RNA–Protein interactions for RNA: ENST00000435022.5

HMG20B-205, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-205ENST00000435022 ZFYVE16Q7Z3T8 1539 aa36.7■■■■□ 3.47
HMG20B-205ENST00000435022 SCAPERQ9BY12 1400 aa36.69■■■■□ 3.46
HMG20B-205ENST00000435022 ARID4BQ4LE39 1312 aaPredicted RBP36.65■■■■□ 3.46
HMG20B-205ENST00000435022 CASKIN1Q8WXD9 1431 aa36.65■■■■□ 3.46
HMG20B-205ENST00000435022 MAGI2Q86UL8 1455 aa36.63■■■■□ 3.45
HMG20B-205ENST00000435022 CDK11AQ9UQ88 783 aaPredicted RBP36.63■■■■□ 3.45
HMG20B-205ENST00000435022 RIMS1Q86UR5 1692 aaKnown RBP36.61■■■■□ 3.45
HMG20B-205ENST00000435022 CLIP1P30622 1438 aa36.59■■■■□ 3.45
HMG20B-205ENST00000435022 CDC42BPBQ9Y5S2 1711 aa36.57■■■■□ 3.45
HMG20B-205ENST00000435022 EFCAB2Q5VUJ9 269 aa36.57■■■■□ 3.44
HMG20B-205ENST00000435022 ARHGAP5Q13017 1502 aa36.56■■■■□ 3.44
HMG20B-205ENST00000435022 CCDC18Q5T9S5 1454 aa36.56■■■■□ 3.44
HMG20B-205ENST00000435022 FYCO1Q9BQS8 1478 aa36.51■■■■□ 3.44
HMG20B-205ENST00000435022 KDM5CP41229 1560 aa36.51■■■■□ 3.44
HMG20B-205ENST00000435022 PREX2Q70Z35 1606 aa36.51■■■■□ 3.43
HMG20B-205ENST00000435022 ATP10AO60312 1499 aa36.46■■■■□ 3.43
HMG20B-205ENST00000435022 ZNF518AQ6AHZ1 1483 aa36.46■■■■□ 3.43
HMG20B-205ENST00000435022 LMTK3Q96Q04 1460 aa36.45■■■■□ 3.43
HMG20B-205ENST00000435022 ILDR1Q86SU0 546 aaPredicted RBP36.45■■■■□ 3.43
HMG20B-205ENST00000435022 ARHGEF12Q9NZN5 1544 aa36.43■■■■□ 3.42
HMG20B-205ENST00000435022 C9orf84Q5VXU9 1444 aa36.42■■■■□ 3.42
HMG20B-205ENST00000435022 CDC42BPAQ5VT25 1732 aa36.42■■■■□ 3.42
HMG20B-205ENST00000435022 AFAP1Q8N556 730 aa36.42■■■■□ 3.42
HMG20B-205ENST00000435022 ABCC1P33527 1531 aa36.42■■■■□ 3.42
HMG20B-205ENST00000435022 FER1L4A9Z1Z3 1794 aa36.42■■■■□ 3.42
HMG20B-205ENST00000435022 DIP2CQ9Y2E4 1556 aa36.39■■■■□ 3.42
HMG20B-205ENST00000435022 MLECQ14165 292 aa36.38■■■■□ 3.41
HMG20B-205ENST00000435022 ITSN2Q9NZM3 1697 aa36.37■■■■□ 3.41
HMG20B-205ENST00000435022 TRAPPC8Q9Y2L5 1435 aa36.35■■■■□ 3.41
HMG20B-205ENST00000435022 ABCA6Q8N139 1617 aa36.35■■■■□ 3.41
HMG20B-205ENST00000435022 MLH3Q9UHC1 1453 aa36.3■■■■□ 3.4
HMG20B-205ENST00000435022 REREQ9P2R6 1566 aa36.28■■■■□ 3.4
HMG20B-205ENST00000435022 PLPPR3Q6T4P5 718 aa36.27■■■■□ 3.4
HMG20B-205ENST00000435022 SAMD9LQ8IVG5 1584 aa36.27■■■■□ 3.4
HMG20B-205ENST00000435022 GPATCH8Q9UKJ3 1502 aaKnown RBP36.25■■■■□ 3.39
HMG20B-205ENST00000435022 KIDINS220Q9ULH0 1771 aa36.24■■■■□ 3.39
HMG20B-205ENST00000435022 HSPA2P54652 639 aa36.18■■■■□ 3.38
HMG20B-205ENST00000435022 SYCP2Q9BX26 1530 aa36.18■■■■□ 3.38
HMG20B-205ENST00000435022 AGLP35573 1532 aa36.15■■■■□ 3.38
HMG20B-205ENST00000435022 CEP162Q5TB80 1403 aa36.14■■■■□ 3.38
HMG20B-205ENST00000435022 MYT1LQ9UL68 1186 aa36.13■■■■□ 3.37
HMG20B-205ENST00000435022 CEBPAP49715 358 aaPredicted RBP36.12■■■■□ 3.37
HMG20B-205ENST00000435022 ZNF777Q9ULD5 760 aaPredicted RBP36.1■■■■□ 3.37
HMG20B-205ENST00000435022 PREX1Q8TCU6 1659 aa36.08■■■■□ 3.37
HMG20B-205ENST00000435022 TIAM1Q13009 1591 aa36.07■■■■□ 3.37
HMG20B-205ENST00000435022 MTUS2Q5JR59 1369 aa36.06■■■■□ 3.36
HMG20B-205ENST00000435022 CCNB3Q8WWL7 1395 aa36.04■■■■□ 3.36
HMG20B-205ENST00000435022 HNRNPMP52272 730 aaKnown RBP eCLIP36.04■■■■□ 3.36
HMG20B-205ENST00000435022 C3P01024 1663 aa36.03■■■■□ 3.36
HMG20B-205ENST00000435022 EHBP1L1Q8N3D4 1523 aa36.03■■■■□ 3.36
HMG20B-205ENST00000435022 INO80Q9ULG1 1556 aaPredicted RBP36.02■■■■□ 3.36
HMG20B-205ENST00000435022 KIAA1107Q9UPP5 1409 aa36.02■■■■□ 3.36
HMG20B-205ENST00000435022 ATP7AQ04656 1500 aa35.99■■■■□ 3.35
HMG20B-205ENST00000435022 CFDP1Q9UEE9 299 aaPredicted RBP35.99■■■■□ 3.35
HMG20B-205ENST00000435022 PLEKHH2Q8IVE3 1493 aa35.98■■■■□ 3.35
HMG20B-205ENST00000435022 PLXNC1O60486 1568 aa35.95■■■■□ 3.35
HMG20B-205ENST00000435022 SPAG9O60271 1321 aaKnown RBP35.95■■■■□ 3.35
HMG20B-205ENST00000435022 ZNF644Q9H582 1327 aaPredicted RBP35.93■■■■□ 3.34
HMG20B-205ENST00000435022 SUPT6HQ7KZ85 1726 aaKnown RBP35.92■■■■□ 3.34
HMG20B-205ENST00000435022 FBXO41Q8TF61 875 aa35.9■■■■□ 3.34
HMG20B-205ENST00000435022 MBD5Q9P267 1494 aa35.9■■■■□ 3.34
HMG20B-205ENST00000435022 STRCQ7RTU9 1775 aa35.89■■■■□ 3.34
HMG20B-205ENST00000435022 UHRF1BP1Q6BDS2 1440 aa35.87■■■■□ 3.33
HMG20B-205ENST00000435022 SETD1BQ9UPS6 1966 aaKnown RBP35.86■■■■□ 3.33
HMG20B-205ENST00000435022 A2MP01023 1474 aa35.85■■■■□ 3.33
HMG20B-205ENST00000435022 MROH2AA6NES4 1674 aa35.84■■■■□ 3.33
HMG20B-205ENST00000435022 CNTLNQ9NXG0 1405 aa35.83■■■■□ 3.33
HMG20B-205ENST00000435022 LOC105371045A0A1W2PR82 267 aa35.83■■■■□ 3.33
HMG20B-205ENST00000435022 NCOA2Q15596 1464 aa35.82■■■■□ 3.32
HMG20B-205ENST00000435022 ADGBQ8N7X0 1667 aa35.78■■■■□ 3.32
HMG20B-205ENST00000435022 CLTCQ00610 1675 aaKnown RBP35.76■■■■□ 3.32
HMG20B-205ENST00000435022 ESF1Q9H501 851 aaKnown RBP35.76■■■■□ 3.32
HMG20B-205ENST00000435022 VPS8Q8N3P4 1428 aa35.75■■■■□ 3.31
HMG20B-205ENST00000435022 CAMSAP2Q08AD1 1489 aa35.73■■■■□ 3.31
HMG20B-205ENST00000435022 ZMYM3Q14202 1370 aa35.71■■■■□ 3.31
HMG20B-205ENST00000435022 RTEL1-TNFRSF6BF6WH68 1400 aa35.7■■■■□ 3.31
HMG20B-205ENST00000435022 NPATQ14207 1427 aa35.69■■■■□ 3.3
HMG20B-205ENST00000435022 CCDC141Q6ZP82 1450 aa35.67■■■■□ 3.3
HMG20B-205ENST00000435022 LRRC9Q6ZRR7 1453 aa35.67■■■■□ 3.3
HMG20B-205ENST00000435022 CERKQ8TCT0 537 aa35.63■■■■□ 3.29
HMG20B-205ENST00000435022 PTPRKQ15262 1439 aa35.61■■■■□ 3.29
HMG20B-205ENST00000435022 GGT6Q6P531 493 aa35.61■■■■□ 3.29
HMG20B-205ENST00000435022 NCOA1Q15788 1441 aa35.6■■■■□ 3.29
HMG20B-205ENST00000435022 DHX29Q7Z478 1369 aaKnown RBP35.6■■■■□ 3.29
HMG20B-205ENST00000435022 MYO3AQ8NEV4 1616 aa35.6■■■■□ 3.29
HMG20B-205ENST00000435022 ARHGEF5Q12774 1597 aa35.59■■■■□ 3.29
HMG20B-205ENST00000435022 PTPRTO14522 1441 aa35.57■■■■□ 3.29
HMG20B-205ENST00000435022 ZNF142P52746 1687 aaPredicted RBP35.57■■■■□ 3.28
HMG20B-205ENST00000435022 KANK4Q5T7N3 995 aaPredicted RBP35.56■■■■□ 3.28
HMG20B-205ENST00000435022 MAP3K1Q13233 1512 aa35.56■■■■□ 3.28
HMG20B-205ENST00000435022 CAMSAP1Q5T5Y3 1602 aa35.55■■■■□ 3.28
HMG20B-205ENST00000435022 DMRT2Q9Y5R5 561 aa35.54■■■■□ 3.28
HMG20B-205ENST00000435022 CEP170BQ9Y4F5 1589 aaPredicted RBP35.5■■■■□ 3.27
HMG20B-205ENST00000435022 PPP6R1Q9UPN7 881 aa35.48■■■■□ 3.27
HMG20B-205ENST00000435022 RSPH4AQ5TD94 716 aa35.46■■■■□ 3.27
HMG20B-205ENST00000435022 LTBP4Q8N2S1 1624 aa35.46■■■■□ 3.27
HMG20B-205ENST00000435022 MAST1Q9Y2H9 1570 aa35.44■■■■□ 3.26
HMG20B-205ENST00000435022 KIF3BO15066 747 aa35.44■■■■□ 3.26
HMG20B-205ENST00000435022 KDM5DQ9BY66 1539 aa35.43■■■■□ 3.26
HMG20B-205ENST00000435022 MYOM3Q5VTT5 1437 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms