RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 GPATCH8Q9UKJ3 1502 aaKnown RBP26.21■■□□□ 1.79
LINC00887-203ENST00000429578 FGD6Q6ZV73 1430 aa26.16■■□□□ 1.78
LINC00887-203ENST00000429578 RRBP1Q9P2E9 1410 aaKnown RBP26.16■■□□□ 1.78
LINC00887-203ENST00000429578 MIA2Q96PC5 1412 aa26.15■■□□□ 1.78
LINC00887-203ENST00000429578 CD109Q6YHK3 1445 aa26.14■■□□□ 1.78
LINC00887-203ENST00000429578 PTPN23Q9H3S7 1636 aa26.13■■□□□ 1.77
LINC00887-203ENST00000429578 ARAP3Q8WWN8 1544 aa26.12■■□□□ 1.77
LINC00887-203ENST00000429578 COL17A1Q9UMD9 1497 aaPredicted RBP26.12■■□□□ 1.77
LINC00887-203ENST00000429578 PLCH2O75038 1416 aa26.12■■□□□ 1.77
LINC00887-203ENST00000429578 TRIM26Q12899 539 aaPredicted RBP26.09■■□□□ 1.77
LINC00887-203ENST00000429578 CFDP1Q9UEE9 299 aaPredicted RBP26.09■■□□□ 1.77
LINC00887-203ENST00000429578 ARHGAP5Q13017 1502 aa26.08■■□□□ 1.77
LINC00887-203ENST00000429578 TCOF1Q13428 1488 aaKnown RBP26.06■■□□□ 1.76
LINC00887-203ENST00000429578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.04■■□□□ 1.76
LINC00887-203ENST00000429578 SAMD9LQ8IVG5 1584 aa26.03■■□□□ 1.76
LINC00887-203ENST00000429578 CAMSAP2Q08AD1 1489 aa26.02■■□□□ 1.76
LINC00887-203ENST00000429578 CFAP74Q9C0B2 1584 aa26.02■■□□□ 1.76
LINC00887-203ENST00000429578 KDM4FA0A1W2PPD8 638 aa26■■□□□ 1.75
LINC00887-203ENST00000429578 FANCAO15360 1455 aa26■■□□□ 1.75
LINC00887-203ENST00000429578 EFCAB2Q5VUJ9 269 aa26■■□□□ 1.75
LINC00887-203ENST00000429578 FAM50AQ14320 339 aaKnown RBP25.99■■□□□ 1.75
LINC00887-203ENST00000429578 ZNF777Q9ULD5 760 aaPredicted RBP25.99■■□□□ 1.75
LINC00887-203ENST00000429578 ZNF644Q9H582 1327 aaPredicted RBP25.98■■□□□ 1.75
LINC00887-203ENST00000429578 PLEKHH2Q8IVE3 1493 aa25.95■■□□□ 1.74
LINC00887-203ENST00000429578 ABCC1P33527 1531 aa25.94■■□□□ 1.74
LINC00887-203ENST00000429578 DNMT1P26358 1616 aaKnown RBP25.93■■□□□ 1.74
LINC00887-203ENST00000429578 NEO1Q92859 1461 aa25.92■■□□□ 1.74
LINC00887-203ENST00000429578 SYCP2Q9BX26 1530 aa25.9■■□□□ 1.74
LINC00887-203ENST00000429578 KIAA1107Q9UPP5 1409 aa25.9■■□□□ 1.74
LINC00887-203ENST00000429578 ARHGEF5Q12774 1597 aa25.9■■□□□ 1.74
LINC00887-203ENST00000429578 AKNAQ7Z591 1439 aa25.9■■□□□ 1.74
LINC00887-203ENST00000429578 CROCC2H7BZ55 1655 aa25.89■■□□□ 1.74
LINC00887-203ENST00000429578 ADGRL1O94910 1474 aa25.88■■□□□ 1.73
LINC00887-203ENST00000429578 MBD5Q9P267 1494 aa25.88■■□□□ 1.73
LINC00887-203ENST00000429578 PCGF6Q9BYE7 350 aa25.86■■□□□ 1.73
LINC00887-203ENST00000429578 ARHGEF12Q9NZN5 1544 aa25.86■■□□□ 1.73
LINC00887-203ENST00000429578 DAPK1P53355 1430 aa25.85■■□□□ 1.73
LINC00887-203ENST00000429578 HNRNPMP52272 730 aaKnown RBP eCLIP25.84■■□□□ 1.73
LINC00887-203ENST00000429578 ABCC5O15440 1437 aa25.83■■□□□ 1.73
LINC00887-203ENST00000429578 ITGAEP38570 1179 aa25.83■■□□□ 1.72
LINC00887-203ENST00000429578 RSPH4AQ5TD94 716 aa25.83■■□□□ 1.72
LINC00887-203ENST00000429578 CCDC141Q6ZP82 1450 aa25.82■■□□□ 1.72
LINC00887-203ENST00000429578 SCAPERQ9BY12 1400 aa25.81■■□□□ 1.72
LINC00887-203ENST00000429578 PTPRKQ15262 1439 aa25.79■■□□□ 1.72
LINC00887-203ENST00000429578 ADGBQ8N7X0 1667 aa25.79■■□□□ 1.72
LINC00887-203ENST00000429578 SHANK2Q9UPX8 1470 aa25.77■■□□□ 1.72
LINC00887-203ENST00000429578 TRAPPC8Q9Y2L5 1435 aa25.77■■□□□ 1.72
LINC00887-203ENST00000429578 RICTORQ6R327 1708 aa25.77■■□□□ 1.72
LINC00887-203ENST00000429578 RAPGEF3O95398 923 aa25.76■■□□□ 1.71
LINC00887-203ENST00000429578 MAST1Q9Y2H9 1570 aa25.75■■□□□ 1.71
LINC00887-203ENST00000429578 ZNF518AQ6AHZ1 1483 aa25.74■■□□□ 1.71
LINC00887-203ENST00000429578 DENND4BO75064 1496 aaPredicted RBP25.74■■□□□ 1.71
LINC00887-203ENST00000429578 POGZQ7Z3K3 1410 aa25.73■■□□□ 1.71
LINC00887-203ENST00000429578 TSPY4P0CV99 314 aa25.73■■□□□ 1.71
LINC00887-203ENST00000429578 TSPY10P0CW01 314 aa25.73■■□□□ 1.71
LINC00887-203ENST00000429578 KDM5CP41229 1560 aa25.72■■□□□ 1.71
LINC00887-203ENST00000429578 C9orf84Q5VXU9 1444 aa25.71■■□□□ 1.71
LINC00887-203ENST00000429578 AFAP1Q8N556 730 aa25.7■■□□□ 1.7
LINC00887-203ENST00000429578 ADGRL2O95490 1459 aa25.69■■□□□ 1.7
LINC00887-203ENST00000429578 CHIC2Q9UKJ5 165 aa25.68■■□□□ 1.7
LINC00887-203ENST00000429578 ROCK1Q13464 1354 aa25.68■■□□□ 1.7
LINC00887-203ENST00000429578 FRMPD1Q5SYB0 1578 aa25.68■■□□□ 1.7
LINC00887-203ENST00000429578 INO80Q9ULG1 1556 aaPredicted RBP25.68■■□□□ 1.7
LINC00887-203ENST00000429578 GCC2Q8IWJ2 1684 aa25.67■■□□□ 1.7
LINC00887-203ENST00000429578 ZFYVE16Q7Z3T8 1539 aa25.66■■□□□ 1.7
LINC00887-203ENST00000429578 PLXNC1O60486 1568 aa25.66■■□□□ 1.7
LINC00887-203ENST00000429578 KIDINS220Q9ULH0 1771 aa25.65■■□□□ 1.7
LINC00887-203ENST00000429578 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
LINC00887-203ENST00000429578 RTEL1-TNFRSF6BF6WH68 1400 aa25.65■■□□□ 1.7
LINC00887-203ENST00000429578 NCOA1Q15788 1441 aa25.65■■□□□ 1.7
LINC00887-203ENST00000429578 ATP7AQ04656 1500 aa25.65■■□□□ 1.7
LINC00887-203ENST00000429578 SPAG9O60271 1321 aaKnown RBP25.64■■□□□ 1.7
LINC00887-203ENST00000429578 ANKRD30AQ9BXX3 1397 aa25.63■■□□□ 1.69
LINC00887-203ENST00000429578 HFM1A2PYH4 1435 aa25.63■■□□□ 1.69
LINC00887-203ENST00000429578 ZMYM4Q5VZL5 1548 aa25.62■■□□□ 1.69
LINC00887-203ENST00000429578 MLH3Q9UHC1 1453 aa25.62■■□□□ 1.69
LINC00887-203ENST00000429578 NAIPQ13075 1403 aa25.59■■□□□ 1.69
LINC00887-203ENST00000429578 RRP7BPQ9NSQ0 103 aa25.59■■□□□ 1.69
LINC00887-203ENST00000429578 SETD5Q9C0A6 1442 aa25.57■■□□□ 1.68
LINC00887-203ENST00000429578 KIF15Q9NS87 1388 aa25.54■■□□□ 1.68
LINC00887-203ENST00000429578 MAGI2Q86UL8 1455 aa25.54■■□□□ 1.68
LINC00887-203ENST00000429578 MYT1LQ9UL68 1186 aa25.54■■□□□ 1.68
LINC00887-203ENST00000429578 ABCA6Q8N139 1617 aa25.53■■□□□ 1.68
LINC00887-203ENST00000429578 ARHGEF40Q8TER5 1519 aa25.53■■□□□ 1.68
LINC00887-203ENST00000429578 ARID4BQ4LE39 1312 aaPredicted RBP25.53■■□□□ 1.68
LINC00887-203ENST00000429578 DUOX2Q9NRD8 1548 aa25.52■■□□□ 1.68
LINC00887-203ENST00000429578 DIP2CQ9Y2E4 1556 aa25.5■■□□□ 1.67
LINC00887-203ENST00000429578 RAB3GAP2Q9H2M9 1393 aa25.5■■□□□ 1.67
LINC00887-203ENST00000429578 ANKRD50Q9ULJ7 1429 aa25.48■■□□□ 1.67
LINC00887-203ENST00000429578 ADAMTSL3P82987 1691 aa25.47■■□□□ 1.67
LINC00887-203ENST00000429578 YEATS2Q9ULM3 1422 aa25.46■■□□□ 1.67
LINC00887-203ENST00000429578 BCORL1Q5H9F3 1711 aa25.45■■□□□ 1.67
LINC00887-203ENST00000429578 ERBINQ96RT1 1412 aa25.45■■□□□ 1.66
LINC00887-203ENST00000429578 HRCP23327 699 aa25.44■■□□□ 1.66
LINC00887-203ENST00000429578 EIF2AK4Q9P2K8 1649 aaKnown RBP25.43■■□□□ 1.66
LINC00887-203ENST00000429578 A2MP01023 1474 aa25.43■■□□□ 1.66
LINC00887-203ENST00000429578 DHX29Q7Z478 1369 aaKnown RBP25.41■■□□□ 1.66
LINC00887-203ENST00000429578 PTPRMP28827 1452 aa25.41■■□□□ 1.66
LINC00887-203ENST00000429578 REREQ9P2R6 1566 aa25.4■■□□□ 1.66
LINC00887-203ENST00000429578 ATP10AO60312 1499 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms