RNA–Protein interactions for RNA: ENST00000434073.1

PCDH9-AS3-201, PCDH9 antisense RNA 3, humanhuman

TSL 2 BASIC

Gene PCDH9-AS3, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS3-201ENST00000434073 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
PCDH9-AS3-201ENST00000434073 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.53
PCDH9-AS3-201ENST00000434073 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
PCDH9-AS3-201ENST00000434073 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
PCDH9-AS3-201ENST00000434073 GPHNQ9NQX3 736 aaPredicted RBP11.73□□□□□ -0.53
PCDH9-AS3-201ENST00000434073 TSHZ2Q9NRE2 1034 aa11.73□□□□□ -0.53
PCDH9-AS3-201ENST00000434073 C2orf72A6NCS6 295 aa11.72□□□□□ -0.53
PCDH9-AS3-201ENST00000434073 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
PCDH9-AS3-201ENST00000434073 PDE4AP27815 886 aa11.7□□□□□ -0.54
PCDH9-AS3-201ENST00000434073 FOXK1P85037 733 aa11.68□□□□□ -0.54
PCDH9-AS3-201ENST00000434073 MFSD10Q14728 455 aa11.68□□□□□ -0.54
PCDH9-AS3-201ENST00000434073 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
PCDH9-AS3-201ENST00000434073 DSG2Q14126 1118 aa11.65□□□□□ -0.54
PCDH9-AS3-201ENST00000434073 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
PCDH9-AS3-201ENST00000434073 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
PCDH9-AS3-201ENST00000434073 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
PCDH9-AS3-201ENST00000434073 SNPHO15079 494 aa11.61□□□□□ -0.55
PCDH9-AS3-201ENST00000434073 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
PCDH9-AS3-201ENST00000434073 PLPP6Q8IY26 295 aa11.6□□□□□ -0.55
PCDH9-AS3-201ENST00000434073 SLC34A2O95436 690 aa11.57□□□□□ -0.56
PCDH9-AS3-201ENST00000434073 DOK7Q18PE1 504 aa11.57□□□□□ -0.56
PCDH9-AS3-201ENST00000434073 CAMK2BQ13554 666 aa11.54□□□□□ -0.56
PCDH9-AS3-201ENST00000434073 VSIG10Q8N0Z9 540 aa11.54□□□□□ -0.56
PCDH9-AS3-201ENST00000434073 ZSWIM6Q9HCJ5 1215 aa11.53□□□□□ -0.56
PCDH9-AS3-201ENST00000434073 WDR70Q9NW82 654 aa11.53□□□□□ -0.56
PCDH9-AS3-201ENST00000434073 PTCD2Q8WV60 388 aaKnown RBP11.51□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 RIMBP2O15034 1052 aa11.5□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 LCE2DQ5TA82 110 aaPredicted RBP11.48□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 ZNF710Q8N1W2 664 aa11.48□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 ST18O60284 1047 aa11.47□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 E2F4Q16254 413 aa11.47□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
PCDH9-AS3-201ENST00000434073 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 PCDHGA4Q9Y5G9 962 aa11.45□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 HOXB1P14653 301 aaPredicted RBP11.44□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 TBC1D12O60347 775 aa11.41□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 P3H3Q8IVL6 736 aa11.41□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 UPF1Q92900 1129 aaKnown RBP eCLIP11.41□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 KDM4FA0A1W2PPD8 638 aa11.4□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 ARSIQ5FYB1 569 aa11.4□□□□□ -0.58
PCDH9-AS3-201ENST00000434073 KHSRPQ92945 711 aaKnown RBP eCLIP11.37□□□□□ -0.59
PCDH9-AS3-201ENST00000434073 DPYSL4O14531 572 aa11.36□□□□□ -0.59
PCDH9-AS3-201ENST00000434073 MAP3K9P80192 1104 aa11.36□□□□□ -0.59
PCDH9-AS3-201ENST00000434073 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
PCDH9-AS3-201ENST00000434073 NUDT7P0C024 238 aa11.35□□□□□ -0.59
PCDH9-AS3-201ENST00000434073 PDIA6Q15084 440 aa11.34□□□□□ -0.59
PCDH9-AS3-201ENST00000434073 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.6
PCDH9-AS3-201ENST00000434073 EVI5O60447 810 aa11.32□□□□□ -0.6
PCDH9-AS3-201ENST00000434073 EMP3P54852 163 aa11.32□□□□□ -0.6
PCDH9-AS3-201ENST00000434073 MARVELD3Q96A59 401 aa11.32□□□□□ -0.6
PCDH9-AS3-201ENST00000434073 ZNF316A6NFI3 1004 aaPredicted RBP11.31□□□□□ -0.6
PCDH9-AS3-201ENST00000434073 SPDYE16A6NNV3 312 aaPredicted RBP11.31□□□□□ -0.6
PCDH9-AS3-201ENST00000434073 LHX6Q9UPM6 363 aa11.28□□□□□ -0.6
PCDH9-AS3-201ENST00000434073 PTGER2P43116 358 aa11.26□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 PSDA5PKW4 1024 aaPredicted RBP11.25□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 POTEMA6NI47 508 aa11.24□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 ERBB3P21860 1342 aa11.24□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 FAM205CA6NFA0 338 aa11.22□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 VARS2Q5ST30 1063 aaKnown RBP11.22□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 POTEB3A0JP26 581 aa11.21□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 FOSBP53539 338 aa11.21□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 POTEBQ6S5H4 581 aa11.21□□□□□ -0.61
PCDH9-AS3-201ENST00000434073 PHF14O94880 888 aa11.18□□□□□ -0.62
PCDH9-AS3-201ENST00000434073 PPP4R3BQ5MIZ7 849 aa11.18□□□□□ -0.62
PCDH9-AS3-201ENST00000434073 ZNF454Q8N9F8 522 aa11.17□□□□□ -0.62
PCDH9-AS3-201ENST00000434073 PCDHGA10Q9Y5H3 936 aa11.17□□□□□ -0.62
PCDH9-AS3-201ENST00000434073 SEMA3EO15041 775 aa11.15□□□□□ -0.62
PCDH9-AS3-201ENST00000434073 ZNF687Q8N1G0 1237 aa11.15□□□□□ -0.62
PCDH9-AS3-201ENST00000434073 DDX12PQ92771 950 aa11.15□□□□□ -0.62
PCDH9-AS3-201ENST00000434073 EPAS1Q99814 870 aa11.15□□□□□ -0.62
PCDH9-AS3-201ENST00000434073 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 FBXW7Q969H0 707 aa11.14□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 TYW1BQ6NUM6 668 aa11.13□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 ZDHHC16Q969W1 377 aa11.13□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 MLLT3P42568 568 aaPredicted RBP11.12□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 PBX2P40425 430 aa11.11□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 BCL2L12Q9HB09 334 aa11.11□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 OSBPP22059 807 aa11.1□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 NBR1Q14596 966 aa11.1□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 GRXCR2A6NFK2 248 aa11.09□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 EN1Q05925 392 aaPredicted RBP11.09□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
PCDH9-AS3-201ENST00000434073 POTEEQ6S8J3 1075 aa11.08□□□□□ -0.64
PCDH9-AS3-201ENST00000434073 CDAN1Q8IWY9 1227 aa11.08□□□□□ -0.64
PCDH9-AS3-201ENST00000434073 PCDH10Q9P2E7 1040 aa11.08□□□□□ -0.64
PCDH9-AS3-201ENST00000434073 PRIM1P49642 420 aaKnown RBP11.06□□□□□ -0.64
PCDH9-AS3-201ENST00000434073 ARHGAP33O14559 1287 aa11.05□□□□□ -0.64
PCDH9-AS3-201ENST00000434073 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
PCDH9-AS3-201ENST00000434073 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
PCDH9-AS3-201ENST00000434073 SMYD5Q6GMV2 418 aa11.04□□□□□ -0.64
PCDH9-AS3-201ENST00000434073 PTPREP23469 700 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms