RNA–Protein interactions for RNA: ENST00000431229.1

SIM2-202, Transcript of SIM bHLH transcription factor 2, humanhuman

TSL 1 (best)

Gene SIM2, Length 1,465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-202ENST00000431229 CDK11AQ9UQ88 783 aaPredicted RBP27.14■■□□□ 1.94
SIM2-202ENST00000431229 SIGLEC1Q9BZZ2 1709 aa27.13■■□□□ 1.93
SIM2-202ENST00000431229 ZMYM4Q5VZL5 1548 aa27.12■■□□□ 1.93
SIM2-202ENST00000431229 POGZQ7Z3K3 1410 aa27.11■■□□□ 1.93
SIM2-202ENST00000431229 EFCAB2Q5VUJ9 269 aa27.11■■□□□ 1.93
SIM2-202ENST00000431229 MYO5CQ9NQX4 1742 aa27.1■■□□□ 1.93
SIM2-202ENST00000431229 LRRIQ1Q96JM4 1722 aa27.09■■□□□ 1.93
SIM2-202ENST00000431229 TROQ12816 1431 aaPredicted RBP27.07■■□□□ 1.92
SIM2-202ENST00000431229 MYT1LQ9UL68 1186 aa27.06■■□□□ 1.92
SIM2-202ENST00000431229 ARHGAP5Q13017 1502 aa27.06■■□□□ 1.92
SIM2-202ENST00000431229 CLIP1P30622 1438 aa27.05■■□□□ 1.92
SIM2-202ENST00000431229 PCF11O94913 1555 aaKnown RBP27.05■■□□□ 1.92
SIM2-202ENST00000431229 MAGI2Q86UL8 1455 aa27.03■■□□□ 1.92
SIM2-202ENST00000431229 HSPA2P54652 639 aa27.03■■□□□ 1.92
SIM2-202ENST00000431229 LMTK3Q96Q04 1460 aa27.02■■□□□ 1.92
SIM2-202ENST00000431229 AFAP1Q8N556 730 aa27.01■■□□□ 1.91
SIM2-202ENST00000431229 ATP10AO60312 1499 aa26.97■■□□□ 1.91
SIM2-202ENST00000431229 FER1L4A9Z1Z3 1794 aa26.97■■□□□ 1.91
SIM2-202ENST00000431229 C9orf84Q5VXU9 1444 aa26.95■■□□□ 1.91
SIM2-202ENST00000431229 CASKIN1Q8WXD9 1431 aa26.95■■□□□ 1.9
SIM2-202ENST00000431229 ZNF518AQ6AHZ1 1483 aa26.94■■□□□ 1.9
SIM2-202ENST00000431229 CEBPAP49715 358 aaPredicted RBP26.92■■□□□ 1.9
SIM2-202ENST00000431229 CDC42BPBQ9Y5S2 1711 aa26.92■■□□□ 1.9
SIM2-202ENST00000431229 CCDC18Q5T9S5 1454 aa26.91■■□□□ 1.9
SIM2-202ENST00000431229 ZNF777Q9ULD5 760 aaPredicted RBP26.87■■□□□ 1.89
SIM2-202ENST00000431229 PREX2Q70Z35 1606 aa26.86■■□□□ 1.89
SIM2-202ENST00000431229 KDM5CP41229 1560 aa26.86■■□□□ 1.89
SIM2-202ENST00000431229 ARHGEF12Q9NZN5 1544 aa26.86■■□□□ 1.89
SIM2-202ENST00000431229 TRAPPC8Q9Y2L5 1435 aa26.86■■□□□ 1.89
SIM2-202ENST00000431229 FBXO41Q8TF61 875 aa26.86■■□□□ 1.89
SIM2-202ENST00000431229 DIP2CQ9Y2E4 1556 aa26.84■■□□□ 1.89
SIM2-202ENST00000431229 FYCO1Q9BQS8 1478 aa26.83■■□□□ 1.89
SIM2-202ENST00000431229 ABCC1P33527 1531 aa26.82■■□□□ 1.88
SIM2-202ENST00000431229 ABCA6Q8N139 1617 aa26.82■■□□□ 1.88
SIM2-202ENST00000431229 CDC42BPAQ5VT25 1732 aa26.8■■□□□ 1.88
SIM2-202ENST00000431229 ITSN2Q9NZM3 1697 aa26.79■■□□□ 1.88
SIM2-202ENST00000431229 MLH3Q9UHC1 1453 aa26.75■■□□□ 1.87
SIM2-202ENST00000431229 HNRNPMP52272 730 aaKnown RBP eCLIP26.74■■□□□ 1.87
SIM2-202ENST00000431229 ESF1Q9H501 851 aaKnown RBP26.73■■□□□ 1.87
SIM2-202ENST00000431229 SAMD9LQ8IVG5 1584 aa26.71■■□□□ 1.87
SIM2-202ENST00000431229 PREX1Q8TCU6 1659 aa26.71■■□□□ 1.87
SIM2-202ENST00000431229 SYCP2Q9BX26 1530 aa26.7■■□□□ 1.87
SIM2-202ENST00000431229 KIDINS220Q9ULH0 1771 aa26.7■■□□□ 1.86
SIM2-202ENST00000431229 GPATCH8Q9UKJ3 1502 aaKnown RBP26.69■■□□□ 1.86
SIM2-202ENST00000431229 REREQ9P2R6 1566 aa26.67■■□□□ 1.86
SIM2-202ENST00000431229 MTUS2Q5JR59 1369 aa26.67■■□□□ 1.86
SIM2-202ENST00000431229 CFDP1Q9UEE9 299 aaPredicted RBP26.67■■□□□ 1.86
SIM2-202ENST00000431229 CCNB3Q8WWL7 1395 aa26.66■■□□□ 1.86
SIM2-202ENST00000431229 SPAG9O60271 1321 aaKnown RBP26.66■■□□□ 1.86
SIM2-202ENST00000431229 UHRF1BP1Q6BDS2 1440 aa26.65■■□□□ 1.86
SIM2-202ENST00000431229 C3P01024 1663 aa26.64■■□□□ 1.85
SIM2-202ENST00000431229 AGLP35573 1532 aa26.62■■□□□ 1.85
SIM2-202ENST00000431229 CERKQ8TCT0 537 aa26.62■■□□□ 1.85
SIM2-202ENST00000431229 SUPT6HQ7KZ85 1726 aaKnown RBP26.59■■□□□ 1.85
SIM2-202ENST00000431229 ZNF644Q9H582 1327 aaPredicted RBP26.58■■□□□ 1.85
SIM2-202ENST00000431229 ATP7AQ04656 1500 aa26.56■■□□□ 1.84
SIM2-202ENST00000431229 CEP162Q5TB80 1403 aa26.56■■□□□ 1.84
SIM2-202ENST00000431229 STRCQ7RTU9 1775 aa26.56■■□□□ 1.84
SIM2-202ENST00000431229 SETD1BQ9UPS6 1966 aaKnown RBP26.52■■□□□ 1.84
SIM2-202ENST00000431229 TIAM1Q13009 1591 aa26.52■■□□□ 1.84
SIM2-202ENST00000431229 PLEKHH2Q8IVE3 1493 aa26.52■■□□□ 1.84
SIM2-202ENST00000431229 KIAA1107Q9UPP5 1409 aa26.51■■□□□ 1.83
SIM2-202ENST00000431229 GGT6Q6P531 493 aa26.51■■□□□ 1.83
SIM2-202ENST00000431229 CNTLNQ9NXG0 1405 aa26.51■■□□□ 1.83
SIM2-202ENST00000431229 EHBP1L1Q8N3D4 1523 aa26.49■■□□□ 1.83
SIM2-202ENST00000431229 INO80Q9ULG1 1556 aaPredicted RBP26.49■■□□□ 1.83
SIM2-202ENST00000431229 A2MP01023 1474 aa26.49■■□□□ 1.83
SIM2-202ENST00000431229 DMRT2Q9Y5R5 561 aa26.49■■□□□ 1.83
SIM2-202ENST00000431229 ZMYM3Q14202 1370 aa26.47■■□□□ 1.83
SIM2-202ENST00000431229 CLTCQ00610 1675 aaKnown RBP26.46■■□□□ 1.83
SIM2-202ENST00000431229 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
SIM2-202ENST00000431229 PLXNC1O60486 1568 aa26.42■■□□□ 1.82
SIM2-202ENST00000431229 MROH2AA6NES4 1674 aa26.4■■□□□ 1.82
SIM2-202ENST00000431229 MBD5Q9P267 1494 aa26.4■■□□□ 1.82
SIM2-202ENST00000431229 CAMSAP1Q5T5Y3 1602 aa26.38■■□□□ 1.81
SIM2-202ENST00000431229 NCOA2Q15596 1464 aa26.38■■□□□ 1.81
SIM2-202ENST00000431229 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
SIM2-202ENST00000431229 NCKAP5LQ9HCH0 1330 aa26.37■■□□□ 1.81
SIM2-202ENST00000431229 PTPRTO14522 1441 aa26.37■■□□□ 1.81
SIM2-202ENST00000431229 NPATQ14207 1427 aa26.37■■□□□ 1.81
SIM2-202ENST00000431229 ADGBQ8N7X0 1667 aa26.37■■□□□ 1.81
SIM2-202ENST00000431229 CAMSAP2Q08AD1 1489 aa26.34■■□□□ 1.81
SIM2-202ENST00000431229 PTPRKQ15262 1439 aa26.32■■□□□ 1.8
SIM2-202ENST00000431229 KIF3BO15066 747 aa26.31■■□□□ 1.8
SIM2-202ENST00000431229 MYO3AQ8NEV4 1616 aa26.31■■□□□ 1.8
SIM2-202ENST00000431229 CCDC141Q6ZP82 1450 aa26.29■■□□□ 1.8
SIM2-202ENST00000431229 DHX29Q7Z478 1369 aaKnown RBP26.29■■□□□ 1.8
SIM2-202ENST00000431229 RTEL1-TNFRSF6BF6WH68 1400 aa26.28■■□□□ 1.8
SIM2-202ENST00000431229 CEP170BQ9Y4F5 1589 aaPredicted RBP26.25■■□□□ 1.79
SIM2-202ENST00000431229 LTBP4Q8N2S1 1624 aa26.25■■□□□ 1.79
SIM2-202ENST00000431229 FBXO31Q5XUX0 539 aaPredicted RBP26.24■■□□□ 1.79
SIM2-202ENST00000431229 ZNF335Q9H4Z2 1342 aaPredicted RBP26.23■■□□□ 1.79
SIM2-202ENST00000431229 VPS8Q8N3P4 1428 aa26.23■■□□□ 1.79
SIM2-202ENST00000431229 ZNF142P52746 1687 aaPredicted RBP26.22■■□□□ 1.79
SIM2-202ENST00000431229 PPP6R1Q9UPN7 881 aa26.22■■□□□ 1.79
SIM2-202ENST00000431229 KANK4Q5T7N3 995 aaPredicted RBP26.21■■□□□ 1.79
SIM2-202ENST00000431229 LRRC9Q6ZRR7 1453 aa26.2■■□□□ 1.79
SIM2-202ENST00000431229 TSPY4P0CV99 314 aa26.19■■□□□ 1.78
SIM2-202ENST00000431229 TSPY10P0CW01 314 aa26.19■■□□□ 1.78
SIM2-202ENST00000431229 WASHC2CQ9Y4E1 1318 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms