RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 ZNF316A6NFI3 1004 aaPredicted RBP27.44■■□□□ 1.98
FAM3A-212ENST00000434658 DHX57Q6P158 1386 aaKnown RBP27.44■■□□□ 1.98
FAM3A-212ENST00000434658 EHBP1L1Q8N3D4 1523 aa27.43■■□□□ 1.98
FAM3A-212ENST00000434658 NEO1Q92859 1461 aa27.43■■□□□ 1.98
FAM3A-212ENST00000434658 PHLDB1Q86UU1 1377 aa27.43■■□□□ 1.98
FAM3A-212ENST00000434658 MYO5CQ9NQX4 1742 aa27.42■■□□□ 1.98
FAM3A-212ENST00000434658 FANCAO15360 1455 aa27.42■■□□□ 1.98
FAM3A-212ENST00000434658 EFCAB2Q5VUJ9 269 aa27.39■■□□□ 1.97
FAM3A-212ENST00000434658 AKNAQ7Z591 1439 aa27.38■■□□□ 1.97
FAM3A-212ENST00000434658 ARAP3Q8WWN8 1544 aa27.37■■□□□ 1.97
FAM3A-212ENST00000434658 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
FAM3A-212ENST00000434658 ARHGAP5Q13017 1502 aa27.35■■□□□ 1.97
FAM3A-212ENST00000434658 SUPT6HQ7KZ85 1726 aaKnown RBP27.33■■□□□ 1.97
FAM3A-212ENST00000434658 CDC42BPBQ9Y5S2 1711 aa27.33■■□□□ 1.97
FAM3A-212ENST00000434658 PREX2Q70Z35 1606 aa27.32■■□□□ 1.96
FAM3A-212ENST00000434658 GPATCH8Q9UKJ3 1502 aaKnown RBP27.32■■□□□ 1.96
FAM3A-212ENST00000434658 CDC42BPAQ5VT25 1732 aa27.32■■□□□ 1.96
FAM3A-212ENST00000434658 RAPGEF3O95398 923 aa27.3■■□□□ 1.96
FAM3A-212ENST00000434658 NCOA2Q15596 1464 aa27.3■■□□□ 1.96
FAM3A-212ENST00000434658 ADGRL1O94910 1474 aa27.28■■□□□ 1.96
FAM3A-212ENST00000434658 CFDP1Q9UEE9 299 aaPredicted RBP27.26■■□□□ 1.95
FAM3A-212ENST00000434658 ZNF777Q9ULD5 760 aaPredicted RBP27.26■■□□□ 1.95
FAM3A-212ENST00000434658 SCAPERQ9BY12 1400 aa27.26■■□□□ 1.95
FAM3A-212ENST00000434658 DENND4BO75064 1496 aaPredicted RBP27.26■■□□□ 1.95
FAM3A-212ENST00000434658 ITSN2Q9NZM3 1697 aa27.19■■□□□ 1.94
FAM3A-212ENST00000434658 FRMPD1Q5SYB0 1578 aa27.19■■□□□ 1.94
FAM3A-212ENST00000434658 RICTORQ6R327 1708 aa27.17■■□□□ 1.94
FAM3A-212ENST00000434658 RAB3GAP2Q9H2M9 1393 aa27.17■■□□□ 1.94
FAM3A-212ENST00000434658 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.16■■□□□ 1.94
FAM3A-212ENST00000434658 POGZQ7Z3K3 1410 aa27.16■■□□□ 1.94
FAM3A-212ENST00000434658 SAMD9LQ8IVG5 1584 aa27.16■■□□□ 1.94
FAM3A-212ENST00000434658 ABCC1P33527 1531 aa27.15■■□□□ 1.94
FAM3A-212ENST00000434658 ITGAEP38570 1179 aa27.15■■□□□ 1.94
FAM3A-212ENST00000434658 ARHGEF12Q9NZN5 1544 aa27.14■■□□□ 1.93
FAM3A-212ENST00000434658 SETD5Q9C0A6 1442 aa27.14■■□□□ 1.93
FAM3A-212ENST00000434658 AFAP1Q8N556 730 aa27.13■■□□□ 1.93
FAM3A-212ENST00000434658 ZNF644Q9H582 1327 aaPredicted RBP27.13■■□□□ 1.93
FAM3A-212ENST00000434658 HNRNPMP52272 730 aaKnown RBP eCLIP27.12■■□□□ 1.93
FAM3A-212ENST00000434658 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
FAM3A-212ENST00000434658 ZNF518AQ6AHZ1 1483 aa27.1■■□□□ 1.93
FAM3A-212ENST00000434658 PLEKHH2Q8IVE3 1493 aa27.1■■□□□ 1.93
FAM3A-212ENST00000434658 MYOM3Q5VTT5 1437 aa27.09■■□□□ 1.93
FAM3A-212ENST00000434658 KIAA1107Q9UPP5 1409 aa27.09■■□□□ 1.93
FAM3A-212ENST00000434658 SYCP2Q9BX26 1530 aa27.08■■□□□ 1.93
FAM3A-212ENST00000434658 ZMYM4Q5VZL5 1548 aa27.07■■□□□ 1.92
FAM3A-212ENST00000434658 FAM50AQ14320 339 aaKnown RBP27.06■■□□□ 1.92
FAM3A-212ENST00000434658 MYT1LQ9UL68 1186 aa27.04■■□□□ 1.92
FAM3A-212ENST00000434658 SCAF1Q9H7N4 1312 aaKnown RBP27.04■■□□□ 1.92
FAM3A-212ENST00000434658 MAGI2Q86UL8 1455 aa27.04■■□□□ 1.92
FAM3A-212ENST00000434658 FGD6Q6ZV73 1430 aa27.04■■□□□ 1.92
FAM3A-212ENST00000434658 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
FAM3A-212ENST00000434658 CAMSAP2Q08AD1 1489 aa27.03■■□□□ 1.92
FAM3A-212ENST00000434658 KDM5CP41229 1560 aa27.03■■□□□ 1.92
FAM3A-212ENST00000434658 ACIN1Q9UKV3 1341 aaKnown RBP27.01■■□□□ 1.91
FAM3A-212ENST00000434658 YEATS2Q9ULM3 1422 aa27.01■■□□□ 1.91
FAM3A-212ENST00000434658 ZFYVE16Q7Z3T8 1539 aa27.01■■□□□ 1.91
FAM3A-212ENST00000434658 MBD5Q9P267 1494 aa26.99■■□□□ 1.91
FAM3A-212ENST00000434658 CENPBP07199 599 aaPredicted RBP26.97■■□□□ 1.91
FAM3A-212ENST00000434658 ARHGEF40Q8TER5 1519 aa26.97■■□□□ 1.91
FAM3A-212ENST00000434658 MLH3Q9UHC1 1453 aa26.97■■□□□ 1.91
FAM3A-212ENST00000434658 SPAG9O60271 1321 aaKnown RBP26.96■■□□□ 1.91
FAM3A-212ENST00000434658 PTPN23Q9H3S7 1636 aa26.96■■□□□ 1.91
FAM3A-212ENST00000434658 HECW2Q9P2P5 1572 aa26.96■■□□□ 1.91
FAM3A-212ENST00000434658 RSPH4AQ5TD94 716 aa26.95■■□□□ 1.9
FAM3A-212ENST00000434658 NEUROD1Q13562 356 aa26.93■■□□□ 1.9
FAM3A-212ENST00000434658 ATP10AO60312 1499 aa26.91■■□□□ 1.9
FAM3A-212ENST00000434658 ARID4BQ4LE39 1312 aaPredicted RBP26.9■■□□□ 1.9
FAM3A-212ENST00000434658 CCDC141Q6ZP82 1450 aa26.9■■□□□ 1.9
FAM3A-212ENST00000434658 KIDINS220Q9ULH0 1771 aa26.89■■□□□ 1.9
FAM3A-212ENST00000434658 ARHGEF5Q12774 1597 aa26.89■■□□□ 1.89
FAM3A-212ENST00000434658 MIER1Q8N108 512 aa26.88■■□□□ 1.89
FAM3A-212ENST00000434658 TCOF1Q13428 1488 aaKnown RBP26.87■■□□□ 1.89
FAM3A-212ENST00000434658 TSPY4P0CV99 314 aa26.87■■□□□ 1.89
FAM3A-212ENST00000434658 TSPY10P0CW01 314 aa26.87■■□□□ 1.89
FAM3A-212ENST00000434658 DIP2CQ9Y2E4 1556 aa26.86■■□□□ 1.89
FAM3A-212ENST00000434658 ATP7AQ04656 1500 aa26.86■■□□□ 1.89
FAM3A-212ENST00000434658 C9orf84Q5VXU9 1444 aa26.86■■□□□ 1.89
FAM3A-212ENST00000434658 ABCA6Q8N139 1617 aa26.86■■□□□ 1.89
FAM3A-212ENST00000434658 KDM4FA0A1W2PPD8 638 aa26.86■■□□□ 1.89
FAM3A-212ENST00000434658 INO80Q9ULG1 1556 aaPredicted RBP26.84■■□□□ 1.89
FAM3A-212ENST00000434658 RTEL1-TNFRSF6BF6WH68 1400 aa26.83■■□□□ 1.89
FAM3A-212ENST00000434658 HFM1A2PYH4 1435 aa26.82■■□□□ 1.88
FAM3A-212ENST00000434658 SIGLEC1Q9BZZ2 1709 aa26.81■■□□□ 1.88
FAM3A-212ENST00000434658 PTPRKQ15262 1439 aa26.79■■□□□ 1.88
FAM3A-212ENST00000434658 ABCC5O15440 1437 aa26.78■■□□□ 1.88
FAM3A-212ENST00000434658 REREQ9P2R6 1566 aa26.77■■□□□ 1.88
FAM3A-212ENST00000434658 DNMT1P26358 1616 aaKnown RBP26.76■■□□□ 1.87
FAM3A-212ENST00000434658 DAPK1P53355 1430 aa26.75■■□□□ 1.87
FAM3A-212ENST00000434658 MLECQ14165 292 aa26.75■■□□□ 1.87
FAM3A-212ENST00000434658 TIMELESSQ9UNS1 1208 aa26.75■■□□□ 1.87
FAM3A-212ENST00000434658 BCORL1Q5H9F3 1711 aa26.74■■□□□ 1.87
FAM3A-212ENST00000434658 A2MP01023 1474 aa26.73■■□□□ 1.87
FAM3A-212ENST00000434658 MAST1Q9Y2H9 1570 aa26.73■■□□□ 1.87
FAM3A-212ENST00000434658 ADGBQ8N7X0 1667 aa26.71■■□□□ 1.87
FAM3A-212ENST00000434658 CROCC2H7BZ55 1655 aa26.71■■□□□ 1.87
FAM3A-212ENST00000434658 AGLP35573 1532 aa26.71■■□□□ 1.87
FAM3A-212ENST00000434658 NAIPQ13075 1403 aa26.7■■□□□ 1.87
FAM3A-212ENST00000434658 AEBP2Q6ZN18 517 aaPredicted RBP26.69■■□□□ 1.86
FAM3A-212ENST00000434658 SHANK2Q9UPX8 1470 aa26.69■■□□□ 1.86
FAM3A-212ENST00000434658 CHIC2Q9UKJ5 165 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms