RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 ARHGAP5Q13017 1502 aa35.63■■■■□ 3.29
SEMA3B-205ENST00000434030 ARHGEF40Q8TER5 1519 aa35.63■■■■□ 3.29
SEMA3B-205ENST00000434030 POGZQ7Z3K3 1410 aa35.59■■■■□ 3.29
SEMA3B-205ENST00000434030 PREX2Q70Z35 1606 aa35.59■■■■□ 3.29
SEMA3B-205ENST00000434030 LOC105371045A0A1W2PR82 267 aa35.59■■■■□ 3.29
SEMA3B-205ENST00000434030 CDC42BPAQ5VT25 1732 aa35.58■■■■□ 3.29
SEMA3B-205ENST00000434030 ADAMTSL3P82987 1691 aa35.56■■■■□ 3.28
SEMA3B-205ENST00000434030 MAGI2Q86UL8 1455 aa35.56■■■■□ 3.28
SEMA3B-205ENST00000434030 BCORL1Q5H9F3 1711 aa35.55■■■■□ 3.28
SEMA3B-205ENST00000434030 ZFYVE16Q7Z3T8 1539 aa35.55■■■■□ 3.28
SEMA3B-205ENST00000434030 YEATS2Q9ULM3 1422 aa35.53■■■■□ 3.28
SEMA3B-205ENST00000434030 ARID4BQ4LE39 1312 aaPredicted RBP35.52■■■■□ 3.28
SEMA3B-205ENST00000434030 SIGLEC1Q9BZZ2 1709 aa35.47■■■■□ 3.27
SEMA3B-205ENST00000434030 ZNF518AQ6AHZ1 1483 aa35.46■■■■□ 3.27
SEMA3B-205ENST00000434030 AFAP1Q8N556 730 aa35.43■■■■□ 3.26
SEMA3B-205ENST00000434030 KDM5CP41229 1560 aa35.42■■■■□ 3.26
SEMA3B-205ENST00000434030 MTUS2Q5JR59 1369 aa35.42■■■■□ 3.26
SEMA3B-205ENST00000434030 ITSN2Q9NZM3 1697 aa35.42■■■■□ 3.26
SEMA3B-205ENST00000434030 ABCC1P33527 1531 aa35.42■■■■□ 3.26
SEMA3B-205ENST00000434030 MADDQ8WXG6 1647 aa35.41■■■■□ 3.26
SEMA3B-205ENST00000434030 GPATCH8Q9UKJ3 1502 aaKnown RBP35.4■■■■□ 3.26
SEMA3B-205ENST00000434030 ARHGEF12Q9NZN5 1544 aa35.39■■■■□ 3.26
SEMA3B-205ENST00000434030 ATP10AO60312 1499 aa35.37■■■■□ 3.25
SEMA3B-205ENST00000434030 PTPRMP28827 1452 aa35.37■■■■□ 3.25
SEMA3B-205ENST00000434030 HECW2Q9P2P5 1572 aa35.34■■■■□ 3.25
SEMA3B-205ENST00000434030 TRAPPC8Q9Y2L5 1435 aa35.34■■■■□ 3.25
SEMA3B-205ENST00000434030 SAMD9LQ8IVG5 1584 aa35.34■■■■□ 3.25
SEMA3B-205ENST00000434030 EHBP1L1Q8N3D4 1523 aa35.33■■■■□ 3.25
SEMA3B-205ENST00000434030 ZNF777Q9ULD5 760 aaPredicted RBP35.32■■■■□ 3.24
SEMA3B-205ENST00000434030 RIMS1Q86UR5 1692 aaKnown RBP35.32■■■■□ 3.24
SEMA3B-205ENST00000434030 C9orf84Q5VXU9 1444 aa35.32■■■■□ 3.24
SEMA3B-205ENST00000434030 CCNB3Q8WWL7 1395 aa35.31■■■■□ 3.24
SEMA3B-205ENST00000434030 MYT1LQ9UL68 1186 aa35.3■■■■□ 3.24
SEMA3B-205ENST00000434030 MLH3Q9UHC1 1453 aa35.29■■■■□ 3.24
SEMA3B-205ENST00000434030 VPS8Q8N3P4 1428 aa35.27■■■■□ 3.24
SEMA3B-205ENST00000434030 DIP2CQ9Y2E4 1556 aa35.26■■■■□ 3.24
SEMA3B-205ENST00000434030 CFDP1Q9UEE9 299 aaPredicted RBP35.26■■■■□ 3.24
SEMA3B-205ENST00000434030 TIAM1Q13009 1591 aa35.25■■■■□ 3.23
SEMA3B-205ENST00000434030 ABCA6Q8N139 1617 aa35.24■■■■□ 3.23
SEMA3B-205ENST00000434030 KIDINS220Q9ULH0 1771 aa35.24■■■■□ 3.23
SEMA3B-205ENST00000434030 MLECQ14165 292 aa35.24■■■■□ 3.23
SEMA3B-205ENST00000434030 SYCP2Q9BX26 1530 aa35.23■■■■□ 3.23
SEMA3B-205ENST00000434030 FER1L4A9Z1Z3 1794 aa35.23■■■■□ 3.23
SEMA3B-205ENST00000434030 HNRNPMP52272 730 aaKnown RBP eCLIP35.2■■■■□ 3.23
SEMA3B-205ENST00000434030 SUPT6HQ7KZ85 1726 aaKnown RBP35.19■■■■□ 3.22
SEMA3B-205ENST00000434030 REREQ9P2R6 1566 aa35.19■■■■□ 3.22
SEMA3B-205ENST00000434030 KIAA1107Q9UPP5 1409 aa35.18■■■■□ 3.22
SEMA3B-205ENST00000434030 PLEKHH2Q8IVE3 1493 aa35.17■■■■□ 3.22
SEMA3B-205ENST00000434030 NCOA2Q15596 1464 aa35.12■■■■□ 3.21
SEMA3B-205ENST00000434030 ZNF644Q9H582 1327 aaPredicted RBP35.09■■■■□ 3.21
SEMA3B-205ENST00000434030 SPAG9O60271 1321 aaKnown RBP35.08■■■■□ 3.21
SEMA3B-205ENST00000434030 LRRC9Q6ZRR7 1453 aa35.08■■■■□ 3.21
SEMA3B-205ENST00000434030 AGLP35573 1532 aa35.06■■■■□ 3.2
SEMA3B-205ENST00000434030 PLPPR3Q6T4P5 718 aa35.06■■■■□ 3.2
SEMA3B-205ENST00000434030 MAP3K1Q13233 1512 aa35.06■■■■□ 3.2
SEMA3B-205ENST00000434030 ATP7AQ04656 1500 aa35.04■■■■□ 3.2
SEMA3B-205ENST00000434030 INO80Q9ULG1 1556 aaPredicted RBP35.04■■■■□ 3.2
SEMA3B-205ENST00000434030 MBD5Q9P267 1494 aa35.02■■■■□ 3.2
SEMA3B-205ENST00000434030 KANK4Q5T7N3 995 aaPredicted RBP34.99■■■■□ 3.19
SEMA3B-205ENST00000434030 LMTK3Q96Q04 1460 aa34.97■■■■□ 3.19
SEMA3B-205ENST00000434030 CAMSAP2Q08AD1 1489 aa34.94■■■■□ 3.18
SEMA3B-205ENST00000434030 CEBPAP49715 358 aaPredicted RBP34.92■■■■□ 3.18
SEMA3B-205ENST00000434030 ADGBQ8N7X0 1667 aa34.92■■■■□ 3.18
SEMA3B-205ENST00000434030 PLXNC1O60486 1568 aa34.89■■■■□ 3.18
SEMA3B-205ENST00000434030 A2MP01023 1474 aa34.89■■■■□ 3.18
SEMA3B-205ENST00000434030 SETD1BQ9UPS6 1966 aaKnown RBP34.88■■■■□ 3.17
SEMA3B-205ENST00000434030 C3P01024 1663 aa34.88■■■■□ 3.17
SEMA3B-205ENST00000434030 RTEL1-TNFRSF6BF6WH68 1400 aa34.87■■■■□ 3.17
SEMA3B-205ENST00000434030 CCDC141Q6ZP82 1450 aa34.85■■■■□ 3.17
SEMA3B-205ENST00000434030 RSPH4AQ5TD94 716 aa34.85■■■■□ 3.17
SEMA3B-205ENST00000434030 ESF1Q9H501 851 aaKnown RBP34.85■■■■□ 3.17
SEMA3B-205ENST00000434030 APLP2Q06481 763 aa34.84■■■■□ 3.17
SEMA3B-205ENST00000434030 PREX1Q8TCU6 1659 aa34.83■■■■□ 3.17
SEMA3B-205ENST00000434030 ARHGEF5Q12774 1597 aa34.82■■■■□ 3.16
SEMA3B-205ENST00000434030 HSPA2P54652 639 aa34.79■■■■□ 3.16
SEMA3B-205ENST00000434030 MYOM3Q5VTT5 1437 aa34.78■■■■□ 3.16
SEMA3B-205ENST00000434030 CNTLNQ9NXG0 1405 aa34.78■■■■□ 3.16
SEMA3B-205ENST00000434030 MROH2AA6NES4 1674 aa34.76■■■■□ 3.16
SEMA3B-205ENST00000434030 MIA2Q96PC5 1412 aa34.75■■■■□ 3.15
SEMA3B-205ENST00000434030 DHX29Q7Z478 1369 aaKnown RBP34.73■■■■□ 3.15
SEMA3B-205ENST00000434030 CLTCQ00610 1675 aaKnown RBP34.73■■■■□ 3.15
SEMA3B-205ENST00000434030 TSPY4P0CV99 314 aa34.71■■■■□ 3.15
SEMA3B-205ENST00000434030 TSPY10P0CW01 314 aa34.71■■■■□ 3.15
SEMA3B-205ENST00000434030 GGT6Q6P531 493 aa34.71■■■■□ 3.15
SEMA3B-205ENST00000434030 ZMYM3Q14202 1370 aa34.66■■■■□ 3.14
SEMA3B-205ENST00000434030 UHRF1BP1Q6BDS2 1440 aa34.65■■■■□ 3.14
SEMA3B-205ENST00000434030 MAST1Q9Y2H9 1570 aa34.65■■■■□ 3.14
SEMA3B-205ENST00000434030 PPP6R1Q9UPN7 881 aa34.64■■■■□ 3.14
SEMA3B-205ENST00000434030 PTPN23Q9H3S7 1636 aa34.61■■■■□ 3.13
SEMA3B-205ENST00000434030 KIF3BO15066 747 aa34.6■■■■□ 3.13
SEMA3B-205ENST00000434030 NPATQ14207 1427 aa34.56■■■■□ 3.12
SEMA3B-205ENST00000434030 STRCQ7RTU9 1775 aa34.55■■■■□ 3.12
SEMA3B-205ENST00000434030 CROCC2H7BZ55 1655 aa34.52■■■■□ 3.12
SEMA3B-205ENST00000434030 FGD6Q6ZV73 1430 aa34.52■■■■□ 3.12
SEMA3B-205ENST00000434030 ILDR1Q86SU0 546 aaPredicted RBP34.5■■■■□ 3.11
SEMA3B-205ENST00000434030 PTPRKQ15262 1439 aa34.49■■■■□ 3.11
SEMA3B-205ENST00000434030 TCOF1Q13428 1488 aaKnown RBP34.48■■■■□ 3.11
SEMA3B-205ENST00000434030 ABCC5O15440 1437 aa34.47■■■■□ 3.11
SEMA3B-205ENST00000434030 FAM135AQ9P2D6 1515 aa34.45■■■■□ 3.11
SEMA3B-205ENST00000434030 DNMT1P26358 1616 aaKnown RBP34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms