RNA–Protein interactions for RNA: ENST00000435827.6

NUDC-202, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

TSL 5

Gene NUDC, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-202ENST00000435827 EFCAB2Q5VUJ9 269 aa36.16■■■■□ 3.38
NUDC-202ENST00000435827 ARID4BQ4LE39 1312 aaPredicted RBP36.14■■■■□ 3.38
NUDC-202ENST00000435827 PTPRMP28827 1452 aa36.12■■■■□ 3.37
NUDC-202ENST00000435827 MAGI2Q86UL8 1455 aa36.12■■■■□ 3.37
NUDC-202ENST00000435827 SCAPERQ9BY12 1400 aa36.1■■■■□ 3.37
NUDC-202ENST00000435827 ZFYVE16Q7Z3T8 1539 aa36.1■■■■□ 3.37
NUDC-202ENST00000435827 MADDQ8WXG6 1647 aa36.08■■■■□ 3.37
NUDC-202ENST00000435827 POGZQ7Z3K3 1410 aa36.08■■■■□ 3.37
NUDC-202ENST00000435827 YEATS2Q9ULM3 1422 aa36.01■■■■□ 3.36
NUDC-202ENST00000435827 ARHGAP5Q13017 1502 aa36■■■■□ 3.35
NUDC-202ENST00000435827 CEP162Q5TB80 1403 aa35.99■■■■□ 3.35
NUDC-202ENST00000435827 RIMS1Q86UR5 1692 aaKnown RBP35.97■■■■□ 3.35
NUDC-202ENST00000435827 SIGLEC1Q9BZZ2 1709 aa35.94■■■■□ 3.34
NUDC-202ENST00000435827 ZNF518AQ6AHZ1 1483 aa35.93■■■■□ 3.34
NUDC-202ENST00000435827 CDC42BPBQ9Y5S2 1711 aa35.92■■■■□ 3.34
NUDC-202ENST00000435827 PREX2Q70Z35 1606 aa35.89■■■■□ 3.34
NUDC-202ENST00000435827 ATP10AO60312 1499 aa35.88■■■■□ 3.33
NUDC-202ENST00000435827 KDM5CP41229 1560 aa35.87■■■■□ 3.33
NUDC-202ENST00000435827 C9orf84Q5VXU9 1444 aa35.86■■■■□ 3.33
NUDC-202ENST00000435827 AFAP1Q8N556 730 aa35.85■■■■□ 3.33
NUDC-202ENST00000435827 FER1L4A9Z1Z3 1794 aa35.83■■■■□ 3.33
NUDC-202ENST00000435827 LOC105371045A0A1W2PR82 267 aa35.82■■■■□ 3.32
NUDC-202ENST00000435827 MTUS2Q5JR59 1369 aa35.8■■■■□ 3.32
NUDC-202ENST00000435827 ABCC1P33527 1531 aa35.79■■■■□ 3.32
NUDC-202ENST00000435827 GPATCH8Q9UKJ3 1502 aaKnown RBP35.79■■■■□ 3.32
NUDC-202ENST00000435827 CDC42BPAQ5VT25 1732 aa35.79■■■■□ 3.32
NUDC-202ENST00000435827 ILDR1Q86SU0 546 aaPredicted RBP35.77■■■■□ 3.32
NUDC-202ENST00000435827 LMTK3Q96Q04 1460 aa35.76■■■■□ 3.32
NUDC-202ENST00000435827 ARHGEF12Q9NZN5 1544 aa35.76■■■■□ 3.31
NUDC-202ENST00000435827 ITSN2Q9NZM3 1697 aa35.75■■■■□ 3.31
NUDC-202ENST00000435827 TRAPPC8Q9Y2L5 1435 aa35.74■■■■□ 3.31
NUDC-202ENST00000435827 MLECQ14165 292 aa35.74■■■■□ 3.31
NUDC-202ENST00000435827 MLH3Q9UHC1 1453 aa35.73■■■■□ 3.31
NUDC-202ENST00000435827 MYT1LQ9UL68 1186 aa35.71■■■■□ 3.31
NUDC-202ENST00000435827 CCNB3Q8WWL7 1395 aa35.71■■■■□ 3.31
NUDC-202ENST00000435827 DIP2CQ9Y2E4 1556 aa35.71■■■■□ 3.31
NUDC-202ENST00000435827 REREQ9P2R6 1566 aa35.7■■■■□ 3.31
NUDC-202ENST00000435827 EHBP1L1Q8N3D4 1523 aa35.68■■■■□ 3.3
NUDC-202ENST00000435827 ZNF777Q9ULD5 760 aaPredicted RBP35.68■■■■□ 3.3
NUDC-202ENST00000435827 CFDP1Q9UEE9 299 aaPredicted RBP35.67■■■■□ 3.3
NUDC-202ENST00000435827 ABCA6Q8N139 1617 aa35.65■■■■□ 3.3
NUDC-202ENST00000435827 SAMD9LQ8IVG5 1584 aa35.65■■■■□ 3.3
NUDC-202ENST00000435827 PLPPR3Q6T4P5 718 aa35.63■■■■□ 3.29
NUDC-202ENST00000435827 KIAA1107Q9UPP5 1409 aa35.63■■■■□ 3.29
NUDC-202ENST00000435827 VPS8Q8N3P4 1428 aa35.62■■■■□ 3.29
NUDC-202ENST00000435827 PLEKHH2Q8IVE3 1493 aa35.61■■■■□ 3.29
NUDC-202ENST00000435827 HNRNPMP52272 730 aaKnown RBP eCLIP35.58■■■■□ 3.29
NUDC-202ENST00000435827 KIDINS220Q9ULH0 1771 aa35.58■■■■□ 3.29
NUDC-202ENST00000435827 SYCP2Q9BX26 1530 aa35.57■■■■□ 3.29
NUDC-202ENST00000435827 AGLP35573 1532 aa35.57■■■■□ 3.28
NUDC-202ENST00000435827 TIAM1Q13009 1591 aa35.55■■■■□ 3.28
NUDC-202ENST00000435827 PREX1Q8TCU6 1659 aa35.52■■■■□ 3.28
NUDC-202ENST00000435827 SPAG9O60271 1321 aaKnown RBP35.52■■■■□ 3.28
NUDC-202ENST00000435827 HSPA2P54652 639 aa35.49■■■■□ 3.27
NUDC-202ENST00000435827 NCOA2Q15596 1464 aa35.47■■■■□ 3.27
NUDC-202ENST00000435827 SETD1BQ9UPS6 1966 aaKnown RBP35.45■■■■□ 3.27
NUDC-202ENST00000435827 ZNF644Q9H582 1327 aaPredicted RBP35.45■■■■□ 3.27
NUDC-202ENST00000435827 SUPT6HQ7KZ85 1726 aaKnown RBP35.43■■■■□ 3.26
NUDC-202ENST00000435827 CEBPAP49715 358 aaPredicted RBP35.43■■■■□ 3.26
NUDC-202ENST00000435827 MAP3K1Q13233 1512 aa35.42■■■■□ 3.26
NUDC-202ENST00000435827 ESF1Q9H501 851 aaKnown RBP35.42■■■■□ 3.26
NUDC-202ENST00000435827 LRRC9Q6ZRR7 1453 aa35.41■■■■□ 3.26
NUDC-202ENST00000435827 MBD5Q9P267 1494 aa35.41■■■■□ 3.26
NUDC-202ENST00000435827 C3P01024 1663 aa35.4■■■■□ 3.26
NUDC-202ENST00000435827 ATP7AQ04656 1500 aa35.4■■■■□ 3.26
NUDC-202ENST00000435827 INO80Q9ULG1 1556 aaPredicted RBP35.38■■■■□ 3.25
NUDC-202ENST00000435827 FBXO41Q8TF61 875 aa35.37■■■■□ 3.25
NUDC-202ENST00000435827 CNTLNQ9NXG0 1405 aa35.36■■■■□ 3.25
NUDC-202ENST00000435827 UHRF1BP1Q6BDS2 1440 aa35.35■■■■□ 3.25
NUDC-202ENST00000435827 RSPH4AQ5TD94 716 aa35.32■■■■□ 3.24
NUDC-202ENST00000435827 RTEL1-TNFRSF6BF6WH68 1400 aa35.32■■■■□ 3.24
NUDC-202ENST00000435827 KANK4Q5T7N3 995 aaPredicted RBP35.31■■■■□ 3.24
NUDC-202ENST00000435827 A2MP01023 1474 aa35.3■■■■□ 3.24
NUDC-202ENST00000435827 MROH2AA6NES4 1674 aa35.3■■■■□ 3.24
NUDC-202ENST00000435827 CAMSAP2Q08AD1 1489 aa35.29■■■■□ 3.24
NUDC-202ENST00000435827 PLXNC1O60486 1568 aa35.28■■■■□ 3.24
NUDC-202ENST00000435827 ADGBQ8N7X0 1667 aa35.27■■■■□ 3.24
NUDC-202ENST00000435827 CCDC141Q6ZP82 1450 aa35.24■■■■□ 3.23
NUDC-202ENST00000435827 STRCQ7RTU9 1775 aa35.2■■■■□ 3.23
NUDC-202ENST00000435827 DMRT2Q9Y5R5 561 aa35.19■■■■□ 3.22
NUDC-202ENST00000435827 APLP2Q06481 763 aa35.18■■■■□ 3.22
NUDC-202ENST00000435827 ARHGEF5Q12774 1597 aa35.17■■■■□ 3.22
NUDC-202ENST00000435827 NPATQ14207 1427 aa35.16■■■■□ 3.22
NUDC-202ENST00000435827 MIA2Q96PC5 1412 aa35.16■■■■□ 3.22
NUDC-202ENST00000435827 DHX29Q7Z478 1369 aaKnown RBP35.16■■■■□ 3.22
NUDC-202ENST00000435827 PPP6R1Q9UPN7 881 aa35.15■■■■□ 3.22
NUDC-202ENST00000435827 MYOM3Q5VTT5 1437 aa35.15■■■■□ 3.22
NUDC-202ENST00000435827 CLTCQ00610 1675 aaKnown RBP35.14■■■■□ 3.22
NUDC-202ENST00000435827 ZMYM3Q14202 1370 aa35.13■■■■□ 3.21
NUDC-202ENST00000435827 TSPY4P0CV99 314 aa35.12■■■■□ 3.21
NUDC-202ENST00000435827 TSPY10P0CW01 314 aa35.12■■■■□ 3.21
NUDC-202ENST00000435827 GGT6Q6P531 493 aa35.11■■■■□ 3.21
NUDC-202ENST00000435827 CERKQ8TCT0 537 aa35.07■■■■□ 3.2
NUDC-202ENST00000435827 PTPRTO14522 1441 aa35.03■■■■□ 3.2
NUDC-202ENST00000435827 KIF3BO15066 747 aa34.99■■■■□ 3.19
NUDC-202ENST00000435827 MAST1Q9Y2H9 1570 aa34.99■■■■□ 3.19
NUDC-202ENST00000435827 ZNF142P52746 1687 aaPredicted RBP34.98■■■■□ 3.19
NUDC-202ENST00000435827 NCOA1Q15788 1441 aa34.98■■■■□ 3.19
NUDC-202ENST00000435827 MYO3AQ8NEV4 1616 aa34.97■■■■□ 3.19
NUDC-202ENST00000435827 PTPRKQ15262 1439 aa34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms