RNA–Protein interactions for RNA: ENST00000432260.2

CUL3-205, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-205ENST00000432260 EMP3P54852 163 aa10.58□□□□□ -0.72
CUL3-205ENST00000432260 PPP1R37O75864 691 aa10.57□□□□□ -0.72
CUL3-205ENST00000432260 ZNF710Q8N1W2 664 aa10.57□□□□□ -0.72
CUL3-205ENST00000432260 DOK7Q18PE1 504 aa10.56□□□□□ -0.72
CUL3-205ENST00000432260 POTEB3A0JP26 581 aa10.54□□□□□ -0.72
CUL3-205ENST00000432260 POTEBQ6S5H4 581 aa10.54□□□□□ -0.72
CUL3-205ENST00000432260 FAM205CA6NFA0 338 aa10.52□□□□□ -0.73
CUL3-205ENST00000432260 HOXB1P14653 301 aaPredicted RBP10.51□□□□□ -0.73
CUL3-205ENST00000432260 RIMBP2O15034 1052 aa10.5□□□□□ -0.73
CUL3-205ENST00000432260 NKX1-1Q15270 411 aaPredicted RBP10.5□□□□□ -0.73
CUL3-205ENST00000432260 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
CUL3-205ENST00000432260 HS3ST6Q96QI5 342 aa10.49□□□□□ -0.73
CUL3-205ENST00000432260 KIF3CO14782 793 aa10.47□□□□□ -0.73
CUL3-205ENST00000432260 DNAJC5Q9H3Z4 198 aa10.46□□□□□ -0.73
CUL3-205ENST00000432260 TMC2Q8TDI7 906 aa10.45□□□□□ -0.74
CUL3-205ENST00000432260 ZSWIM6Q9HCJ5 1215 aa10.44□□□□□ -0.74
CUL3-205ENST00000432260 ERBB3P21860 1342 aa10.43□□□□□ -0.74
CUL3-205ENST00000432260 GPR153Q6NV75 609 aa10.43□□□□□ -0.74
CUL3-205ENST00000432260 KRTAP3-3Q9BYR6 98 aa10.43□□□□□ -0.74
CUL3-205ENST00000432260 KRTAP3-2Q9BYR7 98 aa10.43□□□□□ -0.74
CUL3-205ENST00000432260 ARSIQ5FYB1 569 aa10.42□□□□□ -0.74
CUL3-205ENST00000432260 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.743e-6■■□□□ 13.5
CUL3-205ENST00000432260 VARS2Q5ST30 1063 aaKnown RBP10.38□□□□□ -0.75
CUL3-205ENST00000432260 RYDENQ9NUL5 291 aaKnown RBP10.38□□□□□ -0.75
CUL3-205ENST00000432260 SPNS2Q8IVW8 549 aa10.35□□□□□ -0.75
CUL3-205ENST00000432260 GTPBP6O43824 516 aaPredicted RBP10.34□□□□□ -0.75
CUL3-205ENST00000432260 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
CUL3-205ENST00000432260 PCDHGA4Q9Y5G9 962 aa10.33□□□□□ -0.76
CUL3-205ENST00000432260 SLC34A2O95436 690 aa10.32□□□□□ -0.76
CUL3-205ENST00000432260 NUDT7P0C024 238 aa10.32□□□□□ -0.76
CUL3-205ENST00000432260 PLPP6Q8IY26 295 aa10.32□□□□□ -0.76
CUL3-205ENST00000432260 ZNF316A6NFI3 1004 aaPredicted RBP10.31□□□□□ -0.76
CUL3-205ENST00000432260 FOXK1P85037 733 aa10.31□□□□□ -0.76
CUL3-205ENST00000432260 MMRN1Q13201 1228 aa10.31□□□□□ -0.76
CUL3-205ENST00000432260 DSG2Q14126 1118 aa10.31□□□□□ -0.76
CUL3-205ENST00000432260 BBXQ8WY36 941 aaPredicted RBP10.29□□□□□ -0.76
CUL3-205ENST00000432260 ZNF687Q8N1G0 1237 aa10.28□□□□□ -0.76
CUL3-205ENST00000432260 CRISPLD2Q9H0B8 497 aa10.26□□□□□ -0.77
CUL3-205ENST00000432260 LHX6Q9UPM6 363 aa10.26□□□□□ -0.77
CUL3-205ENST00000432260 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.25□□□□□ -0.77
CUL3-205ENST00000432260 PTCD2Q8WV60 388 aaKnown RBP10.24□□□□□ -0.77
CUL3-205ENST00000432260 NCKAP5LQ9HCH0 1330 aa10.23□□□□□ -0.77
CUL3-205ENST00000432260 PDE4AP27815 886 aa10.22□□□□□ -0.77
CUL3-205ENST00000432260 PPP1R15BQ5SWA1 713 aa10.22□□□□□ -0.77
CUL3-205ENST00000432260 PLCB2Q00722 1185 aa10.21□□□□□ -0.77
CUL3-205ENST00000432260 UPF1Q92900 1129 aaKnown RBP eCLIP10.2□□□□□ -0.78
CUL3-205ENST00000432260 PAXIP1Q6ZW49 1069 aaPredicted RBP10.19□□□□□ -0.78
CUL3-205ENST00000432260 LARP6Q9BRS8 491 aaKnown RBP10.19□□□□□ -0.78
CUL3-205ENST00000432260 KDM4FA0A1W2PPD8 638 aa10.18□□□□□ -0.78
CUL3-205ENST00000432260 TBC1D12O60347 775 aa10.18□□□□□ -0.78
CUL3-205ENST00000432260 CFAP44Q96MT7 982 aa10.18□□□□□ -0.78
CUL3-205ENST00000432260 CADPS2Q86UW7 1296 aa10.17□□□□□ -0.78
CUL3-205ENST00000432260 POTEEQ6S8J3 1075 aa10.16□□□□□ -0.78
CUL3-205ENST00000432260 OXER1Q8TDS5 423 aa10.16□□□□□ -0.78
CUL3-205ENST00000432260 ANKRD13DQ6ZTN6 518 aa10.15□□□□□ -0.78
CUL3-205ENST00000432260 SPRYD3Q8NCJ5 442 aa10.15□□□□□ -0.78
CUL3-205ENST00000432260 DDX27Q96GQ7 796 aaKnown RBP10.15□□□□□ -0.78
CUL3-205ENST00000432260 AXIN2Q9Y2T1 843 aa10.15□□□□□ -0.78
CUL3-205ENST00000432260 LSM11P83369 360 aaKnown RBP eCLIP10.12□□□□□ -0.79
CUL3-205ENST00000432260 PSDA5PKW4 1024 aaPredicted RBP10.11□□□□□ -0.79
CUL3-205ENST00000432260 PBX2P40425 430 aa10.11□□□□□ -0.79
CUL3-205ENST00000432260 MFSD10Q14728 455 aa10.11□□□□□ -0.79
CUL3-205ENST00000432260 SLC24A1O60721 1099 aa10.1□□□□□ -0.79
CUL3-205ENST00000432260 PPP4R3BQ5MIZ7 849 aa10.08□□□□□ -0.8
CUL3-205ENST00000432260 MYT1LQ9UL68 1186 aa10.08□□□□□ -0.8
CUL3-205ENST00000432260 ARHGAP33O14559 1287 aa10.07□□□□□ -0.8
CUL3-205ENST00000432260 HAP1P54257 671 aaPredicted RBP10.07□□□□□ -0.8
CUL3-205ENST00000432260 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
CUL3-205ENST00000432260 EMILIN3Q9NT22 766 aa10.06□□□□□ -0.8
CUL3-205ENST00000432260 EVI5O60447 810 aa10.04□□□□□ -0.8
CUL3-205ENST00000432260 PSEN2P49810 448 aa10.04□□□□□ -0.8
CUL3-205ENST00000432260 MAP3K9P80192 1104 aa10.04□□□□□ -0.8
CUL3-205ENST00000432260 ZNF454Q8N9F8 522 aa10.04□□□□□ -0.8
CUL3-205ENST00000432260 PTGER2P43116 358 aa10.03□□□□□ -0.8
CUL3-205ENST00000432260 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
CUL3-205ENST00000432260 KCNK17Q96T54 332 aa10.01□□□□□ -0.81
CUL3-205ENST00000432260 ANO8Q9HCE9 1232 aaPredicted RBP10.01□□□□□ -0.81
CUL3-205ENST00000432260 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
CUL3-205ENST00000432260 ADGRD1Q6QNK2 874 aa10□□□□□ -0.81
CUL3-205ENST00000432260 FOSBP53539 338 aa9.99□□□□□ -0.81
CUL3-205ENST00000432260 CAMK2BQ13554 666 aa9.97□□□□□ -0.81
CUL3-205ENST00000432260 JPH4Q96JJ6 628 aa9.97□□□□□ -0.81
CUL3-205ENST00000432260 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
CUL3-205ENST00000432260 TK2O00142 265 aa9.95□□□□□ -0.82
CUL3-205ENST00000432260 DPYSL4O14531 572 aa9.95□□□□□ -0.82
CUL3-205ENST00000432260 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
CUL3-205ENST00000432260 ZDHHC16Q969W1 377 aa9.93□□□□□ -0.82
CUL3-205ENST00000432260 ADAM33Q9BZ11 813 aa9.93□□□□□ -0.82
CUL3-205ENST00000432260 HRO43593 1189 aa9.92□□□□□ -0.82
CUL3-205ENST00000432260 PTPREP23469 700 aa9.92□□□□□ -0.82
CUL3-205ENST00000432260 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
CUL3-205ENST00000432260 STAC3Q96MF2 364 aa9.89□□□□□ -0.83
CUL3-205ENST00000432260 VPS9D1Q9Y2B5 631 aa9.89□□□□□ -0.83
CUL3-205ENST00000432260 KDM2AQ9Y2K7 1162 aa9.87□□□□□ -0.83
CUL3-205ENST00000432260 PHF14O94880 888 aa9.86□□□□□ -0.83
CUL3-205ENST00000432260 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
CUL3-205ENST00000432260 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
CUL3-205ENST00000432260 ZBED2Q9BTP6 218 aa9.86□□□□□ -0.83
CUL3-205ENST00000432260 WDR70Q9NW82 654 aa9.86□□□□□ -0.83
CUL3-205ENST00000432260 SLC4A5Q9BY07 1137 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms