RNA–Protein interactions for RNA: ENST00000433041.1

BRD3-204, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-204ENST00000433041 RIMS1Q86UR5 1692 aaKnown RBP25.93■■□□□ 1.74
BRD3-204ENST00000433041 TROQ12816 1431 aaPredicted RBP25.93■■□□□ 1.74
BRD3-204ENST00000433041 SCAPERQ9BY12 1400 aa25.9■■□□□ 1.74
BRD3-204ENST00000433041 MAGI2Q86UL8 1455 aa25.88■■□□□ 1.73
BRD3-204ENST00000433041 CDC42BPBQ9Y5S2 1711 aa25.87■■□□□ 1.73
BRD3-204ENST00000433041 CASKIN1Q8WXD9 1431 aa25.87■■□□□ 1.73
BRD3-204ENST00000433041 ARID4BQ4LE39 1312 aaPredicted RBP25.87■■□□□ 1.73
BRD3-204ENST00000433041 PREX2Q70Z35 1606 aa25.85■■□□□ 1.73
BRD3-204ENST00000433041 ARHGAP5Q13017 1502 aa25.84■■□□□ 1.73
BRD3-204ENST00000433041 CLIP1P30622 1438 aa25.84■■□□□ 1.73
BRD3-204ENST00000433041 CCDC18Q5T9S5 1454 aa25.84■■□□□ 1.73
BRD3-204ENST00000433041 CDK11AQ9UQ88 783 aaPredicted RBP25.83■■□□□ 1.73
BRD3-204ENST00000433041 KDM5CP41229 1560 aa25.82■■□□□ 1.72
BRD3-204ENST00000433041 FER1L4A9Z1Z3 1794 aa25.81■■□□□ 1.72
BRD3-204ENST00000433041 FYCO1Q9BQS8 1478 aa25.8■■□□□ 1.72
BRD3-204ENST00000433041 EFCAB2Q5VUJ9 269 aa25.78■■□□□ 1.72
BRD3-204ENST00000433041 LMTK3Q96Q04 1460 aa25.78■■□□□ 1.72
BRD3-204ENST00000433041 CDC42BPAQ5VT25 1732 aa25.77■■□□□ 1.72
BRD3-204ENST00000433041 ZNF518AQ6AHZ1 1483 aa25.77■■□□□ 1.72
BRD3-204ENST00000433041 ABCC1P33527 1531 aa25.76■■□□□ 1.71
BRD3-204ENST00000433041 ITSN2Q9NZM3 1697 aa25.76■■□□□ 1.71
BRD3-204ENST00000433041 DIP2CQ9Y2E4 1556 aa25.74■■□□□ 1.71
BRD3-204ENST00000433041 C9orf84Q5VXU9 1444 aa25.74■■□□□ 1.71
BRD3-204ENST00000433041 ILDR1Q86SU0 546 aaPredicted RBP25.74■■□□□ 1.71
BRD3-204ENST00000433041 ARHGEF12Q9NZN5 1544 aa25.73■■□□□ 1.71
BRD3-204ENST00000433041 ATP10AO60312 1499 aa25.73■■□□□ 1.71
BRD3-204ENST00000433041 ABCA6Q8N139 1617 aa25.73■■□□□ 1.71
BRD3-204ENST00000433041 REREQ9P2R6 1566 aa25.66■■□□□ 1.7
BRD3-204ENST00000433041 TRAPPC8Q9Y2L5 1435 aa25.66■■□□□ 1.7
BRD3-204ENST00000433041 MLECQ14165 292 aa25.66■■□□□ 1.7
BRD3-204ENST00000433041 AFAP1Q8N556 730 aa25.66■■□□□ 1.7
BRD3-204ENST00000433041 SAMD9LQ8IVG5 1584 aa25.65■■□□□ 1.7
BRD3-204ENST00000433041 MLH3Q9UHC1 1453 aa25.63■■□□□ 1.69
BRD3-204ENST00000433041 KIDINS220Q9ULH0 1771 aa25.63■■□□□ 1.69
BRD3-204ENST00000433041 PLPPR3Q6T4P5 718 aa25.6■■□□□ 1.69
BRD3-204ENST00000433041 SYCP2Q9BX26 1530 aa25.58■■□□□ 1.69
BRD3-204ENST00000433041 GPATCH8Q9UKJ3 1502 aaKnown RBP25.58■■□□□ 1.69
BRD3-204ENST00000433041 PREX1Q8TCU6 1659 aa25.57■■□□□ 1.68
BRD3-204ENST00000433041 AGLP35573 1532 aa25.54■■□□□ 1.68
BRD3-204ENST00000433041 HSPA2P54652 639 aa25.53■■□□□ 1.68
BRD3-204ENST00000433041 CEP162Q5TB80 1403 aa25.51■■□□□ 1.67
BRD3-204ENST00000433041 C3P01024 1663 aa25.51■■□□□ 1.67
BRD3-204ENST00000433041 TIAM1Q13009 1591 aa25.5■■□□□ 1.67
BRD3-204ENST00000433041 INO80Q9ULG1 1556 aaPredicted RBP25.49■■□□□ 1.67
BRD3-204ENST00000433041 EHBP1L1Q8N3D4 1523 aa25.49■■□□□ 1.67
BRD3-204ENST00000433041 MYT1LQ9UL68 1186 aa25.49■■□□□ 1.67
BRD3-204ENST00000433041 CEBPAP49715 358 aaPredicted RBP25.47■■□□□ 1.67
BRD3-204ENST00000433041 MTUS2Q5JR59 1369 aa25.45■■□□□ 1.67
BRD3-204ENST00000433041 ZNF777Q9ULD5 760 aaPredicted RBP25.45■■□□□ 1.66
BRD3-204ENST00000433041 ATP7AQ04656 1500 aa25.45■■□□□ 1.66
BRD3-204ENST00000433041 PLXNC1O60486 1568 aa25.43■■□□□ 1.66
BRD3-204ENST00000433041 CCNB3Q8WWL7 1395 aa25.43■■□□□ 1.66
BRD3-204ENST00000433041 SUPT6HQ7KZ85 1726 aaKnown RBP25.42■■□□□ 1.66
BRD3-204ENST00000433041 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
BRD3-204ENST00000433041 KIAA1107Q9UPP5 1409 aa25.41■■□□□ 1.66
BRD3-204ENST00000433041 HNRNPMP52272 730 aaKnown RBP eCLIP25.39■■□□□ 1.66
BRD3-204ENST00000433041 STRCQ7RTU9 1775 aa25.39■■□□□ 1.65
BRD3-204ENST00000433041 MROH2AA6NES4 1674 aa25.37■■□□□ 1.65
BRD3-204ENST00000433041 CFDP1Q9UEE9 299 aaPredicted RBP25.37■■□□□ 1.65
BRD3-204ENST00000433041 SPAG9O60271 1321 aaKnown RBP25.37■■□□□ 1.65
BRD3-204ENST00000433041 SETD1BQ9UPS6 1966 aaKnown RBP25.35■■□□□ 1.65
BRD3-204ENST00000433041 UHRF1BP1Q6BDS2 1440 aa25.35■■□□□ 1.65
BRD3-204ENST00000433041 FBXO41Q8TF61 875 aa25.34■■□□□ 1.65
BRD3-204ENST00000433041 ADGBQ8N7X0 1667 aa25.33■■□□□ 1.65
BRD3-204ENST00000433041 MBD5Q9P267 1494 aa25.33■■□□□ 1.65
BRD3-204ENST00000433041 CLTCQ00610 1675 aaKnown RBP25.32■■□□□ 1.64
BRD3-204ENST00000433041 ZNF644Q9H582 1327 aaPredicted RBP25.32■■□□□ 1.64
BRD3-204ENST00000433041 CNTLNQ9NXG0 1405 aa25.31■■□□□ 1.64
BRD3-204ENST00000433041 A2MP01023 1474 aa25.31■■□□□ 1.64
BRD3-204ENST00000433041 NCOA2Q15596 1464 aa25.3■■□□□ 1.64
BRD3-204ENST00000433041 CAMSAP2Q08AD1 1489 aa25.26■■□□□ 1.63
BRD3-204ENST00000433041 VPS8Q8N3P4 1428 aa25.24■■□□□ 1.63
BRD3-204ENST00000433041 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
BRD3-204ENST00000433041 MYO3AQ8NEV4 1616 aa25.22■■□□□ 1.63
BRD3-204ENST00000433041 CCDC141Q6ZP82 1450 aa25.21■■□□□ 1.63
BRD3-204ENST00000433041 NPATQ14207 1427 aa25.2■■□□□ 1.63
BRD3-204ENST00000433041 ZNF142P52746 1687 aaPredicted RBP25.2■■□□□ 1.63
BRD3-204ENST00000433041 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
BRD3-204ENST00000433041 RTEL1-TNFRSF6BF6WH68 1400 aa25.2■■□□□ 1.62
BRD3-204ENST00000433041 ZMYM3Q14202 1370 aa25.18■■□□□ 1.62
BRD3-204ENST00000433041 LRRC9Q6ZRR7 1453 aa25.18■■□□□ 1.62
BRD3-204ENST00000433041 ARHGEF5Q12774 1597 aa25.16■■□□□ 1.62
BRD3-204ENST00000433041 NCOA1Q15788 1441 aa25.16■■□□□ 1.62
BRD3-204ENST00000433041 PTPRKQ15262 1439 aa25.14■■□□□ 1.62
BRD3-204ENST00000433041 CERKQ8TCT0 537 aa25.14■■□□□ 1.62
BRD3-204ENST00000433041 CAMSAP1Q5T5Y3 1602 aa25.14■■□□□ 1.61
BRD3-204ENST00000433041 PTPRTO14522 1441 aa25.12■■□□□ 1.61
BRD3-204ENST00000433041 CEP170BQ9Y4F5 1589 aaPredicted RBP25.12■■□□□ 1.61
BRD3-204ENST00000433041 GGT6Q6P531 493 aa25.11■■□□□ 1.61
BRD3-204ENST00000433041 DHX29Q7Z478 1369 aaKnown RBP25.1■■□□□ 1.61
BRD3-204ENST00000433041 MAP3K1Q13233 1512 aa25.1■■□□□ 1.61
BRD3-204ENST00000433041 DMRT2Q9Y5R5 561 aa25.07■■□□□ 1.6
BRD3-204ENST00000433041 LTBP4Q8N2S1 1624 aa25.07■■□□□ 1.6
BRD3-204ENST00000433041 MAST1Q9Y2H9 1570 aa25.06■■□□□ 1.6
BRD3-204ENST00000433041 KDM5DQ9BY66 1539 aa25.06■■□□□ 1.6
BRD3-204ENST00000433041 FAM135AQ9P2D6 1515 aa25.04■■□□□ 1.6
BRD3-204ENST00000433041 KANK4Q5T7N3 995 aaPredicted RBP25.04■■□□□ 1.6
BRD3-204ENST00000433041 PLA2R1Q13018 1463 aa25.02■■□□□ 1.6
BRD3-204ENST00000433041 RNF17Q9BXT8 1623 aaKnown RBP25.01■■□□□ 1.59
BRD3-204ENST00000433041 PPP6R1Q9UPN7 881 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms