RNA–Protein interactions for RNA: ENST00000435252.1

GTF3C3-204, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-204ENST00000435252 POTEJP0CG39 1038 aa11.59□□□□□ -0.55
GTF3C3-204ENST00000435252 PDE4AP27815 886 aa11.59□□□□□ -0.55
GTF3C3-204ENST00000435252 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
GTF3C3-204ENST00000435252 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
GTF3C3-204ENST00000435252 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
GTF3C3-204ENST00000435252 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.55□□□□□ -0.56
GTF3C3-204ENST00000435252 CRISPLD2Q9H0B8 497 aa11.53□□□□□ -0.56
GTF3C3-204ENST00000435252 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
GTF3C3-204ENST00000435252 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
GTF3C3-204ENST00000435252 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
GTF3C3-204ENST00000435252 GPHNQ9NQX3 736 aaPredicted RBP11.51□□□□□ -0.57
GTF3C3-204ENST00000435252 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
GTF3C3-204ENST00000435252 NCKAP5LQ9HCH0 1330 aa11.49□□□□□ -0.57
GTF3C3-204ENST00000435252 MFSD10Q14728 455 aa11.47□□□□□ -0.57
GTF3C3-204ENST00000435252 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
GTF3C3-204ENST00000435252 C2orf72A6NCS6 295 aa11.44□□□□□ -0.58
GTF3C3-204ENST00000435252 FOXK1P85037 733 aa11.44□□□□□ -0.58
GTF3C3-204ENST00000435252 SLAIN1Q8ND83 568 aa11.43□□□□□ -0.58
GTF3C3-204ENST00000435252 KIF3CO14782 793 aa11.42□□□□□ -0.58
GTF3C3-204ENST00000435252 E2F4Q16254 413 aa11.42□□□□□ -0.58
GTF3C3-204ENST00000435252 DSG2Q14126 1118 aa11.4□□□□□ -0.58
GTF3C3-204ENST00000435252 SNPHO15079 494 aa11.38□□□□□ -0.59
GTF3C3-204ENST00000435252 TMEM92Q6UXU6 159 aa11.38□□□□□ -0.59
GTF3C3-204ENST00000435252 PLPP6Q8IY26 295 aa11.38□□□□□ -0.59
GTF3C3-204ENST00000435252 NBR1Q14596 966 aa11.34□□□□□ -0.59
GTF3C3-204ENST00000435252 CAMK2BQ13554 666 aa11.33□□□□□ -0.6
GTF3C3-204ENST00000435252 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.6
GTF3C3-204ENST00000435252 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
GTF3C3-204ENST00000435252 BCANQ96GW7 911 aa11.32□□□□□ -0.6
GTF3C3-204ENST00000435252 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
GTF3C3-204ENST00000435252 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
GTF3C3-204ENST00000435252 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
GTF3C3-204ENST00000435252 TBC1D12O60347 775 aa11.29□□□□□ -0.6
GTF3C3-204ENST00000435252 ARIH1Q9Y4X5 557 aaPredicted RBP11.28□□□□□ -0.6
GTF3C3-204ENST00000435252 SLC34A2O95436 690 aa11.26□□□□□ -0.61
GTF3C3-204ENST00000435252 MAP3K9P80192 1104 aa11.25□□□□□ -0.61
GTF3C3-204ENST00000435252 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
GTF3C3-204ENST00000435252 UPF1Q92900 1129 aaKnown RBP eCLIP11.23□□□□□ -0.61
GTF3C3-204ENST00000435252 PLSCR2Q9NRY7 297 aa11.23□□□□□ -0.61
GTF3C3-204ENST00000435252 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
GTF3C3-204ENST00000435252 PTCD2Q8WV60 388 aaKnown RBP11.22□□□□□ -0.61
GTF3C3-204ENST00000435252 ZSWIM6Q9HCJ5 1215 aa11.22□□□□□ -0.61
GTF3C3-204ENST00000435252 EMILIN3Q9NT22 766 aa11.22□□□□□ -0.61
GTF3C3-204ENST00000435252 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
GTF3C3-204ENST00000435252 DPYSL4O14531 572 aa11.21□□□□□ -0.61
GTF3C3-204ENST00000435252 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
GTF3C3-204ENST00000435252 FAM163AQ96GL9 167 aaPredicted RBP11.19□□□□□ -0.62
GTF3C3-204ENST00000435252 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
GTF3C3-204ENST00000435252 PDIA6Q15084 440 aa11.17□□□□□ -0.62
GTF3C3-204ENST00000435252 ST18O60284 1047 aa11.15□□□□□ -0.62
GTF3C3-204ENST00000435252 SMYD5Q6GMV2 418 aa11.15□□□□□ -0.62
GTF3C3-204ENST00000435252 PCDHGA4Q9Y5G9 962 aa11.15□□□□□ -0.62
GTF3C3-204ENST00000435252 LCE2DQ5TA82 110 aaPredicted RBP11.14□□□□□ -0.63
GTF3C3-204ENST00000435252 EVI5O60447 810 aa11.13□□□□□ -0.63
GTF3C3-204ENST00000435252 HOXB1P14653 301 aaPredicted RBP11.09□□□□□ -0.63
GTF3C3-204ENST00000435252 SEMA3EO15041 775 aa11.08□□□□□ -0.64
GTF3C3-204ENST00000435252 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
GTF3C3-204ENST00000435252 TESPA1A2RU30 521 aaPredicted RBP11.06□□□□□ -0.64
GTF3C3-204ENST00000435252 POTEMA6NI47 508 aa11.06□□□□□ -0.64
GTF3C3-204ENST00000435252 GPR153Q6NV75 609 aa11.06□□□□□ -0.64
GTF3C3-204ENST00000435252 PCDH10Q9P2E7 1040 aa11.06□□□□□ -0.64
GTF3C3-204ENST00000435252 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
GTF3C3-204ENST00000435252 NUDT7P0C024 238 aa11.05□□□□□ -0.64
GTF3C3-204ENST00000435252 PTGER2P43116 358 aa11.05□□□□□ -0.64
GTF3C3-204ENST00000435252 POTEGQ6S5H5 508 aa11.05□□□□□ -0.64
GTF3C3-204ENST00000435252 ANO8Q9HCE9 1232 aaPredicted RBP11.04□□□□□ -0.64
GTF3C3-204ENST00000435252 GRXCR2A6NFK2 248 aa11.01□□□□□ -0.65
GTF3C3-204ENST00000435252 EMP3P54852 163 aa11.01□□□□□ -0.65
GTF3C3-204ENST00000435252 EPAS1Q99814 870 aa11.01□□□□□ -0.65
GTF3C3-204ENST00000435252 PHF14O94880 888 aa11□□□□□ -0.65
GTF3C3-204ENST00000435252 DDX12PQ92771 950 aa11□□□□□ -0.65
GTF3C3-204ENST00000435252 JPH4Q96JJ6 628 aa11□□□□□ -0.65
GTF3C3-204ENST00000435252 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.653e-6■■■■□ 22
GTF3C3-204ENST00000435252 MLLT3P42568 568 aaPredicted RBP10.98□□□□□ -0.65
GTF3C3-204ENST00000435252 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
GTF3C3-204ENST00000435252 KDM4FA0A1W2PPD8 638 aa10.97□□□□□ -0.65
GTF3C3-204ENST00000435252 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
GTF3C3-204ENST00000435252 TYW1BQ6NUM6 668 aa10.97□□□□□ -0.65
GTF3C3-204ENST00000435252 ZNF454Q8N9F8 522 aa10.96□□□□□ -0.65
GTF3C3-204ENST00000435252 MARVELD3Q96A59 401 aa10.96□□□□□ -0.65
GTF3C3-204ENST00000435252 LMOD2Q6P5Q4 547 aa10.95□□□□□ -0.66
GTF3C3-204ENST00000435252 LHX6Q9UPM6 363 aa10.95□□□□□ -0.66
GTF3C3-204ENST00000435252 ERBB3P21860 1342 aa10.94□□□□□ -0.66
GTF3C3-204ENST00000435252 FOSBP53539 338 aa10.94□□□□□ -0.66
GTF3C3-204ENST00000435252 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.94□□□□□ -0.66
GTF3C3-204ENST00000435252 ZDHHC16Q969W1 377 aa10.93□□□□□ -0.66
GTF3C3-204ENST00000435252 KCNH8Q96L42 1107 aa10.92□□□□□ -0.66
GTF3C3-204ENST00000435252 PCDHGA10Q9Y5H3 936 aa10.92□□□□□ -0.66
GTF3C3-204ENST00000435252 EN1Q05925 392 aaPredicted RBP10.91□□□□□ -0.66
GTF3C3-204ENST00000435252 FAM205CA6NFA0 338 aa10.9□□□□□ -0.66
GTF3C3-204ENST00000435252 MAP3K7O43318 606 aa10.9□□□□□ -0.66
GTF3C3-204ENST00000435252 OSBPP22059 807 aa10.9□□□□□ -0.66
GTF3C3-204ENST00000435252 GPIHBP1Q8IV16 184 aa10.9□□□□□ -0.66
GTF3C3-204ENST00000435252 HS3ST6Q96QI5 342 aa10.9□□□□□ -0.66
GTF3C3-204ENST00000435252 NUTM2FA1L443 756 aa10.87□□□□□ -0.67
GTF3C3-204ENST00000435252 RBM26Q5T8P6 1007 aaKnown RBP10.87□□□□□ -0.67
GTF3C3-204ENST00000435252 CDAN1Q8IWY9 1227 aa10.87□□□□□ -0.67
GTF3C3-204ENST00000435252 RBM33Q96EV2 1170 aaKnown RBP10.87□□□□□ -0.67
GTF3C3-204ENST00000435252 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
GTF3C3-204ENST00000435252 CERKQ8TCT0 537 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms