RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CDC42BPAQ5VT25 1732 aa27.36■■□□□ 1.97
UBE3D-204ENST00000430071 ZMYM4Q5VZL5 1548 aa27.36■■□□□ 1.97
UBE3D-204ENST00000430071 YEATS2Q9ULM3 1422 aa27.35■■□□□ 1.97
UBE3D-204ENST00000430071 BCORL1Q5H9F3 1711 aa27.35■■□□□ 1.97
UBE3D-204ENST00000430071 LOC105371045A0A1W2PR82 267 aa27.35■■□□□ 1.97
UBE3D-204ENST00000430071 ARHGAP5Q13017 1502 aa27.34■■□□□ 1.97
UBE3D-204ENST00000430071 EFCAB2Q5VUJ9 269 aa27.34■■□□□ 1.97
UBE3D-204ENST00000430071 PREX2Q70Z35 1606 aa27.33■■□□□ 1.97
UBE3D-204ENST00000430071 CEP162Q5TB80 1403 aa27.32■■□□□ 1.96
UBE3D-204ENST00000430071 POGZQ7Z3K3 1410 aa27.31■■□□□ 1.96
UBE3D-204ENST00000430071 ZFYVE16Q7Z3T8 1539 aa27.3■■□□□ 1.96
UBE3D-204ENST00000430071 ARID4BQ4LE39 1312 aaPredicted RBP27.28■■□□□ 1.96
UBE3D-204ENST00000430071 MADDQ8WXG6 1647 aa27.28■■□□□ 1.96
UBE3D-204ENST00000430071 ARHGEF12Q9NZN5 1544 aa27.23■■□□□ 1.95
UBE3D-204ENST00000430071 HECW2Q9P2P5 1572 aa27.23■■□□□ 1.95
UBE3D-204ENST00000430071 AFAP1Q8N556 730 aa27.22■■□□□ 1.95
UBE3D-204ENST00000430071 ITSN2Q9NZM3 1697 aa27.22■■□□□ 1.95
UBE3D-204ENST00000430071 MAGI2Q86UL8 1455 aa27.21■■□□□ 1.95
UBE3D-204ENST00000430071 RIMS1Q86UR5 1692 aaKnown RBP27.21■■□□□ 1.95
UBE3D-204ENST00000430071 PTPRMP28827 1452 aa27.2■■□□□ 1.94
UBE3D-204ENST00000430071 KDM5CP41229 1560 aa27.2■■□□□ 1.94
UBE3D-204ENST00000430071 ABCC1P33527 1531 aa27.19■■□□□ 1.94
UBE3D-204ENST00000430071 TRAPPC8Q9Y2L5 1435 aa27.17■■□□□ 1.94
UBE3D-204ENST00000430071 ZNF518AQ6AHZ1 1483 aa27.16■■□□□ 1.94
UBE3D-204ENST00000430071 SAMD9LQ8IVG5 1584 aa27.16■■□□□ 1.94
UBE3D-204ENST00000430071 GPATCH8Q9UKJ3 1502 aaKnown RBP27.16■■□□□ 1.94
UBE3D-204ENST00000430071 ATP10AO60312 1499 aa27.14■■□□□ 1.94
UBE3D-204ENST00000430071 ABCA6Q8N139 1617 aa27.12■■□□□ 1.93
UBE3D-204ENST00000430071 MLECQ14165 292 aa27.12■■□□□ 1.93
UBE3D-204ENST00000430071 MTUS2Q5JR59 1369 aa27.12■■□□□ 1.93
UBE3D-204ENST00000430071 ZNF777Q9ULD5 760 aaPredicted RBP27.11■■□□□ 1.93
UBE3D-204ENST00000430071 DIP2CQ9Y2E4 1556 aa27.11■■□□□ 1.93
UBE3D-204ENST00000430071 FER1L4A9Z1Z3 1794 aa27.11■■□□□ 1.93
UBE3D-204ENST00000430071 KIDINS220Q9ULH0 1771 aa27.1■■□□□ 1.93
UBE3D-204ENST00000430071 C9orf84Q5VXU9 1444 aa27.08■■□□□ 1.93
UBE3D-204ENST00000430071 TIAM1Q13009 1591 aa27.08■■□□□ 1.92
UBE3D-204ENST00000430071 SYCP2Q9BX26 1530 aa27.07■■□□□ 1.92
UBE3D-204ENST00000430071 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
UBE3D-204ENST00000430071 EHBP1L1Q8N3D4 1523 aa27.06■■□□□ 1.92
UBE3D-204ENST00000430071 MLH3Q9UHC1 1453 aa27.04■■□□□ 1.92
UBE3D-204ENST00000430071 CCNB3Q8WWL7 1395 aa27.04■■□□□ 1.92
UBE3D-204ENST00000430071 HNRNPMP52272 730 aaKnown RBP eCLIP27.04■■□□□ 1.92
UBE3D-204ENST00000430071 PLPPR3Q6T4P5 718 aa27.04■■□□□ 1.92
UBE3D-204ENST00000430071 CFDP1Q9UEE9 299 aaPredicted RBP27.01■■□□□ 1.91
UBE3D-204ENST00000430071 ZNF644Q9H582 1327 aaPredicted RBP27■■□□□ 1.91
UBE3D-204ENST00000430071 VPS8Q8N3P4 1428 aa26.99■■□□□ 1.91
UBE3D-204ENST00000430071 REREQ9P2R6 1566 aa26.97■■□□□ 1.91
UBE3D-204ENST00000430071 SUPT6HQ7KZ85 1726 aaKnown RBP26.97■■□□□ 1.91
UBE3D-204ENST00000430071 NCOA2Q15596 1464 aa26.93■■□□□ 1.9
UBE3D-204ENST00000430071 KIAA1107Q9UPP5 1409 aa26.92■■□□□ 1.9
UBE3D-204ENST00000430071 LMTK3Q96Q04 1460 aa26.92■■□□□ 1.9
UBE3D-204ENST00000430071 INO80Q9ULG1 1556 aaPredicted RBP26.9■■□□□ 1.9
UBE3D-204ENST00000430071 CEBPAP49715 358 aaPredicted RBP26.9■■□□□ 1.9
UBE3D-204ENST00000430071 ATP7AQ04656 1500 aa26.89■■□□□ 1.9
UBE3D-204ENST00000430071 SPAG9O60271 1321 aaKnown RBP26.89■■□□□ 1.9
UBE3D-204ENST00000430071 PLEKHH2Q8IVE3 1493 aa26.89■■□□□ 1.9
UBE3D-204ENST00000430071 AGLP35573 1532 aa26.89■■□□□ 1.89
UBE3D-204ENST00000430071 KANK4Q5T7N3 995 aaPredicted RBP26.87■■□□□ 1.89
UBE3D-204ENST00000430071 LRRC9Q6ZRR7 1453 aa26.87■■□□□ 1.89
UBE3D-204ENST00000430071 MBD5Q9P267 1494 aa26.87■■□□□ 1.89
UBE3D-204ENST00000430071 C3P01024 1663 aa26.84■■□□□ 1.89
UBE3D-204ENST00000430071 HSPA2P54652 639 aa26.83■■□□□ 1.88
UBE3D-204ENST00000430071 SETD1BQ9UPS6 1966 aaKnown RBP26.82■■□□□ 1.88
UBE3D-204ENST00000430071 CAMSAP2Q08AD1 1489 aa26.8■■□□□ 1.88
UBE3D-204ENST00000430071 ADGBQ8N7X0 1667 aa26.79■■□□□ 1.88
UBE3D-204ENST00000430071 PLXNC1O60486 1568 aa26.78■■□□□ 1.88
UBE3D-204ENST00000430071 PREX1Q8TCU6 1659 aa26.78■■□□□ 1.88
UBE3D-204ENST00000430071 MAP3K1Q13233 1512 aa26.78■■□□□ 1.88
UBE3D-204ENST00000430071 A2MP01023 1474 aa26.76■■□□□ 1.87
UBE3D-204ENST00000430071 CLTCQ00610 1675 aaKnown RBP26.72■■□□□ 1.87
UBE3D-204ENST00000430071 CCDC141Q6ZP82 1450 aa26.71■■□□□ 1.87
UBE3D-204ENST00000430071 RTEL1-TNFRSF6BF6WH68 1400 aa26.68■■□□□ 1.86
UBE3D-204ENST00000430071 MROH2AA6NES4 1674 aa26.68■■□□□ 1.86
UBE3D-204ENST00000430071 ARHGEF5Q12774 1597 aa26.68■■□□□ 1.86
UBE3D-204ENST00000430071 ESF1Q9H501 851 aaKnown RBP26.66■■□□□ 1.86
UBE3D-204ENST00000430071 GGT6Q6P531 493 aa26.65■■□□□ 1.86
UBE3D-204ENST00000430071 MYOM3Q5VTT5 1437 aa26.64■■□□□ 1.86
UBE3D-204ENST00000430071 ILDR1Q86SU0 546 aaPredicted RBP26.64■■□□□ 1.86
UBE3D-204ENST00000430071 STRCQ7RTU9 1775 aa26.64■■□□□ 1.85
UBE3D-204ENST00000430071 CNTLNQ9NXG0 1405 aa26.62■■□□□ 1.85
UBE3D-204ENST00000430071 DHX29Q7Z478 1369 aaKnown RBP26.61■■□□□ 1.85
UBE3D-204ENST00000430071 ZMYM3Q14202 1370 aa26.6■■□□□ 1.85
UBE3D-204ENST00000430071 UHRF1BP1Q6BDS2 1440 aa26.59■■□□□ 1.85
UBE3D-204ENST00000430071 RSPH4AQ5TD94 716 aa26.58■■□□□ 1.84
UBE3D-204ENST00000430071 MIA2Q96PC5 1412 aa26.57■■□□□ 1.84
UBE3D-204ENST00000430071 APLP2Q06481 763 aa26.56■■□□□ 1.84
UBE3D-204ENST00000430071 MAST1Q9Y2H9 1570 aa26.55■■□□□ 1.84
UBE3D-204ENST00000430071 PTPN23Q9H3S7 1636 aa26.55■■□□□ 1.84
UBE3D-204ENST00000430071 KIF3BO15066 747 aa26.55■■□□□ 1.84
UBE3D-204ENST00000430071 TSPY4P0CV99 314 aa26.53■■□□□ 1.84
UBE3D-204ENST00000430071 TSPY10P0CW01 314 aa26.53■■□□□ 1.84
UBE3D-204ENST00000430071 CROCC2H7BZ55 1655 aa26.5■■□□□ 1.83
UBE3D-204ENST00000430071 PTPRKQ15262 1439 aa26.49■■□□□ 1.83
UBE3D-204ENST00000430071 NPATQ14207 1427 aa26.48■■□□□ 1.83
UBE3D-204ENST00000430071 CFAP65Q6ZU64 1925 aaKnown RBP26.48■■□□□ 1.83
UBE3D-204ENST00000430071 MYO3AQ8NEV4 1616 aa26.47■■□□□ 1.83
UBE3D-204ENST00000430071 ABCC5O15440 1437 aa26.45■■□□□ 1.82
UBE3D-204ENST00000430071 FGD6Q6ZV73 1430 aa26.45■■□□□ 1.82
UBE3D-204ENST00000430071 PPP6R1Q9UPN7 881 aa26.45■■□□□ 1.82
UBE3D-204ENST00000430071 ZNF142P52746 1687 aaPredicted RBP26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms