RNA–Protein interactions for RNA: ENST00000433332.7

SRGAP3-203, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 2,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-203ENST00000433332 FGD6Q6ZV73 1430 aa12.47□□□□□ -0.41
SRGAP3-203ENST00000433332 ANP32EQ9BTT0 268 aa12.47□□□□□ -0.41
SRGAP3-203ENST00000433332 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
SRGAP3-203ENST00000433332 MYOM3Q5VTT5 1437 aa12.46□□□□□ -0.41
SRGAP3-203ENST00000433332 ADRA2BP18089 450 aa12.46□□□□□ -0.41
SRGAP3-203ENST00000433332 ADCY10Q96PN6 1610 aa12.42□□□□□ -0.42
SRGAP3-203ENST00000433332 PTPRGP23470 1445 aa12.42□□□□□ -0.42
SRGAP3-203ENST00000433332 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
SRGAP3-203ENST00000433332 PTPN23Q9H3S7 1636 aa12.41□□□□□ -0.42
SRGAP3-203ENST00000433332 FAM50AQ14320 339 aaKnown RBP12.41□□□□□ -0.42
SRGAP3-203ENST00000433332 TROQ12816 1431 aaPredicted RBP12.4□□□□□ -0.42
SRGAP3-203ENST00000433332 TCOF1Q13428 1488 aaKnown RBP12.4□□□□□ -0.42
SRGAP3-203ENST00000433332 MIA2Q96PC5 1412 aa12.39□□□□□ -0.43
SRGAP3-203ENST00000433332 ARID3CA6NKF2 412 aa12.39□□□□□ -0.43
SRGAP3-203ENST00000433332 PKNOX2Q96KN3 472 aa12.39□□□□□ -0.43
SRGAP3-203ENST00000433332 ERCC6L2Q5T890 1561 aa12.38□□□□□ -0.43
SRGAP3-203ENST00000433332 ITGAEP38570 1179 aa12.37□□□□□ -0.43
SRGAP3-203ENST00000433332 ITSN2Q9NZM3 1697 aa12.37□□□□□ -0.43
SRGAP3-203ENST00000433332 ATP10BO94823 1461 aa12.36□□□□□ -0.43
SRGAP3-203ENST00000433332 UACAQ9BZF9 1416 aa12.36□□□□□ -0.43
SRGAP3-203ENST00000433332 KIF14Q15058 1648 aa12.36□□□□□ -0.43
SRGAP3-203ENST00000433332 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
SRGAP3-203ENST00000433332 ABCC2Q92887 1545 aa12.35□□□□□ -0.43
SRGAP3-203ENST00000433332 PDIA4P13667 645 aaKnown RBP12.35□□□□□ -0.43
SRGAP3-203ENST00000433332 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
SRGAP3-203ENST00000433332 CLSPNQ9HAW4 1339 aa12.33□□□□□ -0.44
SRGAP3-203ENST00000433332 DHX57Q6P158 1386 aaKnown RBP12.33□□□□□ -0.44
SRGAP3-203ENST00000433332 RAB3GAP2Q9H2M9 1393 aa12.33□□□□□ -0.44
SRGAP3-203ENST00000433332 ANO8Q9HCE9 1232 aaPredicted RBP12.31□□□□□ -0.44
SRGAP3-203ENST00000433332 UHRF1BP1LA0JNW5 1464 aa12.31□□□□□ -0.44
SRGAP3-203ENST00000433332 HFM1A2PYH4 1435 aa12.3□□□□□ -0.44
SRGAP3-203ENST00000433332 PLEKHD1A6NEE1 506 aa12.3□□□□□ -0.44
SRGAP3-203ENST00000433332 PTPRKQ15262 1439 aa12.29□□□□□ -0.44
SRGAP3-203ENST00000433332 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
SRGAP3-203ENST00000433332 DNMT1P26358 1616 aaKnown RBP12.29□□□□□ -0.44
SRGAP3-203ENST00000433332 ABCC10Q5T3U5 1492 aa12.29□□□□□ -0.44
SRGAP3-203ENST00000433332 GPATCH8Q9UKJ3 1502 aaKnown RBP12.28□□□□□ -0.44
SRGAP3-203ENST00000433332 GCC2Q8IWJ2 1684 aa12.28□□□□□ -0.44
SRGAP3-203ENST00000433332 CDC42BPAQ5VT25 1732 aa12.28□□□□□ -0.44
SRGAP3-203ENST00000433332 NEFLP07196 543 aa12.27□□□□□ -0.44
SRGAP3-203ENST00000433332 CAMSAP2Q08AD1 1489 aa12.27□□□□□ -0.45
SRGAP3-203ENST00000433332 ZCCHC11Q5TAX3 1644 aaKnown RBP12.27□□□□□ -0.45
SRGAP3-203ENST00000433332 CHMP4AQ9BY43 222 aa12.26□□□□□ -0.45
SRGAP3-203ENST00000433332 KDM5BQ9UGL1 1544 aa12.26□□□□□ -0.45
SRGAP3-203ENST00000433332 NPM3O75607 178 aaKnown RBP12.25□□□□□ -0.45
SRGAP3-203ENST00000433332 CDK11BP21127 795 aaKnown RBP12.25□□□□□ -0.45
SRGAP3-203ENST00000433332 DAPK1P53355 1430 aa12.25□□□□□ -0.45
SRGAP3-203ENST00000433332 NAIPQ13075 1403 aa12.25□□□□□ -0.45
SRGAP3-203ENST00000433332 OSCARQ8IYS5 282 aa12.24□□□□□ -0.45
SRGAP3-203ENST00000433332 CROCC2H7BZ55 1655 aa12.24□□□□□ -0.45
SRGAP3-203ENST00000433332 PREX2Q70Z35 1606 aa12.24□□□□□ -0.45
SRGAP3-203ENST00000433332 ACIN1Q9UKV3 1341 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-203ENST00000433332 CFDP1Q9UEE9 299 aaPredicted RBP12.23□□□□□ -0.45
SRGAP3-203ENST00000433332 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
SRGAP3-203ENST00000433332 MAPKBP1O60336 1514 aa12.23□□□□□ -0.45
SRGAP3-203ENST00000433332 ABCC5O15440 1437 aa12.22□□□□□ -0.45
SRGAP3-203ENST00000433332 ADGBQ8N7X0 1667 aa12.22□□□□□ -0.45
SRGAP3-203ENST00000433332 CNKSR2Q8WXI2 1034 aa12.22□□□□□ -0.45
SRGAP3-203ENST00000433332 PDE4CQ08493 712 aa12.21□□□□□ -0.45
SRGAP3-203ENST00000433332 TTC37Q6PGP7 1564 aa12.21□□□□□ -0.45
SRGAP3-203ENST00000433332 ZNF644Q9H582 1327 aaPredicted RBP12.2□□□□□ -0.46
SRGAP3-203ENST00000433332 MYO5CQ9NQX4 1742 aa12.19□□□□□ -0.46
SRGAP3-203ENST00000433332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.19□□□□□ -0.46
SRGAP3-203ENST00000433332 SHANK2Q9UPX8 1470 aa12.19□□□□□ -0.46
SRGAP3-203ENST00000433332 CDC42BPBQ9Y5S2 1711 aa12.19□□□□□ -0.46
SRGAP3-203ENST00000433332 ARHGEF5Q12774 1597 aa12.18□□□□□ -0.46
SRGAP3-203ENST00000433332 ADGRL2O95490 1459 aa12.18□□□□□ -0.46
SRGAP3-203ENST00000433332 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
SRGAP3-203ENST00000433332 SAMD9LQ8IVG5 1584 aa12.17□□□□□ -0.46
SRGAP3-203ENST00000433332 CHIC2Q9UKJ5 165 aa12.16□□□□□ -0.46
SRGAP3-203ENST00000433332 KDM6BO15054 1643 aa12.15□□□□□ -0.46
SRGAP3-203ENST00000433332 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.46
SRGAP3-203ENST00000433332 RRP7BPQ9NSQ0 103 aa12.15□□□□□ -0.46
SRGAP3-203ENST00000433332 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
SRGAP3-203ENST00000433332 HMGB1P09429 215 aaKnown RBP12.14□□□□□ -0.47
SRGAP3-203ENST00000433332 WDR7Q9Y4E6 1490 aa12.14□□□□□ -0.47
SRGAP3-203ENST00000433332 PLEKHH2Q8IVE3 1493 aa12.14□□□□□ -0.47
SRGAP3-203ENST00000433332 ARAP3Q8WWN8 1544 aa12.13□□□□□ -0.47
SRGAP3-203ENST00000433332 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
SRGAP3-203ENST00000433332 MBD5Q9P267 1494 aa12.12□□□□□ -0.47
SRGAP3-203ENST00000433332 NCOA1Q15788 1441 aa12.12□□□□□ -0.47
SRGAP3-203ENST00000433332 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
SRGAP3-203ENST00000433332 ANKRD30AQ9BXX3 1397 aa12.12□□□□□ -0.47
SRGAP3-203ENST00000433332 NBR1Q14596 966 aa12.12□□□□□ -0.47
SRGAP3-203ENST00000433332 PPP6R1Q9UPN7 881 aa12.11□□□□□ -0.47
SRGAP3-203ENST00000433332 CCDC9Q9Y3X0 531 aaKnown RBP12.11□□□□□ -0.47
SRGAP3-203ENST00000433332 SYCP2Q9BX26 1530 aa12.11□□□□□ -0.47
SRGAP3-203ENST00000433332 PLCH2O75038 1416 aa12.11□□□□□ -0.47
SRGAP3-203ENST00000433332 MAST1Q9Y2H9 1570 aa12.1□□□□□ -0.47
SRGAP3-203ENST00000433332 KIAA1107Q9UPP5 1409 aa12.1□□□□□ -0.47
SRGAP3-203ENST00000433332 ABCA9Q8IUA7 1624 aa12.1□□□□□ -0.47
SRGAP3-203ENST00000433332 IGSF3O75054 1194 aa12.09□□□□□ -0.47
SRGAP3-203ENST00000433332 HSP90B1P14625 803 aaKnown RBP12.09□□□□□ -0.47
SRGAP3-203ENST00000433332 KCNH8Q96L42 1107 aa12.09□□□□□ -0.47
SRGAP3-203ENST00000433332 BRD2P25440 801 aaKnown RBP12.08□□□□□ -0.48
SRGAP3-203ENST00000433332 RSPH4AQ5TD94 716 aa12.08□□□□□ -0.48
SRGAP3-203ENST00000433332 ASXL2Q76L83 1435 aa12.08□□□□□ -0.48
SRGAP3-203ENST00000433332 ABCC1P33527 1531 aa12.08□□□□□ -0.48
SRGAP3-203ENST00000433332 TSPY4P0CV99 314 aa12.06□□□□□ -0.48
SRGAP3-203ENST00000433332 TSPY10P0CW01 314 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms