RNA–Protein interactions for RNA: ENST00000435489.6

NIPAL4-202, Transcript of NIPA like domain containing 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NIPAL4, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4-202ENST00000435489 LRRC9Q6ZRR7 1453 aa31.82■■■□□ 2.68
NIPAL4-202ENST00000435489 PPARGC1BQ86YN6 1023 aaKnown RBP31.81■■■□□ 2.68
NIPAL4-202ENST00000435489 GPATCH8Q9UKJ3 1502 aaKnown RBP31.8■■■□□ 2.68
NIPAL4-202ENST00000435489 CCNB3Q8WWL7 1395 aa31.8■■■□□ 2.68
NIPAL4-202ENST00000435489 CDC42BPBQ9Y5S2 1711 aa31.79■■■□□ 2.68
NIPAL4-202ENST00000435489 DENND4BO75064 1496 aaPredicted RBP31.79■■■□□ 2.68
NIPAL4-202ENST00000435489 PREX2Q70Z35 1606 aa31.78■■■□□ 2.68
NIPAL4-202ENST00000435489 ADGRL1O94910 1474 aa31.78■■■□□ 2.68
NIPAL4-202ENST00000435489 SCAPERQ9BY12 1400 aa31.77■■■□□ 2.68
NIPAL4-202ENST00000435489 CDC42BPAQ5VT25 1732 aa31.76■■■□□ 2.68
NIPAL4-202ENST00000435489 CFDP1Q9UEE9 299 aaPredicted RBP31.74■■■□□ 2.67
NIPAL4-202ENST00000435489 NCOA2Q15596 1464 aa31.73■■■□□ 2.67
NIPAL4-202ENST00000435489 ZNF777Q9ULD5 760 aaPredicted RBP31.71■■■□□ 2.67
NIPAL4-202ENST00000435489 SUPT6HQ7KZ85 1726 aaKnown RBP31.71■■■□□ 2.67
NIPAL4-202ENST00000435489 FRMPD1Q5SYB0 1578 aa31.7■■■□□ 2.67
NIPAL4-202ENST00000435489 RICTORQ6R327 1708 aa31.66■■■□□ 2.66
NIPAL4-202ENST00000435489 POGZQ7Z3K3 1410 aa31.66■■■□□ 2.66
NIPAL4-202ENST00000435489 AFAP1Q8N556 730 aa31.63■■■□□ 2.65
NIPAL4-202ENST00000435489 ARHGEF12Q9NZN5 1544 aa31.61■■■□□ 2.65
NIPAL4-202ENST00000435489 ABCC1P33527 1531 aa31.61■■■□□ 2.65
NIPAL4-202ENST00000435489 SAMD9LQ8IVG5 1584 aa31.6■■■□□ 2.65
NIPAL4-202ENST00000435489 ZNF518AQ6AHZ1 1483 aa31.59■■■□□ 2.65
NIPAL4-202ENST00000435489 ZNF644Q9H582 1327 aaPredicted RBP31.59■■■□□ 2.65
NIPAL4-202ENST00000435489 ITSN2Q9NZM3 1697 aa31.59■■■□□ 2.65
NIPAL4-202ENST00000435489 HNRNPMP52272 730 aaKnown RBP eCLIP31.57■■■□□ 2.64
NIPAL4-202ENST00000435489 ZMYM4Q5VZL5 1548 aa31.57■■■□□ 2.64
NIPAL4-202ENST00000435489 TRAPPC8Q9Y2L5 1435 aa31.57■■■□□ 2.64
NIPAL4-202ENST00000435489 TRIM26Q12899 539 aaPredicted RBP31.56■■■□□ 2.64
NIPAL4-202ENST00000435489 KIAA1107Q9UPP5 1409 aa31.56■■■□□ 2.64
NIPAL4-202ENST00000435489 PLEKHH2Q8IVE3 1493 aa31.54■■■□□ 2.64
NIPAL4-202ENST00000435489 MAGI2Q86UL8 1455 aa31.54■■■□□ 2.64
NIPAL4-202ENST00000435489 SYCP2Q9BX26 1530 aa31.52■■■□□ 2.64
NIPAL4-202ENST00000435489 YEATS2Q9ULM3 1422 aa31.51■■■□□ 2.63
NIPAL4-202ENST00000435489 KDM5CP41229 1560 aa31.5■■■□□ 2.63
NIPAL4-202ENST00000435489 MYOM3Q5VTT5 1437 aa31.49■■■□□ 2.63
NIPAL4-202ENST00000435489 MYT1LQ9UL68 1186 aa31.48■■■□□ 2.63
NIPAL4-202ENST00000435489 ZFYVE16Q7Z3T8 1539 aa31.47■■■□□ 2.63
NIPAL4-202ENST00000435489 ARHGEF40Q8TER5 1519 aa31.46■■■□□ 2.63
NIPAL4-202ENST00000435489 MIA2Q96PC5 1412 aa31.44■■■□□ 2.62
NIPAL4-202ENST00000435489 CAMSAP2Q08AD1 1489 aa31.44■■■□□ 2.62
NIPAL4-202ENST00000435489 MBD5Q9P267 1494 aa31.44■■■□□ 2.62
NIPAL4-202ENST00000435489 MLH3Q9UHC1 1453 aa31.44■■■□□ 2.62
NIPAL4-202ENST00000435489 KDM4FA0A1W2PPD8 638 aa31.43■■■□□ 2.62
NIPAL4-202ENST00000435489 HECW2Q9P2P5 1572 aa31.4■■■□□ 2.62
NIPAL4-202ENST00000435489 SPAG9O60271 1321 aaKnown RBP31.4■■■□□ 2.62
NIPAL4-202ENST00000435489 ATP10AO60312 1499 aa31.38■■■□□ 2.61
NIPAL4-202ENST00000435489 ARID4BQ4LE39 1312 aaPredicted RBP31.38■■■□□ 2.61
NIPAL4-202ENST00000435489 RSPH4AQ5TD94 716 aa31.38■■■□□ 2.61
NIPAL4-202ENST00000435489 PCGF6Q9BYE7 350 aa31.37■■■□□ 2.61
NIPAL4-202ENST00000435489 FGD6Q6ZV73 1430 aa31.32■■■□□ 2.61
NIPAL4-202ENST00000435489 KIDINS220Q9ULH0 1771 aa31.32■■■□□ 2.6
NIPAL4-202ENST00000435489 C9orf84Q5VXU9 1444 aa31.32■■■□□ 2.6
NIPAL4-202ENST00000435489 CCDC141Q6ZP82 1450 aa31.31■■■□□ 2.6
NIPAL4-202ENST00000435489 DIP2CQ9Y2E4 1556 aa31.3■■■□□ 2.6
NIPAL4-202ENST00000435489 ABCA6Q8N139 1617 aa31.29■■■□□ 2.6
NIPAL4-202ENST00000435489 AEBP2Q6ZN18 517 aaPredicted RBP31.28■■■□□ 2.6
NIPAL4-202ENST00000435489 ATP7AQ04656 1500 aa31.28■■■□□ 2.6
NIPAL4-202ENST00000435489 ARHGEF5Q12774 1597 aa31.28■■■□□ 2.6
NIPAL4-202ENST00000435489 TSPY4P0CV99 314 aa31.27■■■□□ 2.6
NIPAL4-202ENST00000435489 TSPY10P0CW01 314 aa31.27■■■□□ 2.6
NIPAL4-202ENST00000435489 PTPN23Q9H3S7 1636 aa31.26■■■□□ 2.59
NIPAL4-202ENST00000435489 RTEL1-TNFRSF6BF6WH68 1400 aa31.25■■■□□ 2.59
NIPAL4-202ENST00000435489 SIGLEC1Q9BZZ2 1709 aa31.25■■■□□ 2.59
NIPAL4-202ENST00000435489 INO80Q9ULG1 1556 aaPredicted RBP31.25■■■□□ 2.59
NIPAL4-202ENST00000435489 TCOF1Q13428 1488 aaKnown RBP31.23■■■□□ 2.59
NIPAL4-202ENST00000435489 REREQ9P2R6 1566 aa31.21■■■□□ 2.59
NIPAL4-202ENST00000435489 MLECQ14165 292 aa31.2■■■□□ 2.59
NIPAL4-202ENST00000435489 RRBP1Q9P2E9 1410 aaKnown RBP31.2■■■□□ 2.58
NIPAL4-202ENST00000435489 BCORL1Q5H9F3 1711 aa31.19■■■□□ 2.58
NIPAL4-202ENST00000435489 FAM50AQ14320 339 aaKnown RBP31.17■■■□□ 2.58
NIPAL4-202ENST00000435489 ADAMTSL3P82987 1691 aa31.15■■■□□ 2.58
NIPAL4-202ENST00000435489 ABCC5O15440 1437 aa31.14■■■□□ 2.58
NIPAL4-202ENST00000435489 A2MP01023 1474 aa31.14■■■□□ 2.58
NIPAL4-202ENST00000435489 AGLP35573 1532 aa31.13■■■□□ 2.57
NIPAL4-202ENST00000435489 DAPK1P53355 1430 aa31.11■■■□□ 2.57
NIPAL4-202ENST00000435489 MAST1Q9Y2H9 1570 aa31.09■■■□□ 2.57
NIPAL4-202ENST00000435489 DHX29Q7Z478 1369 aaKnown RBP31.09■■■□□ 2.57
NIPAL4-202ENST00000435489 ADGBQ8N7X0 1667 aa31.07■■■□□ 2.57
NIPAL4-202ENST00000435489 DNMT1P26358 1616 aaKnown RBP31.07■■■□□ 2.56
NIPAL4-202ENST00000435489 PLXNC1O60486 1568 aa31.07■■■□□ 2.56
NIPAL4-202ENST00000435489 MADDQ8WXG6 1647 aa31.06■■■□□ 2.56
NIPAL4-202ENST00000435489 SHANK2Q9UPX8 1470 aa31.05■■■□□ 2.56
NIPAL4-202ENST00000435489 CHIC2Q9UKJ5 165 aa31.02■■■□□ 2.56
NIPAL4-202ENST00000435489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.02■■■□□ 2.56
NIPAL4-202ENST00000435489 PTPRMP28827 1452 aa31.02■■■□□ 2.56
NIPAL4-202ENST00000435489 CROCC2H7BZ55 1655 aa31■■■□□ 2.55
NIPAL4-202ENST00000435489 RRP7BPQ9NSQ0 103 aa30.98■■■□□ 2.55
NIPAL4-202ENST00000435489 GGT6Q6P531 493 aa30.98■■■□□ 2.55
NIPAL4-202ENST00000435489 KIF3BO15066 747 aa30.97■■■□□ 2.55
NIPAL4-202ENST00000435489 RIMS1Q86UR5 1692 aaKnown RBP30.96■■■□□ 2.55
NIPAL4-202ENST00000435489 ESF1Q9H501 851 aaKnown RBP30.95■■■□□ 2.54
NIPAL4-202ENST00000435489 KIF15Q9NS87 1388 aa30.94■■■□□ 2.54
NIPAL4-202ENST00000435489 FER1L4A9Z1Z3 1794 aa30.94■■■□□ 2.54
NIPAL4-202ENST00000435489 ANKRD30AQ9BXX3 1397 aa30.94■■■□□ 2.54
NIPAL4-202ENST00000435489 NCOA1Q15788 1441 aa30.92■■■□□ 2.54
NIPAL4-202ENST00000435489 PTPRKQ15262 1439 aa30.91■■■□□ 2.54
NIPAL4-202ENST00000435489 ITGAEP38570 1179 aa30.9■■■□□ 2.54
NIPAL4-202ENST00000435489 PLPPR3Q6T4P5 718 aa30.9■■■□□ 2.54
NIPAL4-202ENST00000435489 DUOX2Q9NRD8 1548 aa30.9■■■□□ 2.54
NIPAL4-202ENST00000435489 PPP6R1Q9UPN7 881 aa30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms