RNA–Protein interactions for RNA: ENST00000432343.1

ARPC1B-208, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 839 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-208ENST00000432343 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
ARPC1B-208ENST00000432343 PLCH2O75038 1416 aa21.41■■□□□ 1.02
ARPC1B-208ENST00000432343 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
ARPC1B-208ENST00000432343 ZNF777Q9ULD5 760 aaPredicted RBP21.36■■□□□ 1.01
ARPC1B-208ENST00000432343 NEO1Q92859 1461 aa21.36■■□□□ 1.01
ARPC1B-208ENST00000432343 ARAP3Q8WWN8 1544 aa21.35■■□□□ 1.01
ARPC1B-208ENST00000432343 AKNAQ7Z591 1439 aa21.35■■□□□ 1.01
ARPC1B-208ENST00000432343 EFCAB2Q5VUJ9 269 aa21.34■■□□□ 1.01
ARPC1B-208ENST00000432343 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
ARPC1B-208ENST00000432343 SAMD9LQ8IVG5 1584 aa21.32■■□□□ 1
ARPC1B-208ENST00000432343 CFDP1Q9UEE9 299 aaPredicted RBP21.32■■□□□ 1
ARPC1B-208ENST00000432343 ADGRL1O94910 1474 aa21.32■■□□□ 1
ARPC1B-208ENST00000432343 RICTORQ6R327 1708 aa21.29■■□□□ 1
ARPC1B-208ENST00000432343 PHLDB1Q86UU1 1377 aa21.28■■□□□ 1
ARPC1B-208ENST00000432343 ABCC1P33527 1531 aa21.27■■□□□ 1
ARPC1B-208ENST00000432343 MYOM3Q5VTT5 1437 aa21.27■■□□□ 1
ARPC1B-208ENST00000432343 SCAPERQ9BY12 1400 aa21.27■■□□□ 1
ARPC1B-208ENST00000432343 FRMPD1Q5SYB0 1578 aa21.27■□□□□ 0.99
ARPC1B-208ENST00000432343 SYCP2Q9BX26 1530 aa21.26■□□□□ 0.99
ARPC1B-208ENST00000432343 RAPGEF3O95398 923 aa21.26■□□□□ 0.99
ARPC1B-208ENST00000432343 ZNF644Q9H582 1327 aaPredicted RBP21.26■□□□□ 0.99
ARPC1B-208ENST00000432343 DENND4BO75064 1496 aaPredicted RBP21.26■□□□□ 0.99
ARPC1B-208ENST00000432343 CAMSAP2Q08AD1 1489 aa21.24■□□□□ 0.99
ARPC1B-208ENST00000432343 ARHGEF12Q9NZN5 1544 aa21.23■□□□□ 0.99
ARPC1B-208ENST00000432343 PTPN23Q9H3S7 1636 aa21.22■□□□□ 0.99
ARPC1B-208ENST00000432343 HNRNPMP52272 730 aaKnown RBP eCLIP21.21■□□□□ 0.99
ARPC1B-208ENST00000432343 POGZQ7Z3K3 1410 aa21.2■□□□□ 0.98
ARPC1B-208ENST00000432343 FGD6Q6ZV73 1430 aa21.18■□□□□ 0.98
ARPC1B-208ENST00000432343 TRAPPC8Q9Y2L5 1435 aa21.18■□□□□ 0.98
ARPC1B-208ENST00000432343 PLEKHH2Q8IVE3 1493 aa21.18■□□□□ 0.98
ARPC1B-208ENST00000432343 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
ARPC1B-208ENST00000432343 MIA2Q96PC5 1412 aa21.17■□□□□ 0.98
ARPC1B-208ENST00000432343 AFAP1Q8N556 730 aa21.16■□□□□ 0.98
ARPC1B-208ENST00000432343 ZNF518AQ6AHZ1 1483 aa21.15■□□□□ 0.98
ARPC1B-208ENST00000432343 ZMYM4Q5VZL5 1548 aa21.13■□□□□ 0.97
ARPC1B-208ENST00000432343 KIAA1107Q9UPP5 1409 aa21.12■□□□□ 0.97
ARPC1B-208ENST00000432343 KDM5CP41229 1560 aa21.12■□□□□ 0.97
ARPC1B-208ENST00000432343 HECW2Q9P2P5 1572 aa21.12■□□□□ 0.97
ARPC1B-208ENST00000432343 FAM50AQ14320 339 aaKnown RBP21.12■□□□□ 0.97
ARPC1B-208ENST00000432343 ZFYVE16Q7Z3T8 1539 aa21.1■□□□□ 0.97
ARPC1B-208ENST00000432343 MBD5Q9P267 1494 aa21.1■□□□□ 0.97
ARPC1B-208ENST00000432343 TCOF1Q13428 1488 aaKnown RBP21.09■□□□□ 0.97
ARPC1B-208ENST00000432343 KIDINS220Q9ULH0 1771 aa21.09■□□□□ 0.97
ARPC1B-208ENST00000432343 ARHGEF5Q12774 1597 aa21.09■□□□□ 0.97
ARPC1B-208ENST00000432343 CROCC2H7BZ55 1655 aa21.09■□□□□ 0.97
ARPC1B-208ENST00000432343 CCDC141Q6ZP82 1450 aa21.08■□□□□ 0.97
ARPC1B-208ENST00000432343 YEATS2Q9ULM3 1422 aa21.08■□□□□ 0.97
ARPC1B-208ENST00000432343 ARHGEF40Q8TER5 1519 aa21.08■□□□□ 0.96
ARPC1B-208ENST00000432343 ABCA6Q8N139 1617 aa21.07■□□□□ 0.96
ARPC1B-208ENST00000432343 INO80Q9ULG1 1556 aaPredicted RBP21.06■□□□□ 0.96
ARPC1B-208ENST00000432343 SPAG9O60271 1321 aaKnown RBP21.05■□□□□ 0.96
ARPC1B-208ENST00000432343 ATP7AQ04656 1500 aa21.05■□□□□ 0.96
ARPC1B-208ENST00000432343 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
ARPC1B-208ENST00000432343 DIP2CQ9Y2E4 1556 aa21.03■□□□□ 0.96
ARPC1B-208ENST00000432343 MAGI2Q86UL8 1455 aa21.02■□□□□ 0.96
ARPC1B-208ENST00000432343 MLH3Q9UHC1 1453 aa21.02■□□□□ 0.96
ARPC1B-208ENST00000432343 DAPK1P53355 1430 aa21.01■□□□□ 0.95
ARPC1B-208ENST00000432343 SIGLEC1Q9BZZ2 1709 aa21.01■□□□□ 0.95
ARPC1B-208ENST00000432343 ADGBQ8N7X0 1667 aa21■□□□□ 0.95
ARPC1B-208ENST00000432343 ITGAEP38570 1179 aa21■□□□□ 0.95
ARPC1B-208ENST00000432343 ABCC5O15440 1437 aa20.99■□□□□ 0.95
ARPC1B-208ENST00000432343 TSPY4P0CV99 314 aa20.99■□□□□ 0.95
ARPC1B-208ENST00000432343 TSPY10P0CW01 314 aa20.99■□□□□ 0.95
ARPC1B-208ENST00000432343 C9orf84Q5VXU9 1444 aa20.98■□□□□ 0.95
ARPC1B-208ENST00000432343 RSPH4AQ5TD94 716 aa20.98■□□□□ 0.95
ARPC1B-208ENST00000432343 MAST1Q9Y2H9 1570 aa20.97■□□□□ 0.95
ARPC1B-208ENST00000432343 RRBP1Q9P2E9 1410 aaKnown RBP20.97■□□□□ 0.95
ARPC1B-208ENST00000432343 CHIC2Q9UKJ5 165 aa20.97■□□□□ 0.95
ARPC1B-208ENST00000432343 ATP10AO60312 1499 aa20.96■□□□□ 0.95
ARPC1B-208ENST00000432343 ARID4BQ4LE39 1312 aaPredicted RBP20.96■□□□□ 0.95
ARPC1B-208ENST00000432343 RTEL1-TNFRSF6BF6WH68 1400 aa20.93■□□□□ 0.94
ARPC1B-208ENST00000432343 SHANK2Q9UPX8 1470 aa20.93■□□□□ 0.94
ARPC1B-208ENST00000432343 PLXNC1O60486 1568 aa20.91■□□□□ 0.94
ARPC1B-208ENST00000432343 A2MP01023 1474 aa20.89■□□□□ 0.94
ARPC1B-208ENST00000432343 PTPRKQ15262 1439 aa20.89■□□□□ 0.94
ARPC1B-208ENST00000432343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.88■□□□□ 0.93
ARPC1B-208ENST00000432343 MLECQ14165 292 aa20.88■□□□□ 0.93
ARPC1B-208ENST00000432343 RRP7BPQ9NSQ0 103 aa20.88■□□□□ 0.93
ARPC1B-208ENST00000432343 REREQ9P2R6 1566 aa20.88■□□□□ 0.93
ARPC1B-208ENST00000432343 BCORL1Q5H9F3 1711 aa20.87■□□□□ 0.93
ARPC1B-208ENST00000432343 ANKRD30AQ9BXX3 1397 aa20.85■□□□□ 0.93
ARPC1B-208ENST00000432343 KIF15Q9NS87 1388 aa20.85■□□□□ 0.93
ARPC1B-208ENST00000432343 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
ARPC1B-208ENST00000432343 DUOX2Q9NRD8 1548 aa20.82■□□□□ 0.92
ARPC1B-208ENST00000432343 FER1L4A9Z1Z3 1794 aa20.82■□□□□ 0.92
ARPC1B-208ENST00000432343 DHX29Q7Z478 1369 aaKnown RBP20.81■□□□□ 0.92
ARPC1B-208ENST00000432343 NCOA1Q15788 1441 aa20.8■□□□□ 0.92
ARPC1B-208ENST00000432343 AGLP35573 1532 aa20.8■□□□□ 0.92
ARPC1B-208ENST00000432343 MADDQ8WXG6 1647 aa20.8■□□□□ 0.92
ARPC1B-208ENST00000432343 ADAMTSL3P82987 1691 aa20.79■□□□□ 0.92
ARPC1B-208ENST00000432343 RIMS1Q86UR5 1692 aaKnown RBP20.79■□□□□ 0.92
ARPC1B-208ENST00000432343 KIF3BO15066 747 aa20.77■□□□□ 0.92
ARPC1B-208ENST00000432343 EIF2AK4Q9P2K8 1649 aaKnown RBP20.77■□□□□ 0.92
ARPC1B-208ENST00000432343 GGT6Q6P531 493 aa20.76■□□□□ 0.91
ARPC1B-208ENST00000432343 KDM4FA0A1W2PPD8 638 aa20.75■□□□□ 0.91
ARPC1B-208ENST00000432343 ROCK1Q13464 1354 aa20.74■□□□□ 0.91
ARPC1B-208ENST00000432343 GCC2Q8IWJ2 1684 aa20.74■□□□□ 0.91
ARPC1B-208ENST00000432343 ERBINQ96RT1 1412 aa20.73■□□□□ 0.91
ARPC1B-208ENST00000432343 CLTCQ00610 1675 aaKnown RBP20.73■□□□□ 0.91
ARPC1B-208ENST00000432343 PLPPR3Q6T4P5 718 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms