RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 POGZQ7Z3K3 1410 aa35.67■■■■□ 3.3
RPUSD3-206ENST00000433535 SCAPERQ9BY12 1400 aa35.67■■■■□ 3.3
RPUSD3-206ENST00000433535 YEATS2Q9ULM3 1422 aa35.67■■■■□ 3.3
RPUSD3-206ENST00000433535 CLIP1P30622 1438 aa35.66■■■■□ 3.3
RPUSD3-206ENST00000433535 CASKIN1Q8WXD9 1431 aa35.66■■■■□ 3.3
RPUSD3-206ENST00000433535 SIGLEC1Q9BZZ2 1709 aa35.64■■■■□ 3.3
RPUSD3-206ENST00000433535 CCDC18Q5T9S5 1454 aa35.6■■■■□ 3.29
RPUSD3-206ENST00000433535 ARHGAP5Q13017 1502 aa35.6■■■■□ 3.29
RPUSD3-206ENST00000433535 MAGI2Q86UL8 1455 aa35.6■■■■□ 3.29
RPUSD3-206ENST00000433535 EFCAB2Q5VUJ9 269 aa35.59■■■■□ 3.29
RPUSD3-206ENST00000433535 RIMS1Q86UR5 1692 aaKnown RBP35.57■■■■□ 3.28
RPUSD3-206ENST00000433535 FYCO1Q9BQS8 1478 aa35.54■■■■□ 3.28
RPUSD3-206ENST00000433535 CDC42BPBQ9Y5S2 1711 aa35.52■■■■□ 3.28
RPUSD3-206ENST00000433535 PREX2Q70Z35 1606 aa35.5■■■■□ 3.27
RPUSD3-206ENST00000433535 ZNF518AQ6AHZ1 1483 aa35.47■■■■□ 3.27
RPUSD3-206ENST00000433535 KDM5CP41229 1560 aa35.45■■■■□ 3.27
RPUSD3-206ENST00000433535 ATP10AO60312 1499 aa35.42■■■■□ 3.26
RPUSD3-206ENST00000433535 C9orf84Q5VXU9 1444 aa35.41■■■■□ 3.26
RPUSD3-206ENST00000433535 CDC42BPAQ5VT25 1732 aa35.4■■■■□ 3.26
RPUSD3-206ENST00000433535 MLECQ14165 292 aa35.4■■■■□ 3.26
RPUSD3-206ENST00000433535 FER1L4A9Z1Z3 1794 aa35.4■■■■□ 3.26
RPUSD3-206ENST00000433535 ABCC1P33527 1531 aa35.39■■■■□ 3.26
RPUSD3-206ENST00000433535 AFAP1Q8N556 730 aa35.39■■■■□ 3.26
RPUSD3-206ENST00000433535 ITSN2Q9NZM3 1697 aa35.36■■■■□ 3.25
RPUSD3-206ENST00000433535 LMTK3Q96Q04 1460 aa35.35■■■■□ 3.25
RPUSD3-206ENST00000433535 ARHGEF12Q9NZN5 1544 aa35.34■■■■□ 3.25
RPUSD3-206ENST00000433535 PLPPR3Q6T4P5 718 aa35.34■■■■□ 3.25
RPUSD3-206ENST00000433535 DIP2CQ9Y2E4 1556 aa35.34■■■■□ 3.25
RPUSD3-206ENST00000433535 ABCA6Q8N139 1617 aa35.31■■■■□ 3.24
RPUSD3-206ENST00000433535 TRAPPC8Q9Y2L5 1435 aa35.31■■■■□ 3.24
RPUSD3-206ENST00000433535 ILDR1Q86SU0 546 aaPredicted RBP35.3■■■■□ 3.24
RPUSD3-206ENST00000433535 MYT1LQ9UL68 1186 aa35.29■■■■□ 3.24
RPUSD3-206ENST00000433535 MLH3Q9UHC1 1453 aa35.26■■■■□ 3.23
RPUSD3-206ENST00000433535 SAMD9LQ8IVG5 1584 aa35.24■■■■□ 3.23
RPUSD3-206ENST00000433535 GPATCH8Q9UKJ3 1502 aaKnown RBP35.22■■■■□ 3.23
RPUSD3-206ENST00000433535 REREQ9P2R6 1566 aa35.22■■■■□ 3.23
RPUSD3-206ENST00000433535 CEP162Q5TB80 1403 aa35.21■■■■□ 3.23
RPUSD3-206ENST00000433535 SYCP2Q9BX26 1530 aa35.19■■■■□ 3.22
RPUSD3-206ENST00000433535 KIDINS220Q9ULH0 1771 aa35.19■■■■□ 3.22
RPUSD3-206ENST00000433535 ZNF777Q9ULD5 760 aaPredicted RBP35.18■■■■□ 3.22
RPUSD3-206ENST00000433535 MTUS2Q5JR59 1369 aa35.15■■■■□ 3.22
RPUSD3-206ENST00000433535 HSPA2P54652 639 aa35.13■■■■□ 3.21
RPUSD3-206ENST00000433535 CCNB3Q8WWL7 1395 aa35.11■■■■□ 3.21
RPUSD3-206ENST00000433535 EHBP1L1Q8N3D4 1523 aa35.1■■■■□ 3.21
RPUSD3-206ENST00000433535 AGLP35573 1532 aa35.09■■■■□ 3.21
RPUSD3-206ENST00000433535 CEBPAP49715 358 aaPredicted RBP35.07■■■■□ 3.2
RPUSD3-206ENST00000433535 TIAM1Q13009 1591 aa35.07■■■■□ 3.2
RPUSD3-206ENST00000433535 PREX1Q8TCU6 1659 aa35.06■■■■□ 3.2
RPUSD3-206ENST00000433535 CFDP1Q9UEE9 299 aaPredicted RBP35.06■■■■□ 3.2
RPUSD3-206ENST00000433535 HNRNPMP52272 730 aaKnown RBP eCLIP35.05■■■■□ 3.2
RPUSD3-206ENST00000433535 PLEKHH2Q8IVE3 1493 aa35.03■■■■□ 3.2
RPUSD3-206ENST00000433535 KIAA1107Q9UPP5 1409 aa35.01■■■■□ 3.2
RPUSD3-206ENST00000433535 ATP7AQ04656 1500 aa35.01■■■■□ 3.19
RPUSD3-206ENST00000433535 INO80Q9ULG1 1556 aaPredicted RBP35■■■■□ 3.19
RPUSD3-206ENST00000433535 SPAG9O60271 1321 aaKnown RBP35■■■■□ 3.19
RPUSD3-206ENST00000433535 C3P01024 1663 aa34.99■■■■□ 3.19
RPUSD3-206ENST00000433535 SUPT6HQ7KZ85 1726 aaKnown RBP34.95■■■■□ 3.18
RPUSD3-206ENST00000433535 ZNF644Q9H582 1327 aaPredicted RBP34.92■■■■□ 3.18
RPUSD3-206ENST00000433535 LOC105371045A0A1W2PR82 267 aa34.9■■■■□ 3.18
RPUSD3-206ENST00000433535 ESF1Q9H501 851 aaKnown RBP34.9■■■■□ 3.18
RPUSD3-206ENST00000433535 PLXNC1O60486 1568 aa34.9■■■■□ 3.18
RPUSD3-206ENST00000433535 UHRF1BP1Q6BDS2 1440 aa34.89■■■■□ 3.18
RPUSD3-206ENST00000433535 NCOA2Q15596 1464 aa34.86■■■■□ 3.17
RPUSD3-206ENST00000433535 A2MP01023 1474 aa34.85■■■■□ 3.17
RPUSD3-206ENST00000433535 MBD5Q9P267 1494 aa34.85■■■■□ 3.17
RPUSD3-206ENST00000433535 CNTLNQ9NXG0 1405 aa34.85■■■■□ 3.17
RPUSD3-206ENST00000433535 SETD1BQ9UPS6 1966 aaKnown RBP34.83■■■■□ 3.17
RPUSD3-206ENST00000433535 VPS8Q8N3P4 1428 aa34.82■■■■□ 3.17
RPUSD3-206ENST00000433535 FBXO41Q8TF61 875 aa34.81■■■■□ 3.16
RPUSD3-206ENST00000433535 MROH2AA6NES4 1674 aa34.81■■■■□ 3.16
RPUSD3-206ENST00000433535 ADGBQ8N7X0 1667 aa34.81■■■■□ 3.16
RPUSD3-206ENST00000433535 CAMSAP2Q08AD1 1489 aa34.78■■■■□ 3.16
RPUSD3-206ENST00000433535 STRCQ7RTU9 1775 aa34.77■■■■□ 3.16
RPUSD3-206ENST00000433535 CLTCQ00610 1675 aaKnown RBP34.76■■■■□ 3.16
RPUSD3-206ENST00000433535 CCDC141Q6ZP82 1450 aa34.71■■■■□ 3.15
RPUSD3-206ENST00000433535 LRRC9Q6ZRR7 1453 aa34.71■■■■□ 3.15
RPUSD3-206ENST00000433535 ZMYM3Q14202 1370 aa34.7■■■■□ 3.15
RPUSD3-206ENST00000433535 RTEL1-TNFRSF6BF6WH68 1400 aa34.7■■■■□ 3.15
RPUSD3-206ENST00000433535 NPATQ14207 1427 aa34.67■■■■□ 3.14
RPUSD3-206ENST00000433535 GGT6Q6P531 493 aa34.67■■■■□ 3.14
RPUSD3-206ENST00000433535 ARHGEF5Q12774 1597 aa34.62■■■■□ 3.13
RPUSD3-206ENST00000433535 DHX29Q7Z478 1369 aaKnown RBP34.6■■■■□ 3.13
RPUSD3-206ENST00000433535 MYO3AQ8NEV4 1616 aa34.59■■■■□ 3.13
RPUSD3-206ENST00000433535 MAP3K1Q13233 1512 aa34.59■■■■□ 3.13
RPUSD3-206ENST00000433535 KANK4Q5T7N3 995 aaPredicted RBP34.58■■■■□ 3.13
RPUSD3-206ENST00000433535 CERKQ8TCT0 537 aa34.58■■■■□ 3.13
RPUSD3-206ENST00000433535 DMRT2Q9Y5R5 561 aa34.57■■■■□ 3.12
RPUSD3-206ENST00000433535 PTPRKQ15262 1439 aa34.56■■■■□ 3.12
RPUSD3-206ENST00000433535 NCOA1Q15788 1441 aa34.55■■■■□ 3.12
RPUSD3-206ENST00000433535 ZNF142P52746 1687 aaPredicted RBP34.54■■■■□ 3.12
RPUSD3-206ENST00000433535 CAMSAP1Q5T5Y3 1602 aa34.54■■■■□ 3.12
RPUSD3-206ENST00000433535 RSPH4AQ5TD94 716 aa34.53■■■■□ 3.12
RPUSD3-206ENST00000433535 PTPRTO14522 1441 aa34.52■■■■□ 3.12
RPUSD3-206ENST00000433535 PPP6R1Q9UPN7 881 aa34.5■■■■□ 3.11
RPUSD3-206ENST00000433535 CEP170BQ9Y4F5 1589 aaPredicted RBP34.49■■■■□ 3.11
RPUSD3-206ENST00000433535 KIF3BO15066 747 aa34.49■■■■□ 3.11
RPUSD3-206ENST00000433535 MYOM3Q5VTT5 1437 aa34.47■■■■□ 3.11
RPUSD3-206ENST00000433535 KDM5DQ9BY66 1539 aa34.46■■■■□ 3.11
RPUSD3-206ENST00000433535 MAST1Q9Y2H9 1570 aa34.45■■■■□ 3.1
RPUSD3-206ENST00000433535 TSPY4P0CV99 314 aa34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms