RNA–Protein interactions for RNA: ENST00000434214.1

TMEM38B-203, Transcript of transmembrane protein 38B, humanhuman

TSL 2

Gene TMEM38B, Length 502 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-203ENST00000434214 LRRIQ1Q96JM4 1722 aa17.09■□□□□ 0.33
TMEM38B-203ENST00000434214 KIF14Q15058 1648 aa17.08■□□□□ 0.32
TMEM38B-203ENST00000434214 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
TMEM38B-203ENST00000434214 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
TMEM38B-203ENST00000434214 POGZQ7Z3K3 1410 aa17.07■□□□□ 0.32
TMEM38B-203ENST00000434214 MAGI2Q86UL8 1455 aa17.06■□□□□ 0.32
TMEM38B-203ENST00000434214 SCAPERQ9BY12 1400 aa17.05■□□□□ 0.32
TMEM38B-203ENST00000434214 FER1L4A9Z1Z3 1794 aa17.03■□□□□ 0.32
TMEM38B-203ENST00000434214 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
TMEM38B-203ENST00000434214 TROQ12816 1431 aaPredicted RBP17.02■□□□□ 0.31
TMEM38B-203ENST00000434214 CDC42BPBQ9Y5S2 1711 aa16.99■□□□□ 0.31
TMEM38B-203ENST00000434214 EFCAB2Q5VUJ9 269 aa16.98■□□□□ 0.31
TMEM38B-203ENST00000434214 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
TMEM38B-203ENST00000434214 C9orf84Q5VXU9 1444 aa16.97■□□□□ 0.31
TMEM38B-203ENST00000434214 ARHGAP5Q13017 1502 aa16.97■□□□□ 0.31
TMEM38B-203ENST00000434214 ARHGEF12Q9NZN5 1544 aa16.97■□□□□ 0.31
TMEM38B-203ENST00000434214 ATP10AO60312 1499 aa16.97■□□□□ 0.31
TMEM38B-203ENST00000434214 KDM5CP41229 1560 aa16.97■□□□□ 0.31
TMEM38B-203ENST00000434214 MLECQ14165 292 aa16.96■□□□□ 0.31
TMEM38B-203ENST00000434214 CLIP1P30622 1438 aa16.96■□□□□ 0.3
TMEM38B-203ENST00000434214 ZNF518AQ6AHZ1 1483 aa16.95■□□□□ 0.3
TMEM38B-203ENST00000434214 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
TMEM38B-203ENST00000434214 FBXO41Q8TF61 875 aa16.94■□□□□ 0.3
TMEM38B-203ENST00000434214 PREX2Q70Z35 1606 aa16.94■□□□□ 0.3
TMEM38B-203ENST00000434214 HSPA2P54652 639 aa16.93■□□□□ 0.3
TMEM38B-203ENST00000434214 CASKIN1Q8WXD9 1431 aa16.93■□□□□ 0.3
TMEM38B-203ENST00000434214 DIP2CQ9Y2E4 1556 aa16.93■□□□□ 0.3
TMEM38B-203ENST00000434214 CCDC18Q5T9S5 1454 aa16.92■□□□□ 0.3
TMEM38B-203ENST00000434214 ABCA6Q8N139 1617 aa16.91■□□□□ 0.3
TMEM38B-203ENST00000434214 ITSN2Q9NZM3 1697 aa16.91■□□□□ 0.3
TMEM38B-203ENST00000434214 ABCC1P33527 1531 aa16.91■□□□□ 0.3
TMEM38B-203ENST00000434214 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
TMEM38B-203ENST00000434214 CDC42BPAQ5VT25 1732 aa16.9■□□□□ 0.3
TMEM38B-203ENST00000434214 REREQ9P2R6 1566 aa16.89■□□□□ 0.3
TMEM38B-203ENST00000434214 PREX1Q8TCU6 1659 aa16.89■□□□□ 0.29
TMEM38B-203ENST00000434214 TRAPPC8Q9Y2L5 1435 aa16.87■□□□□ 0.29
TMEM38B-203ENST00000434214 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
TMEM38B-203ENST00000434214 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
TMEM38B-203ENST00000434214 KIDINS220Q9ULH0 1771 aa16.84■□□□□ 0.29
TMEM38B-203ENST00000434214 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
TMEM38B-203ENST00000434214 C3P01024 1663 aa16.82■□□□□ 0.28
TMEM38B-203ENST00000434214 AGLP35573 1532 aa16.82■□□□□ 0.28
TMEM38B-203ENST00000434214 SAMD9LQ8IVG5 1584 aa16.81■□□□□ 0.28
TMEM38B-203ENST00000434214 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
TMEM38B-203ENST00000434214 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
TMEM38B-203ENST00000434214 STRCQ7RTU9 1775 aa16.8■□□□□ 0.28
TMEM38B-203ENST00000434214 SYCP2Q9BX26 1530 aa16.78■□□□□ 0.28
TMEM38B-203ENST00000434214 GPATCH8Q9UKJ3 1502 aaKnown RBP16.78■□□□□ 0.28
TMEM38B-203ENST00000434214 UHRF1BP1Q6BDS2 1440 aa16.76■□□□□ 0.27
TMEM38B-203ENST00000434214 CERKQ8TCT0 537 aa16.73■□□□□ 0.27
TMEM38B-203ENST00000434214 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
TMEM38B-203ENST00000434214 INO80Q9ULG1 1556 aaPredicted RBP16.72■□□□□ 0.27
TMEM38B-203ENST00000434214 SUPT6HQ7KZ85 1726 aaKnown RBP16.72■□□□□ 0.27
TMEM38B-203ENST00000434214 MROH2AA6NES4 1674 aa16.72■□□□□ 0.27
TMEM38B-203ENST00000434214 ATP7AQ04656 1500 aa16.71■□□□□ 0.27
TMEM38B-203ENST00000434214 PLXNC1O60486 1568 aa16.7■□□□□ 0.26
TMEM38B-203ENST00000434214 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
TMEM38B-203ENST00000434214 KIAA1107Q9UPP5 1409 aa16.69■□□□□ 0.26
TMEM38B-203ENST00000434214 PLEKHH2Q8IVE3 1493 aa16.68■□□□□ 0.26
TMEM38B-203ENST00000434214 HNRNPMP52272 730 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMEM38B-203ENST00000434214 ESF1Q9H501 851 aaKnown RBP16.68■□□□□ 0.26
TMEM38B-203ENST00000434214 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
TMEM38B-203ENST00000434214 TIAM1Q13009 1591 aa16.68■□□□□ 0.26
TMEM38B-203ENST00000434214 SPAG9O60271 1321 aaKnown RBP16.68■□□□□ 0.26
TMEM38B-203ENST00000434214 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
TMEM38B-203ENST00000434214 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
TMEM38B-203ENST00000434214 CLTCQ00610 1675 aaKnown RBP16.66■□□□□ 0.26
TMEM38B-203ENST00000434214 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
TMEM38B-203ENST00000434214 EHBP1L1Q8N3D4 1523 aa16.65■□□□□ 0.26
TMEM38B-203ENST00000434214 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
TMEM38B-203ENST00000434214 A2MP01023 1474 aa16.65■□□□□ 0.26
TMEM38B-203ENST00000434214 PTPRTO14522 1441 aa16.64■□□□□ 0.25
TMEM38B-203ENST00000434214 ADGBQ8N7X0 1667 aa16.64■□□□□ 0.25
TMEM38B-203ENST00000434214 NPATQ14207 1427 aa16.63■□□□□ 0.25
TMEM38B-203ENST00000434214 NCOA1Q15788 1441 aa16.63■□□□□ 0.25
TMEM38B-203ENST00000434214 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
TMEM38B-203ENST00000434214 ZMYM3Q14202 1370 aa16.62■□□□□ 0.25
TMEM38B-203ENST00000434214 MYO3AQ8NEV4 1616 aa16.61■□□□□ 0.25
TMEM38B-203ENST00000434214 MBD5Q9P267 1494 aa16.61■□□□□ 0.25
TMEM38B-203ENST00000434214 CAMSAP1Q5T5Y3 1602 aa16.6■□□□□ 0.25
TMEM38B-203ENST00000434214 LTBP4Q8N2S1 1624 aa16.6■□□□□ 0.25
TMEM38B-203ENST00000434214 ZNF142P52746 1687 aaPredicted RBP16.6■□□□□ 0.25
TMEM38B-203ENST00000434214 ZNF644Q9H582 1327 aaPredicted RBP16.6■□□□□ 0.25
TMEM38B-203ENST00000434214 PTPRKQ15262 1439 aa16.57■□□□□ 0.24
TMEM38B-203ENST00000434214 CEP170BQ9Y4F5 1589 aaPredicted RBP16.55■□□□□ 0.24
TMEM38B-203ENST00000434214 GGT6Q6P531 493 aa16.55■□□□□ 0.24
TMEM38B-203ENST00000434214 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
TMEM38B-203ENST00000434214 FOXD1Q16676 465 aa16.54■□□□□ 0.24
TMEM38B-203ENST00000434214 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
TMEM38B-203ENST00000434214 CAMSAP2Q08AD1 1489 aa16.53■□□□□ 0.24
TMEM38B-203ENST00000434214 PLA2R1Q13018 1463 aa16.52■□□□□ 0.23
TMEM38B-203ENST00000434214 CCDC141Q6ZP82 1450 aa16.52■□□□□ 0.23
TMEM38B-203ENST00000434214 IQSEC2Q5JU85 1478 aa16.51■□□□□ 0.23
TMEM38B-203ENST00000434214 NCKAP5LQ9HCH0 1330 aa16.5■□□□□ 0.23
TMEM38B-203ENST00000434214 TCOF1Q13428 1488 aaKnown RBP16.5■□□□□ 0.23
TMEM38B-203ENST00000434214 DHX29Q7Z478 1369 aaKnown RBP16.5■□□□□ 0.23
TMEM38B-203ENST00000434214 VPS8Q8N3P4 1428 aa16.49■□□□□ 0.23
TMEM38B-203ENST00000434214 PPP6R1Q9UPN7 881 aa16.49■□□□□ 0.23
TMEM38B-203ENST00000434214 DNMT1P26358 1616 aaKnown RBP16.48■□□□□ 0.23
TMEM38B-203ENST00000434214 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms