RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 ARHGAP5Q13017 1502 aa28.11■■■□□ 2.09
CDC42EP1-203ENST00000430687 CFAP74Q9C0B2 1584 aa28.11■■■□□ 2.09
CDC42EP1-203ENST00000430687 CFDP1Q9UEE9 299 aaPredicted RBP28.09■■■□□ 2.09
CDC42EP1-203ENST00000430687 CDC42BPAQ5VT25 1732 aa28.09■■■□□ 2.09
CDC42EP1-203ENST00000430687 AKNAQ7Z591 1439 aa28.09■■■□□ 2.09
CDC42EP1-203ENST00000430687 CDC42BPBQ9Y5S2 1711 aa28.06■■■□□ 2.08
CDC42EP1-203ENST00000430687 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
CDC42EP1-203ENST00000430687 MYOM3Q5VTT5 1437 aa28.04■■■□□ 2.08
CDC42EP1-203ENST00000430687 MIA2Q96PC5 1412 aa28.02■■■□□ 2.08
CDC42EP1-203ENST00000430687 ADGRL1O94910 1474 aa27.99■■■□□ 2.07
CDC42EP1-203ENST00000430687 PLEKHH2Q8IVE3 1493 aa27.98■■■□□ 2.07
CDC42EP1-203ENST00000430687 PPARGC1BQ86YN6 1023 aaKnown RBP27.98■■■□□ 2.07
CDC42EP1-203ENST00000430687 ZNF777Q9ULD5 760 aaPredicted RBP27.98■■■□□ 2.07
CDC42EP1-203ENST00000430687 KDM6BO15054 1643 aa27.98■■■□□ 2.07
CDC42EP1-203ENST00000430687 COL17A1Q9UMD9 1497 aaPredicted RBP27.97■■■□□ 2.07
CDC42EP1-203ENST00000430687 SCAPERQ9BY12 1400 aa27.97■■■□□ 2.07
CDC42EP1-203ENST00000430687 KIAA1107Q9UPP5 1409 aa27.96■■■□□ 2.07
CDC42EP1-203ENST00000430687 DENND4BO75064 1496 aaPredicted RBP27.95■■■□□ 2.07
CDC42EP1-203ENST00000430687 SAMD9LQ8IVG5 1584 aa27.94■■■□□ 2.06
CDC42EP1-203ENST00000430687 ABCC1P33527 1531 aa27.92■■■□□ 2.06
CDC42EP1-203ENST00000430687 FGD6Q6ZV73 1430 aa27.92■■■□□ 2.06
CDC42EP1-203ENST00000430687 ZNF644Q9H582 1327 aaPredicted RBP27.91■■■□□ 2.06
CDC42EP1-203ENST00000430687 RAPGEF3O95398 923 aa27.89■■■□□ 2.06
CDC42EP1-203ENST00000430687 POGZQ7Z3K3 1410 aa27.88■■■□□ 2.05
CDC42EP1-203ENST00000430687 CAMSAP2Q08AD1 1489 aa27.88■■■□□ 2.05
CDC42EP1-203ENST00000430687 ARHGEF12Q9NZN5 1544 aa27.87■■■□□ 2.05
CDC42EP1-203ENST00000430687 RSPH4AQ5TD94 716 aa27.87■■■□□ 2.05
CDC42EP1-203ENST00000430687 HNRNPMP52272 730 aaKnown RBP eCLIP27.86■■■□□ 2.05
CDC42EP1-203ENST00000430687 ZNF518AQ6AHZ1 1483 aa27.86■■■□□ 2.05
CDC42EP1-203ENST00000430687 TCOF1Q13428 1488 aaKnown RBP27.84■■■□□ 2.05
CDC42EP1-203ENST00000430687 SYCP2Q9BX26 1530 aa27.84■■■□□ 2.05
CDC42EP1-203ENST00000430687 MBD5Q9P267 1494 aa27.83■■■□□ 2.05
CDC42EP1-203ENST00000430687 PTPN23Q9H3S7 1636 aa27.82■■■□□ 2.04
CDC42EP1-203ENST00000430687 AFAP1Q8N556 730 aa27.82■■■□□ 2.04
CDC42EP1-203ENST00000430687 TRAPPC8Q9Y2L5 1435 aa27.82■■■□□ 2.04
CDC42EP1-203ENST00000430687 FRMPD1Q5SYB0 1578 aa27.82■■■□□ 2.04
CDC42EP1-203ENST00000430687 RICTORQ6R327 1708 aa27.81■■■□□ 2.04
CDC42EP1-203ENST00000430687 KDM5CP41229 1560 aa27.78■■■□□ 2.04
CDC42EP1-203ENST00000430687 ZMYM4Q5VZL5 1548 aa27.78■■■□□ 2.04
CDC42EP1-203ENST00000430687 MAGI2Q86UL8 1455 aa27.78■■■□□ 2.04
CDC42EP1-203ENST00000430687 ARHGEF5Q12774 1597 aa27.77■■■□□ 2.04
CDC42EP1-203ENST00000430687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.76■■■□□ 2.035e-8■■■■■ 39.3
CDC42EP1-203ENST00000430687 CCDC141Q6ZP82 1450 aa27.76■■■□□ 2.03
CDC42EP1-203ENST00000430687 RRBP1Q9P2E9 1410 aaKnown RBP27.75■■■□□ 2.03
CDC42EP1-203ENST00000430687 MLH3Q9UHC1 1453 aa27.74■■■□□ 2.03
CDC42EP1-203ENST00000430687 FAM50AQ14320 339 aaKnown RBP27.72■■■□□ 2.03
CDC42EP1-203ENST00000430687 SPAG9O60271 1321 aaKnown RBP27.71■■■□□ 2.03
CDC42EP1-203ENST00000430687 TSPY4P0CV99 314 aa27.71■■■□□ 2.03
CDC42EP1-203ENST00000430687 TSPY10P0CW01 314 aa27.71■■■□□ 2.03
CDC42EP1-203ENST00000430687 RTEL1-TNFRSF6BF6WH68 1400 aa27.69■■■□□ 2.02
CDC42EP1-203ENST00000430687 HECW2Q9P2P5 1572 aa27.68■■■□□ 2.02
CDC42EP1-203ENST00000430687 MYT1LQ9UL68 1186 aa27.66■■■□□ 2.02
CDC42EP1-203ENST00000430687 ZFYVE16Q7Z3T8 1539 aa27.66■■■□□ 2.02
CDC42EP1-203ENST00000430687 ABCC5O15440 1437 aa27.66■■■□□ 2.02
CDC42EP1-203ENST00000430687 DAPK1P53355 1430 aa27.66■■■□□ 2.02
CDC42EP1-203ENST00000430687 DNMT1P26358 1616 aaKnown RBP27.65■■■□□ 2.02
CDC42EP1-203ENST00000430687 YEATS2Q9ULM3 1422 aa27.63■■■□□ 2.01
CDC42EP1-203ENST00000430687 SHANK2Q9UPX8 1470 aa27.63■■■□□ 2.01
CDC42EP1-203ENST00000430687 INO80Q9ULG1 1556 aaPredicted RBP27.62■■■□□ 2.01
CDC42EP1-203ENST00000430687 ATP7AQ04656 1500 aa27.62■■■□□ 2.01
CDC42EP1-203ENST00000430687 ARHGEF40Q8TER5 1519 aa27.62■■■□□ 2.01
CDC42EP1-203ENST00000430687 MAST1Q9Y2H9 1570 aa27.61■■■□□ 2.01
CDC42EP1-203ENST00000430687 KIDINS220Q9ULH0 1771 aa27.6■■■□□ 2.01
CDC42EP1-203ENST00000430687 C9orf84Q5VXU9 1444 aa27.59■■■□□ 2.01
CDC42EP1-203ENST00000430687 ATP10AO60312 1499 aa27.59■■■□□ 2.01
CDC42EP1-203ENST00000430687 CROCC2H7BZ55 1655 aa27.56■■■□□ 2
CDC42EP1-203ENST00000430687 DIP2CQ9Y2E4 1556 aa27.55■■■□□ 2
CDC42EP1-203ENST00000430687 ABCA6Q8N139 1617 aa27.53■■■□□ 2
CDC42EP1-203ENST00000430687 REREQ9P2R6 1566 aa27.52■■■□□ 2
CDC42EP1-203ENST00000430687 ANKRD30AQ9BXX3 1397 aa27.5■■□□□ 1.99
CDC42EP1-203ENST00000430687 ADGRL2O95490 1459 aa27.5■■□□□ 1.99
CDC42EP1-203ENST00000430687 PTPRKQ15262 1439 aa27.5■■□□□ 1.99
CDC42EP1-203ENST00000430687 PLXNC1O60486 1568 aa27.49■■□□□ 1.99
CDC42EP1-203ENST00000430687 CHIC2Q9UKJ5 165 aa27.49■■□□□ 1.99
CDC42EP1-203ENST00000430687 A2MP01023 1474 aa27.48■■□□□ 1.99
CDC42EP1-203ENST00000430687 NCOA1Q15788 1441 aa27.48■■□□□ 1.99
CDC42EP1-203ENST00000430687 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
CDC42EP1-203ENST00000430687 DHX29Q7Z478 1369 aaKnown RBP27.48■■□□□ 1.99
CDC42EP1-203ENST00000430687 ITGAEP38570 1179 aa27.47■■□□□ 1.99
CDC42EP1-203ENST00000430687 ADGBQ8N7X0 1667 aa27.46■■□□□ 1.99
CDC42EP1-203ENST00000430687 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
CDC42EP1-203ENST00000430687 AGLP35573 1532 aa27.44■■□□□ 1.98
CDC42EP1-203ENST00000430687 RRP7BPQ9NSQ0 103 aa27.43■■□□□ 1.98
CDC42EP1-203ENST00000430687 KIF15Q9NS87 1388 aa27.43■■□□□ 1.98
CDC42EP1-203ENST00000430687 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
CDC42EP1-203ENST00000430687 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
CDC42EP1-203ENST00000430687 ERBINQ96RT1 1412 aa27.35■■□□□ 1.97
CDC42EP1-203ENST00000430687 SIGLEC1Q9BZZ2 1709 aa27.34■■□□□ 1.97
CDC42EP1-203ENST00000430687 KIF3BO15066 747 aa27.31■■□□□ 1.96
CDC42EP1-203ENST00000430687 ANKRD50Q9ULJ7 1429 aa27.3■■□□□ 1.96
CDC42EP1-203ENST00000430687 EIF2AK4Q9P2K8 1649 aaKnown RBP27.3■■□□□ 1.96
CDC42EP1-203ENST00000430687 PPP6R1Q9UPN7 881 aa27.29■■□□□ 1.96
CDC42EP1-203ENST00000430687 BCORL1Q5H9F3 1711 aa27.29■■□□□ 1.96
CDC42EP1-203ENST00000430687 HFM1A2PYH4 1435 aa27.27■■□□□ 1.96
CDC42EP1-203ENST00000430687 MLECQ14165 292 aa27.26■■□□□ 1.95
CDC42EP1-203ENST00000430687 NAIPQ13075 1403 aa27.25■■□□□ 1.95
CDC42EP1-203ENST00000430687 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
CDC42EP1-203ENST00000430687 GGT6Q6P531 493 aa27.24■■□□□ 1.95
CDC42EP1-203ENST00000430687 ADAMTSL3P82987 1691 aa27.21■■□□□ 1.95
CDC42EP1-203ENST00000430687 KDM4FA0A1W2PPD8 638 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms