 FBXW7Q969H0 707 aa7.98□□□□□ -1.13
R3HDM1-207ENST00000436436 ZBED2Q9BTP6 218 aa7.98□□□□□ -1.13
R3HDM1-207ENST00000436436 KCTD12Q96CX2 325 aaKnown RBP7.97□□□□□ -1.13
R3HDM1-207ENST00000436436 ADAM33Q9BZ11 813 aa7.97□□□□□ -1.13
R3HDM1-207ENST00000436436 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
R3HDM1-207ENST00000436436 AMER1Q5JTC6 1135 aaPredicted RBP7.96□□□□□ -1.14
R3HDM1-207ENST00000436436 BHMG1C9JSJ3 638 aaPredicted RBP7.95□□□□□ -1.14
R3HDM1-207ENST00000436436 PHF14O94880 888 aa7.95□□□□□ -1.14
R3HDM1-207ENST00000436436 TYW1BQ6NUM6 668 aa7.95□□□□□ -1.14
R3HDM1-207ENST00000436436 PCDHGA10Q9Y5H3 936 aa7.95□□□□□ -1.14
R3HDM1-207ENST00000436436 PPP1R3GB7ZBB8 358 aa7.94□□□□□ -1.14
R3HDM1-207ENST00000436436 NBPF3Q9H094 633 aa7.94□□□□□ -1.14
R3HDM1-207ENST00000436436 GOLGA8CPA6NN73 597 aa7.93□□□□□ -1.14
R3HDM1-207ENST00000436436 MRPL50Q8N5N7 158 aaKnown RBP7.93□□□□□ -1.14
R3HDM1-207ENST00000436436 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.93□□□□□ -1.14
R3HDM1-207ENST00000436436 SPRYD3Q8NCJ5 442 aa7.92□□□□□ -1.14
R3HDM1-207ENST00000436436 EPAS1Q99814 870 aa7.92□□□□□ -1.14
R3HDM1-207ENST00000436436 THSD4Q6ZMP0 1018 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms