RNA–Protein interactions for RNA: ENST00000433496.5

RFC4-207, Transcript of replication factor C subunit 4, humanhuman

TSL 5 BASIC

Gene RFC4, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-207ENST00000433496 ZFYVE16Q7Z3T8 1539 aa15.59■□□□□ 0.09
RFC4-207ENST00000433496 ARID4BQ4LE39 1312 aaPredicted RBP15.59■□□□□ 0.09
RFC4-207ENST00000433496 BCORL1Q5H9F3 1711 aa15.58■□□□□ 0.08
RFC4-207ENST00000433496 ADAMTSL3P82987 1691 aa15.57■□□□□ 0.08
RFC4-207ENST00000433496 EFCAB2Q5VUJ9 269 aa15.57■□□□□ 0.08
RFC4-207ENST00000433496 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
RFC4-207ENST00000433496 PREX2Q70Z35 1606 aa15.57■□□□□ 0.08
RFC4-207ENST00000433496 SCAPERQ9BY12 1400 aa15.56■□□□□ 0.08
RFC4-207ENST00000433496 MAGI2Q86UL8 1455 aa15.56■□□□□ 0.08
RFC4-207ENST00000433496 CDC42BPBQ9Y5S2 1711 aa15.56■□□□□ 0.08
RFC4-207ENST00000433496 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
RFC4-207ENST00000433496 CDC42BPAQ5VT25 1732 aa15.53■□□□□ 0.08
RFC4-207ENST00000433496 MADDQ8WXG6 1647 aa15.53■□□□□ 0.08
RFC4-207ENST00000433496 ZNF518AQ6AHZ1 1483 aa15.52■□□□□ 0.07
RFC4-207ENST00000433496 RIMS1Q86UR5 1692 aaKnown RBP15.51■□□□□ 0.07
RFC4-207ENST00000433496 ITSN2Q9NZM3 1697 aa15.5■□□□□ 0.07
RFC4-207ENST00000433496 YEATS2Q9ULM3 1422 aa15.5■□□□□ 0.07
RFC4-207ENST00000433496 FER1L4A9Z1Z3 1794 aa15.49■□□□□ 0.07
RFC4-207ENST00000433496 PTPRMP28827 1452 aa15.49■□□□□ 0.07
RFC4-207ENST00000433496 CEP162Q5TB80 1403 aa15.49■□□□□ 0.07
RFC4-207ENST00000433496 MYT1LQ9UL68 1186 aa15.48■□□□□ 0.07
RFC4-207ENST00000433496 KDM5CP41229 1560 aa15.48■□□□□ 0.07
RFC4-207ENST00000433496 ABCC1P33527 1531 aa15.48■□□□□ 0.07
RFC4-207ENST00000433496 SIGLEC1Q9BZZ2 1709 aa15.46■□□□□ 0.07
RFC4-207ENST00000433496 C9orf84Q5VXU9 1444 aa15.46■□□□□ 0.07
RFC4-207ENST00000433496 ATP10AO60312 1499 aa15.46■□□□□ 0.06
RFC4-207ENST00000433496 MTUS2Q5JR59 1369 aa15.45■□□□□ 0.06
RFC4-207ENST00000433496 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
RFC4-207ENST00000433496 DIP2CQ9Y2E4 1556 aa15.42■□□□□ 0.06
RFC4-207ENST00000433496 ABCA6Q8N139 1617 aa15.42■□□□□ 0.06
RFC4-207ENST00000433496 CCNB3Q8WWL7 1395 aa15.41■□□□□ 0.06
RFC4-207ENST00000433496 MLECQ14165 292 aa15.41■□□□□ 0.06
RFC4-207ENST00000433496 AFAP1Q8N556 730 aa15.41■□□□□ 0.06
RFC4-207ENST00000433496 SAMD9LQ8IVG5 1584 aa15.41■□□□□ 0.06
RFC4-207ENST00000433496 ZNF777Q9ULD5 760 aaPredicted RBP15.4■□□□□ 0.06
RFC4-207ENST00000433496 MLH3Q9UHC1 1453 aa15.4■□□□□ 0.06
RFC4-207ENST00000433496 SYCP2Q9BX26 1530 aa15.39■□□□□ 0.05
RFC4-207ENST00000433496 GPATCH8Q9UKJ3 1502 aaKnown RBP15.39■□□□□ 0.05
RFC4-207ENST00000433496 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
RFC4-207ENST00000433496 PLEKHH2Q8IVE3 1493 aa15.39■□□□□ 0.05
RFC4-207ENST00000433496 ARHGEF12Q9NZN5 1544 aa15.38■□□□□ 0.05
RFC4-207ENST00000433496 SUPT6HQ7KZ85 1726 aaKnown RBP15.38■□□□□ 0.05
RFC4-207ENST00000433496 TRAPPC8Q9Y2L5 1435 aa15.38■□□□□ 0.05
RFC4-207ENST00000433496 KIDINS220Q9ULH0 1771 aa15.38■□□□□ 0.05
RFC4-207ENST00000433496 PLPPR3Q6T4P5 718 aa15.37■□□□□ 0.05
RFC4-207ENST00000433496 CFDP1Q9UEE9 299 aaPredicted RBP15.37■□□□□ 0.05
RFC4-207ENST00000433496 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
RFC4-207ENST00000433496 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
RFC4-207ENST00000433496 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
RFC4-207ENST00000433496 SPAG9O60271 1321 aaKnown RBP15.32■□□□□ 0.04
RFC4-207ENST00000433496 VPS8Q8N3P4 1428 aa15.32■□□□□ 0.04
RFC4-207ENST00000433496 KIAA1107Q9UPP5 1409 aa15.32■□□□□ 0.04
RFC4-207ENST00000433496 LMTK3Q96Q04 1460 aa15.32■□□□□ 0.04
RFC4-207ENST00000433496 AGLP35573 1532 aa15.32■□□□□ 0.04
RFC4-207ENST00000433496 INO80Q9ULG1 1556 aaPredicted RBP15.32■□□□□ 0.04
RFC4-207ENST00000433496 LOC105371045A0A1W2PR82 267 aa15.31■□□□□ 0.04
RFC4-207ENST00000433496 ESF1Q9H501 851 aaKnown RBP15.31■□□□□ 0.04
RFC4-207ENST00000433496 HNRNPMP52272 730 aaKnown RBP eCLIP15.3■□□□□ 0.04
RFC4-207ENST00000433496 ADGBQ8N7X0 1667 aa15.3■□□□□ 0.04
RFC4-207ENST00000433496 NCOA2Q15596 1464 aa15.28■□□□□ 0.04
RFC4-207ENST00000433496 C3P01024 1663 aa15.28■□□□□ 0.04
RFC4-207ENST00000433496 SETD1BQ9UPS6 1966 aaKnown RBP15.26■□□□□ 0.03
RFC4-207ENST00000433496 MROH2AA6NES4 1674 aa15.25■□□□□ 0.03
RFC4-207ENST00000433496 CNTLNQ9NXG0 1405 aa15.25■□□□□ 0.03
RFC4-207ENST00000433496 A2MP01023 1474 aa15.24■□□□□ 0.03
RFC4-207ENST00000433496 CAMSAP2Q08AD1 1489 aa15.24■□□□□ 0.03
RFC4-207ENST00000433496 LRRC9Q6ZRR7 1453 aa15.24■□□□□ 0.03
RFC4-207ENST00000433496 PLXNC1O60486 1568 aa15.24■□□□□ 0.03
RFC4-207ENST00000433496 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
RFC4-207ENST00000433496 ZNF644Q9H582 1327 aaPredicted RBP15.22■□□□□ 0.03
RFC4-207ENST00000433496 CCDC141Q6ZP82 1450 aa15.22■□□□□ 0.03
RFC4-207ENST00000433496 UHRF1BP1Q6BDS2 1440 aa15.22■□□□□ 0.03
RFC4-207ENST00000433496 CLTCQ00610 1675 aaKnown RBP15.22■□□□□ 0.03
RFC4-207ENST00000433496 CEBPAP49715 358 aaPredicted RBP15.21■□□□□ 0.03
RFC4-207ENST00000433496 HSPA2P54652 639 aa15.21■□□□□ 0.03
RFC4-207ENST00000433496 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
RFC4-207ENST00000433496 APLP2Q06481 763 aa15.2■□□□□ 0.02
RFC4-207ENST00000433496 RTEL1-TNFRSF6BF6WH68 1400 aa15.19■□□□□ 0.02
RFC4-207ENST00000433496 ARHGEF5Q12774 1597 aa15.19■□□□□ 0.02
RFC4-207ENST00000433496 RSPH4AQ5TD94 716 aa15.17■□□□□ 0.02
RFC4-207ENST00000433496 ILDR1Q86SU0 546 aaPredicted RBP15.16■□□□□ 0.02
RFC4-207ENST00000433496 GGT6Q6P531 493 aa15.14■□□□□ 0.01
RFC4-207ENST00000433496 MYOM3Q5VTT5 1437 aa15.14■□□□□ 0.01
RFC4-207ENST00000433496 TSPY4P0CV99 314 aa15.13■□□□□ 0.01
RFC4-207ENST00000433496 TSPY10P0CW01 314 aa15.13■□□□□ 0.01
RFC4-207ENST00000433496 NPATQ14207 1427 aa15.13■□□□□ 0.01
RFC4-207ENST00000433496 MIA2Q96PC5 1412 aa15.12■□□□□ 0.01
RFC4-207ENST00000433496 STRCQ7RTU9 1775 aa15.12■□□□□ 0.01
RFC4-207ENST00000433496 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
RFC4-207ENST00000433496 DHX29Q7Z478 1369 aaKnown RBP15.11■□□□□ 0.01
RFC4-207ENST00000433496 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
RFC4-207ENST00000433496 MYO3AQ8NEV4 1616 aa15.11■□□□□ 0.01
RFC4-207ENST00000433496 KANK4Q5T7N3 995 aaPredicted RBP15.11■□□□□ 0.01
RFC4-207ENST00000433496 ZNF142P52746 1687 aaPredicted RBP15.1■□□□□ 0.01
RFC4-207ENST00000433496 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
RFC4-207ENST00000433496 FAM135AQ9P2D6 1515 aa15.1■□□□□ 0.01
RFC4-207ENST00000433496 CROCC2H7BZ55 1655 aa15.09■□□□□ 0.01
RFC4-207ENST00000433496 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
RFC4-207ENST00000433496 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
RFC4-207ENST00000433496 PTPN23Q9H3S7 1636 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms