RNA–Protein interactions for RNA: ENST00000434452.5

DSC3-202, Transcript of desmocollin 3, humanhuman

TSL 5 BASIC

Gene DSC3, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-202ENST00000434452 IRX6P78412 446 aaPredicted RBP11.83□□□□□ -0.51
DSC3-202ENST00000434452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.83□□□□□ -0.52
DSC3-202ENST00000434452 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
DSC3-202ENST00000434452 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
DSC3-202ENST00000434452 APBB1O00213 710 aa11.82□□□□□ -0.52
DSC3-202ENST00000434452 HSP90AB1P08238 724 aaKnown RBP11.82□□□□□ -0.52
DSC3-202ENST00000434452 CCAR1Q8IX12 1150 aaKnown RBP11.81□□□□□ -0.52
DSC3-202ENST00000434452 HSP90B1P14625 803 aaKnown RBP11.8□□□□□ -0.52
DSC3-202ENST00000434452 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
DSC3-202ENST00000434452 PPM1FP49593 454 aaPredicted RBP11.79□□□□□ -0.52
DSC3-202ENST00000434452 EVA1CP58658 441 aa11.79□□□□□ -0.52
DSC3-202ENST00000434452 MCCP23508 829 aa11.78□□□□□ -0.52
DSC3-202ENST00000434452 KIAA1211Q6ZU35 1233 aa11.77□□□□□ -0.52
DSC3-202ENST00000434452 FOXD1Q16676 465 aa11.77□□□□□ -0.52
DSC3-202ENST00000434452 SF3B2Q13435 895 aaKnown RBP11.77□□□□□ -0.53
DSC3-202ENST00000434452 CHMP4BQ9H444 224 aaKnown RBP11.77□□□□□ -0.53
DSC3-202ENST00000434452 STK26Q9P289 416 aa11.76□□□□□ -0.53
DSC3-202ENST00000434452 RRP7BPQ9NSQ0 103 aa11.76□□□□□ -0.53
DSC3-202ENST00000434452 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
DSC3-202ENST00000434452 PES1O00541 588 aaKnown RBP11.75□□□□□ -0.53
DSC3-202ENST00000434452 HIRIP3Q9BW71 556 aaPredicted RBP11.74□□□□□ -0.53
DSC3-202ENST00000434452 RGS3P49796 1198 aa11.74□□□□□ -0.53
DSC3-202ENST00000434452 CCDC34Q96HJ3 373 aa11.74□□□□□ -0.53
DSC3-202ENST00000434452 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
DSC3-202ENST00000434452 NOL10Q9BSC4 688 aaKnown RBP11.73□□□□□ -0.53
DSC3-202ENST00000434452 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
DSC3-202ENST00000434452 R3HCC1Q9Y3T6 440 aaKnown RBP11.73□□□□□ -0.53
DSC3-202ENST00000434452 CCDC43Q96MW1 224 aaKnown RBP11.73□□□□□ -0.53
DSC3-202ENST00000434452 NAP1L5Q96NT1 182 aaPredicted RBP11.73□□□□□ -0.53
DSC3-202ENST00000434452 SYTL4Q96C24 671 aaPredicted RBP11.72□□□□□ -0.53
DSC3-202ENST00000434452 MTUS2Q5JR59 1369 aa11.72□□□□□ -0.53
DSC3-202ENST00000434452 PATL2C9JE40 543 aaKnown RBP11.72□□□□□ -0.53
DSC3-202ENST00000434452 DHX16O60231 1041 aaKnown RBP11.71□□□□□ -0.53
DSC3-202ENST00000434452 GGT6Q6P531 493 aa11.7□□□□□ -0.54
DSC3-202ENST00000434452 LTV1Q96GA3 475 aaPredicted RBP11.69□□□□□ -0.54
DSC3-202ENST00000434452 AMOTL1Q8IY63 956 aa11.68□□□□□ -0.54
DSC3-202ENST00000434452 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
DSC3-202ENST00000434452 TPM4P67936 248 aa11.67□□□□□ -0.54
DSC3-202ENST00000434452 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
DSC3-202ENST00000434452 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
DSC3-202ENST00000434452 CSRNP3Q8WYN3 585 aa11.66□□□□□ -0.54
DSC3-202ENST00000434452 WWC2Q6AWC2 1192 aa11.66□□□□□ -0.54
DSC3-202ENST00000434452 GOLGA6L1Q8N7Z2 621 aa11.66□□□□□ -0.54
DSC3-202ENST00000434452 TPM3P06753 285 aa11.66□□□□□ -0.54
DSC3-202ENST00000434452 MS4A1P11836 297 aa11.66□□□□□ -0.54
DSC3-202ENST00000434452 CC2D1BQ5T0F9 858 aaKnown RBP11.66□□□□□ -0.54
DSC3-202ENST00000434452 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.65□□□□□ -0.54
DSC3-202ENST00000434452 CCDC97Q96F63 343 aaPredicted RBP11.65□□□□□ -0.54
DSC3-202ENST00000434452 EID1Q9Y6B2 187 aa11.65□□□□□ -0.54
DSC3-202ENST00000434452 IBSPP21815 317 aaPredicted RBP11.65□□□□□ -0.54
DSC3-202ENST00000434452 SPRYD3Q8NCJ5 442 aa11.65□□□□□ -0.54
DSC3-202ENST00000434452 NGDNQ8NEJ9 315 aaKnown RBP11.65□□□□□ -0.54
DSC3-202ENST00000434452 CARD11Q9BXL7 1154 aa11.65□□□□□ -0.54
DSC3-202ENST00000434452 HTATSF1O43719 755 aaKnown RBP11.65□□□□□ -0.55
DSC3-202ENST00000434452 NUTM2FA1L443 756 aa11.64□□□□□ -0.55
DSC3-202ENST00000434452 AK7Q96M32 723 aa11.64□□□□□ -0.55
DSC3-202ENST00000434452 SLC4A3P48751 1232 aa11.64□□□□□ -0.55
DSC3-202ENST00000434452 TPD52L1Q16890 204 aaPredicted RBP11.64□□□□□ -0.55
DSC3-202ENST00000434452 CFDP1Q9UEE9 299 aaPredicted RBP11.63□□□□□ -0.55
DSC3-202ENST00000434452 VPS37DQ86XT2 251 aa11.63□□□□□ -0.55
DSC3-202ENST00000434452 AKAP17AQ02040 695 aaKnown RBP11.63□□□□□ -0.55
DSC3-202ENST00000434452 HDGFL2Q7Z4V5 671 aaPredicted RBP11.63□□□□□ -0.55
DSC3-202ENST00000434452 GPATCH3Q96I76 525 aa11.63□□□□□ -0.55
DSC3-202ENST00000434452 HSCBQ8IWL3 235 aa11.62□□□□□ -0.55
DSC3-202ENST00000434452 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
DSC3-202ENST00000434452 ODF2Q5BJF6 829 aa11.61□□□□□ -0.55
DSC3-202ENST00000434452 STK31Q9BXU1 1019 aa11.61□□□□□ -0.55
DSC3-202ENST00000434452 RBM33Q96EV2 1170 aaKnown RBP11.6□□□□□ -0.55
DSC3-202ENST00000434452 MORC1Q86VD1 984 aa11.6□□□□□ -0.55
DSC3-202ENST00000434452 NGEFQ8N5V2 710 aa11.6□□□□□ -0.55
DSC3-202ENST00000434452 ZFYVE27Q5T4F4 411 aa11.59□□□□□ -0.55
DSC3-202ENST00000434452 TRIM6-TRIM34B2RNG4 842 aa11.59□□□□□ -0.55
DSC3-202ENST00000434452 MSNP26038 577 aaKnown RBP11.59□□□□□ -0.55
DSC3-202ENST00000434452 CT47A1Q5JQC4 288 aaPredicted RBP11.59□□□□□ -0.55
DSC3-202ENST00000434452 TSR1Q2NL82 804 aaKnown RBP11.58□□□□□ -0.56
DSC3-202ENST00000434452 SPAG9O60271 1321 aaKnown RBP11.58□□□□□ -0.56
DSC3-202ENST00000434452 KANK1Q14678 1352 aa11.58□□□□□ -0.56
DSC3-202ENST00000434452 ARID3AQ99856 593 aa11.58□□□□□ -0.56
DSC3-202ENST00000434452 AMPHP49418 695 aa11.58□□□□□ -0.56
DSC3-202ENST00000434452 ERCC6Q03468 1493 aa11.58□□□□□ -0.56
DSC3-202ENST00000434452 SF3A1Q15459 793 aaKnown RBP11.58□□□□□ -0.56
DSC3-202ENST00000434452 TNNT3P45378 269 aaPredicted RBP11.57□□□□□ -0.56
DSC3-202ENST00000434452 PCMTD1Q96MG8 357 aaPredicted RBP11.57□□□□□ -0.56
DSC3-202ENST00000434452 TPM2P07951 284 aa11.57□□□□□ -0.56
DSC3-202ENST00000434452 IKQ13123 557 aaPredicted RBP11.57□□□□□ -0.56
DSC3-202ENST00000434452 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
DSC3-202ENST00000434452 TMEM87AQ8NBN3 555 aa11.57□□□□□ -0.56
DSC3-202ENST00000434452 RRP12Q5JTH9 1297 aaKnown RBP11.56□□□□□ -0.56
DSC3-202ENST00000434452 CHMP4AQ9BY43 222 aa11.56□□□□□ -0.56
DSC3-202ENST00000434452 NOL8Q76FK4 1167 aaKnown RBP11.55□□□□□ -0.56
DSC3-202ENST00000434452 HDAC5Q9UQL6 1122 aa11.54□□□□□ -0.56
DSC3-202ENST00000434452 SYNE3Q6ZMZ3 975 aa11.54□□□□□ -0.56
DSC3-202ENST00000434452 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
DSC3-202ENST00000434452 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
DSC3-202ENST00000434452 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
DSC3-202ENST00000434452 PLCD3Q8N3E9 789 aa11.51□□□□□ -0.57
DSC3-202ENST00000434452 APPP05067 770 aa11.51□□□□□ -0.57
DSC3-202ENST00000434452 MTMR7Q9Y216 660 aa11.51□□□□□ -0.57
DSC3-202ENST00000434452 CCAR2Q8N163 923 aaKnown RBP11.51□□□□□ -0.57
DSC3-202ENST00000434452 C1orf141Q5JVX7 400 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms