RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 PLCH2O75038 1416 aa17.04■□□□□ 0.32
CHD4-202ENST00000430771 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
CHD4-202ENST00000430771 FANCAO15360 1455 aa17.01■□□□□ 0.31
CHD4-202ENST00000430771 NEO1Q92859 1461 aa17.01■□□□□ 0.31
CHD4-202ENST00000430771 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
CHD4-202ENST00000430771 MIA2Q96PC5 1412 aa16.99■□□□□ 0.31
CHD4-202ENST00000430771 SAMD9LQ8IVG5 1584 aa16.98■□□□□ 0.31
CHD4-202ENST00000430771 FGD6Q6ZV73 1430 aa16.97■□□□□ 0.31
CHD4-202ENST00000430771 ABCC1P33527 1531 aa16.97■□□□□ 0.31
CHD4-202ENST00000430771 PTPN23Q9H3S7 1636 aa16.97■□□□□ 0.31
CHD4-202ENST00000430771 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
CHD4-202ENST00000430771 PLEKHH2Q8IVE3 1493 aa16.97■□□□□ 0.31
CHD4-202ENST00000430771 CAMSAP2Q08AD1 1489 aa16.95■□□□□ 0.3
CHD4-202ENST00000430771 CFDP1Q9UEE9 299 aaPredicted RBP16.95■□□□□ 0.3
CHD4-202ENST00000430771 ADGRL1O94910 1474 aa16.94■□□□□ 0.3
CHD4-202ENST00000430771 EFCAB2Q5VUJ9 269 aa16.94■□□□□ 0.3
CHD4-202ENST00000430771 TCOF1Q13428 1488 aaKnown RBP16.93■□□□□ 0.3
CHD4-202ENST00000430771 AKNAQ7Z591 1439 aa16.93■□□□□ 0.3
CHD4-202ENST00000430771 SYCP2Q9BX26 1530 aa16.92■□□□□ 0.3
CHD4-202ENST00000430771 RRBP1Q9P2E9 1410 aaKnown RBP16.9■□□□□ 0.3
CHD4-202ENST00000430771 KDM6BO15054 1643 aa16.9■□□□□ 0.3
CHD4-202ENST00000430771 KIAA1107Q9UPP5 1409 aa16.89■□□□□ 0.29
CHD4-202ENST00000430771 ZNF777Q9ULD5 760 aaPredicted RBP16.89■□□□□ 0.29
CHD4-202ENST00000430771 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
CHD4-202ENST00000430771 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
CHD4-202ENST00000430771 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
CHD4-202ENST00000430771 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
CHD4-202ENST00000430771 RICTORQ6R327 1708 aa16.87■□□□□ 0.29
CHD4-202ENST00000430771 POGZQ7Z3K3 1410 aa16.87■□□□□ 0.29
CHD4-202ENST00000430771 ZNF518AQ6AHZ1 1483 aa16.86■□□□□ 0.29
CHD4-202ENST00000430771 SCAPERQ9BY12 1400 aa16.86■□□□□ 0.29
CHD4-202ENST00000430771 CCDC141Q6ZP82 1450 aa16.86■□□□□ 0.29
CHD4-202ENST00000430771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.85■□□□□ 0.29
CHD4-202ENST00000430771 KDM5CP41229 1560 aa16.85■□□□□ 0.29
CHD4-202ENST00000430771 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
CHD4-202ENST00000430771 ZMYM4Q5VZL5 1548 aa16.84■□□□□ 0.29
CHD4-202ENST00000430771 ARHGEF12Q9NZN5 1544 aa16.83■□□□□ 0.28
CHD4-202ENST00000430771 HECW2Q9P2P5 1572 aa16.82■□□□□ 0.28
CHD4-202ENST00000430771 MBD5Q9P267 1494 aa16.82■□□□□ 0.28
CHD4-202ENST00000430771 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
CHD4-202ENST00000430771 ZNF644Q9H582 1327 aaPredicted RBP16.81■□□□□ 0.28
CHD4-202ENST00000430771 FAM50AQ14320 339 aaKnown RBP16.81■□□□□ 0.28
CHD4-202ENST00000430771 ADGBQ8N7X0 1667 aa16.8■□□□□ 0.28
CHD4-202ENST00000430771 INO80Q9ULG1 1556 aaPredicted RBP16.8■□□□□ 0.28
CHD4-202ENST00000430771 MAST1Q9Y2H9 1570 aa16.8■□□□□ 0.28
CHD4-202ENST00000430771 DAPK1P53355 1430 aa16.79■□□□□ 0.28
CHD4-202ENST00000430771 TRAPPC8Q9Y2L5 1435 aa16.79■□□□□ 0.28
CHD4-202ENST00000430771 RSPH4AQ5TD94 716 aa16.79■□□□□ 0.28
CHD4-202ENST00000430771 ZFYVE16Q7Z3T8 1539 aa16.79■□□□□ 0.28
CHD4-202ENST00000430771 ATP7AQ04656 1500 aa16.77■□□□□ 0.28
CHD4-202ENST00000430771 COL17A1Q9UMD9 1497 aaPredicted RBP16.77■□□□□ 0.28
CHD4-202ENST00000430771 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
CHD4-202ENST00000430771 MAGI2Q86UL8 1455 aa16.76■□□□□ 0.27
CHD4-202ENST00000430771 HNRNPMP52272 730 aaKnown RBP eCLIP16.76■□□□□ 0.273e-8■■■■■ 43.4
CHD4-202ENST00000430771 ABCC5O15440 1437 aa16.75■□□□□ 0.27
CHD4-202ENST00000430771 C9orf84Q5VXU9 1444 aa16.75■□□□□ 0.27
CHD4-202ENST00000430771 PLXNC1O60486 1568 aa16.75■□□□□ 0.27
CHD4-202ENST00000430771 MLH3Q9UHC1 1453 aa16.74■□□□□ 0.27
CHD4-202ENST00000430771 KIDINS220Q9ULH0 1771 aa16.74■□□□□ 0.27
CHD4-202ENST00000430771 RTEL1-TNFRSF6BF6WH68 1400 aa16.73■□□□□ 0.27
CHD4-202ENST00000430771 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
CHD4-202ENST00000430771 RAPGEF3O95398 923 aa16.72■□□□□ 0.27
CHD4-202ENST00000430771 ADGRL2O95490 1459 aa16.72■□□□□ 0.27
CHD4-202ENST00000430771 SPAG9O60271 1321 aaKnown RBP16.71■□□□□ 0.27
CHD4-202ENST00000430771 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
CHD4-202ENST00000430771 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
CHD4-202ENST00000430771 DIP2CQ9Y2E4 1556 aa16.71■□□□□ 0.27
CHD4-202ENST00000430771 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
CHD4-202ENST00000430771 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
CHD4-202ENST00000430771 ANKRD30AQ9BXX3 1397 aa16.67■□□□□ 0.26
CHD4-202ENST00000430771 GCC2Q8IWJ2 1684 aa16.67■□□□□ 0.26
CHD4-202ENST00000430771 REREQ9P2R6 1566 aa16.67■□□□□ 0.26
CHD4-202ENST00000430771 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
CHD4-202ENST00000430771 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
CHD4-202ENST00000430771 YEATS2Q9ULM3 1422 aa16.65■□□□□ 0.26
CHD4-202ENST00000430771 ITGAEP38570 1179 aa16.65■□□□□ 0.26
CHD4-202ENST00000430771 DUOX2Q9NRD8 1548 aa16.65■□□□□ 0.26
CHD4-202ENST00000430771 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
CHD4-202ENST00000430771 TRIM26Q12899 539 aaPredicted RBP16.63■□□□□ 0.25
CHD4-202ENST00000430771 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
CHD4-202ENST00000430771 NCOA1Q15788 1441 aa16.62■□□□□ 0.25
CHD4-202ENST00000430771 ATP10AO60312 1499 aa16.62■□□□□ 0.25
CHD4-202ENST00000430771 A2MP01023 1474 aa16.61■□□□□ 0.25
CHD4-202ENST00000430771 CHIC2Q9UKJ5 165 aa16.61■□□□□ 0.25
CHD4-202ENST00000430771 ERBINQ96RT1 1412 aa16.61■□□□□ 0.25
CHD4-202ENST00000430771 BCORL1Q5H9F3 1711 aa16.6■□□□□ 0.25
CHD4-202ENST00000430771 HFM1A2PYH4 1435 aa16.6■□□□□ 0.25
CHD4-202ENST00000430771 AGLP35573 1532 aa16.58■□□□□ 0.24
CHD4-202ENST00000430771 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
CHD4-202ENST00000430771 NAIPQ13075 1403 aa16.55■□□□□ 0.24
CHD4-202ENST00000430771 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
CHD4-202ENST00000430771 RNF17Q9BXT8 1623 aaKnown RBP16.55■□□□□ 0.24
CHD4-202ENST00000430771 SIGLEC1Q9BZZ2 1709 aa16.54■□□□□ 0.24
CHD4-202ENST00000430771 RRP7BPQ9NSQ0 103 aa16.54■□□□□ 0.24
CHD4-202ENST00000430771 DEPDC5O75140 1603 aa16.53■□□□□ 0.24
CHD4-202ENST00000430771 UNC13BO14795 1591 aa16.52■□□□□ 0.24
CHD4-202ENST00000430771 FAM135AQ9P2D6 1515 aa16.51■□□□□ 0.23
CHD4-202ENST00000430771 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
CHD4-202ENST00000430771 SETD5Q9C0A6 1442 aa16.5■□□□□ 0.23
CHD4-202ENST00000430771 ZC3H13Q5T200 1668 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms