RNA–Protein interactions for RNA: ENST00000430978.6

LINC00454-202, long intergenic non-protein coding RNA 454, humanhuman

TSL 5 BASIC

Gene LINC00454, Length 1,327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-202ENST00000430978 CDC42BPBQ9Y5S2 1711 aa34.78■■■■□ 3.16
LINC00454-202ENST00000430978 MTUS2Q5JR59 1369 aa34.74■■■■□ 3.15
LINC00454-202ENST00000430978 PREX2Q70Z35 1606 aa34.73■■■■□ 3.15
LINC00454-202ENST00000430978 CDC42BPAQ5VT25 1732 aa34.72■■■■□ 3.15
LINC00454-202ENST00000430978 POGZQ7Z3K3 1410 aa34.71■■■■□ 3.15
LINC00454-202ENST00000430978 ARID4BQ4LE39 1312 aaPredicted RBP34.7■■■■□ 3.15
LINC00454-202ENST00000430978 ZMYM4Q5VZL5 1548 aa34.7■■■■□ 3.15
LINC00454-202ENST00000430978 ARHGEF40Q8TER5 1519 aa34.69■■■■□ 3.14
LINC00454-202ENST00000430978 ZFYVE16Q7Z3T8 1539 aa34.66■■■■□ 3.14
LINC00454-202ENST00000430978 MAGI2Q86UL8 1455 aa34.65■■■■□ 3.14
LINC00454-202ENST00000430978 ZNF518AQ6AHZ1 1483 aa34.62■■■■□ 3.13
LINC00454-202ENST00000430978 MYT1LQ9UL68 1186 aa34.61■■■■□ 3.13
LINC00454-202ENST00000430978 ZNF777Q9ULD5 760 aaPredicted RBP34.61■■■■□ 3.13
LINC00454-202ENST00000430978 VPS8Q8N3P4 1428 aa34.61■■■■□ 3.13
LINC00454-202ENST00000430978 YEATS2Q9ULM3 1422 aa34.61■■■■□ 3.13
LINC00454-202ENST00000430978 AFAP1Q8N556 730 aa34.6■■■■□ 3.13
LINC00454-202ENST00000430978 CCNB3Q8WWL7 1395 aa34.59■■■■□ 3.13
LINC00454-202ENST00000430978 EHBP1L1Q8N3D4 1523 aa34.59■■■■□ 3.13
LINC00454-202ENST00000430978 GPATCH8Q9UKJ3 1502 aaKnown RBP34.59■■■■□ 3.13
LINC00454-202ENST00000430978 ABCC1P33527 1531 aa34.55■■■■□ 3.12
LINC00454-202ENST00000430978 CFDP1Q9UEE9 299 aaPredicted RBP34.55■■■■□ 3.12
LINC00454-202ENST00000430978 BCORL1Q5H9F3 1711 aa34.54■■■■□ 3.12
LINC00454-202ENST00000430978 ITSN2Q9NZM3 1697 aa34.54■■■■□ 3.12
LINC00454-202ENST00000430978 ADAMTSL3P82987 1691 aa34.52■■■■□ 3.12
LINC00454-202ENST00000430978 KDM5CP41229 1560 aa34.51■■■■□ 3.11
LINC00454-202ENST00000430978 ARHGEF12Q9NZN5 1544 aa34.51■■■■□ 3.11
LINC00454-202ENST00000430978 TIAM1Q13009 1591 aa34.5■■■■□ 3.11
LINC00454-202ENST00000430978 ATP10AO60312 1499 aa34.49■■■■□ 3.11
LINC00454-202ENST00000430978 TRAPPC8Q9Y2L5 1435 aa34.49■■■■□ 3.11
LINC00454-202ENST00000430978 SAMD9LQ8IVG5 1584 aa34.49■■■■□ 3.11
LINC00454-202ENST00000430978 HECW2Q9P2P5 1572 aa34.48■■■■□ 3.11
LINC00454-202ENST00000430978 SUPT6HQ7KZ85 1726 aaKnown RBP34.45■■■■□ 3.11
LINC00454-202ENST00000430978 SIGLEC1Q9BZZ2 1709 aa34.45■■■■□ 3.1
LINC00454-202ENST00000430978 C9orf84Q5VXU9 1444 aa34.44■■■■□ 3.1
LINC00454-202ENST00000430978 HNRNPMP52272 730 aaKnown RBP eCLIP34.43■■■■□ 3.1
LINC00454-202ENST00000430978 MADDQ8WXG6 1647 aa34.43■■■■□ 3.1
LINC00454-202ENST00000430978 MLECQ14165 292 aa34.42■■■■□ 3.1
LINC00454-202ENST00000430978 SYCP2Q9BX26 1530 aa34.42■■■■□ 3.1
LINC00454-202ENST00000430978 MLH3Q9UHC1 1453 aa34.41■■■■□ 3.1
LINC00454-202ENST00000430978 PLEKHH2Q8IVE3 1493 aa34.4■■■■□ 3.1
LINC00454-202ENST00000430978 PTPRMP28827 1452 aa34.39■■■■□ 3.1
LINC00454-202ENST00000430978 NCOA2Q15596 1464 aa34.39■■■■□ 3.1
LINC00454-202ENST00000430978 KIAA1107Q9UPP5 1409 aa34.36■■■■□ 3.09
LINC00454-202ENST00000430978 LRRC9Q6ZRR7 1453 aa34.36■■■■□ 3.09
LINC00454-202ENST00000430978 DIP2CQ9Y2E4 1556 aa34.36■■■■□ 3.09
LINC00454-202ENST00000430978 RIMS1Q86UR5 1692 aaKnown RBP34.35■■■■□ 3.09
LINC00454-202ENST00000430978 ABCA6Q8N139 1617 aa34.35■■■■□ 3.09
LINC00454-202ENST00000430978 APLP2Q06481 763 aa34.34■■■■□ 3.09
LINC00454-202ENST00000430978 KIDINS220Q9ULH0 1771 aa34.33■■■■□ 3.09
LINC00454-202ENST00000430978 MAP3K1Q13233 1512 aa34.33■■■■□ 3.09
LINC00454-202ENST00000430978 SPAG9O60271 1321 aaKnown RBP34.33■■■■□ 3.09
LINC00454-202ENST00000430978 ZNF644Q9H582 1327 aaPredicted RBP34.33■■■■□ 3.09
LINC00454-202ENST00000430978 KANK4Q5T7N3 995 aaPredicted RBP34.29■■■■□ 3.08
LINC00454-202ENST00000430978 FER1L4A9Z1Z3 1794 aa34.28■■■■□ 3.08
LINC00454-202ENST00000430978 PLPPR3Q6T4P5 718 aa34.27■■■■□ 3.08
LINC00454-202ENST00000430978 REREQ9P2R6 1566 aa34.26■■■■□ 3.07
LINC00454-202ENST00000430978 ATP7AQ04656 1500 aa34.21■■■■□ 3.07
LINC00454-202ENST00000430978 CAMSAP2Q08AD1 1489 aa34.18■■■■□ 3.06
LINC00454-202ENST00000430978 MBD5Q9P267 1494 aa34.18■■■■□ 3.06
LINC00454-202ENST00000430978 INO80Q9ULG1 1556 aaPredicted RBP34.17■■■■□ 3.06
LINC00454-202ENST00000430978 AGLP35573 1532 aa34.16■■■■□ 3.06
LINC00454-202ENST00000430978 RSPH4AQ5TD94 716 aa34.12■■■■□ 3.05
LINC00454-202ENST00000430978 ESF1Q9H501 851 aaKnown RBP34.12■■■■□ 3.05
LINC00454-202ENST00000430978 CCDC141Q6ZP82 1450 aa34.09■■■■□ 3.05
LINC00454-202ENST00000430978 ADGBQ8N7X0 1667 aa34.07■■■■□ 3.05
LINC00454-202ENST00000430978 A2MP01023 1474 aa34.07■■■■□ 3.04
LINC00454-202ENST00000430978 MYOM3Q5VTT5 1437 aa34.07■■■■□ 3.04
LINC00454-202ENST00000430978 RTEL1-TNFRSF6BF6WH68 1400 aa34.05■■■■□ 3.04
LINC00454-202ENST00000430978 TSPY4P0CV99 314 aa34.04■■■■□ 3.04
LINC00454-202ENST00000430978 TSPY10P0CW01 314 aa34.04■■■■□ 3.04
LINC00454-202ENST00000430978 CEBPAP49715 358 aaPredicted RBP34.04■■■■□ 3.04
LINC00454-202ENST00000430978 MIA2Q96PC5 1412 aa34.03■■■■□ 3.04
LINC00454-202ENST00000430978 ARHGEF5Q12774 1597 aa34.02■■■■□ 3.04
LINC00454-202ENST00000430978 PLXNC1O60486 1568 aa33.99■■■■□ 3.03
LINC00454-202ENST00000430978 LMTK3Q96Q04 1460 aa33.95■■■■□ 3.03
LINC00454-202ENST00000430978 GGT6Q6P531 493 aa33.95■■■■□ 3.03
LINC00454-202ENST00000430978 CNTLNQ9NXG0 1405 aa33.93■■■■□ 3.02
LINC00454-202ENST00000430978 C3P01024 1663 aa33.93■■■■□ 3.02
LINC00454-202ENST00000430978 DHX29Q7Z478 1369 aaKnown RBP33.92■■■■□ 3.02
LINC00454-202ENST00000430978 SETD1BQ9UPS6 1966 aaKnown RBP33.91■■■■□ 3.02
LINC00454-202ENST00000430978 PTPN23Q9H3S7 1636 aa33.88■■■■□ 3.01
LINC00454-202ENST00000430978 PREX1Q8TCU6 1659 aa33.87■■■■□ 3.01
LINC00454-202ENST00000430978 CLTCQ00610 1675 aaKnown RBP33.85■■■■□ 3.01
LINC00454-202ENST00000430978 KIF3BO15066 747 aa33.85■■■■□ 3.01
LINC00454-202ENST00000430978 HSPA2P54652 639 aa33.85■■■■□ 3.01
LINC00454-202ENST00000430978 MROH2AA6NES4 1674 aa33.84■■■■□ 3.01
LINC00454-202ENST00000430978 MAST1Q9Y2H9 1570 aa33.83■■■■□ 3.01
LINC00454-202ENST00000430978 FGD6Q6ZV73 1430 aa33.83■■■■□ 3.01
LINC00454-202ENST00000430978 PPP6R1Q9UPN7 881 aa33.82■■■■□ 3.01
LINC00454-202ENST00000430978 ZMYM3Q14202 1370 aa33.81■■■■□ 3
LINC00454-202ENST00000430978 UHRF1BP1Q6BDS2 1440 aa33.78■■■■□ 3
LINC00454-202ENST00000430978 TCOF1Q13428 1488 aaKnown RBP33.75■■■□□ 2.99
LINC00454-202ENST00000430978 ABCC5O15440 1437 aa33.73■■■□□ 2.99
LINC00454-202ENST00000430978 CROCC2H7BZ55 1655 aa33.73■■■□□ 2.99
LINC00454-202ENST00000430978 DNMT1P26358 1616 aaKnown RBP33.7■■■□□ 2.99
LINC00454-202ENST00000430978 DAPK1P53355 1430 aa33.7■■■□□ 2.99
LINC00454-202ENST00000430978 FAM50AQ14320 339 aaKnown RBP33.69■■■□□ 2.98
LINC00454-202ENST00000430978 NPATQ14207 1427 aa33.68■■■□□ 2.98
LINC00454-202ENST00000430978 SHANK2Q9UPX8 1470 aa33.68■■■□□ 2.98
LINC00454-202ENST00000430978 WASHC2CQ9Y4E1 1318 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms