RNA–Protein interactions for RNA: ENST00000428946.5

LRRC23-204, Transcript of leucine rich repeat containing 23, humanhuman

TSL 3

Gene LRRC23, Length 969 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-204ENST00000428946 MADDQ8WXG6 1647 aa29.6■■■□□ 2.33
LRRC23-204ENST00000428946 SCAPERQ9BY12 1400 aa29.59■■■□□ 2.33
LRRC23-204ENST00000428946 POGZQ7Z3K3 1410 aa29.58■■■□□ 2.33
LRRC23-204ENST00000428946 SIGLEC1Q9BZZ2 1709 aa29.58■■■□□ 2.33
LRRC23-204ENST00000428946 YEATS2Q9ULM3 1422 aa29.58■■■□□ 2.33
LRRC23-204ENST00000428946 CCDC18Q5T9S5 1454 aa29.57■■■□□ 2.32
LRRC23-204ENST00000428946 ARHGAP5Q13017 1502 aa29.56■■■□□ 2.32
LRRC23-204ENST00000428946 PTPRMP28827 1452 aa29.55■■■□□ 2.32
LRRC23-204ENST00000428946 FYCO1Q9BQS8 1478 aa29.54■■■□□ 2.32
LRRC23-204ENST00000428946 CDC42BPBQ9Y5S2 1711 aa29.53■■■□□ 2.32
LRRC23-204ENST00000428946 EFCAB2Q5VUJ9 269 aa29.52■■■□□ 2.32
LRRC23-204ENST00000428946 RIMS1Q86UR5 1692 aaKnown RBP29.51■■■□□ 2.31
LRRC23-204ENST00000428946 LOC105371045A0A1W2PR82 267 aa29.5■■■□□ 2.31
LRRC23-204ENST00000428946 PREX2Q70Z35 1606 aa29.49■■■□□ 2.31
LRRC23-204ENST00000428946 MAGI2Q86UL8 1455 aa29.48■■■□□ 2.31
LRRC23-204ENST00000428946 CDC42BPAQ5VT25 1732 aa29.44■■■□□ 2.3
LRRC23-204ENST00000428946 ZNF518AQ6AHZ1 1483 aa29.41■■■□□ 2.3
LRRC23-204ENST00000428946 KDM5CP41229 1560 aa29.4■■■□□ 2.3
LRRC23-204ENST00000428946 MLECQ14165 292 aa29.38■■■□□ 2.29
LRRC23-204ENST00000428946 ABCC1P33527 1531 aa29.38■■■□□ 2.29
LRRC23-204ENST00000428946 FER1L4A9Z1Z3 1794 aa29.38■■■□□ 2.29
LRRC23-204ENST00000428946 ITSN2Q9NZM3 1697 aa29.37■■■□□ 2.29
LRRC23-204ENST00000428946 AFAP1Q8N556 730 aa29.37■■■□□ 2.29
LRRC23-204ENST00000428946 C9orf84Q5VXU9 1444 aa29.37■■■□□ 2.29
LRRC23-204ENST00000428946 ATP10AO60312 1499 aa29.36■■■□□ 2.29
LRRC23-204ENST00000428946 PLPPR3Q6T4P5 718 aa29.35■■■□□ 2.29
LRRC23-204ENST00000428946 ARHGEF12Q9NZN5 1544 aa29.35■■■□□ 2.29
LRRC23-204ENST00000428946 CEP162Q5TB80 1403 aa29.34■■■□□ 2.29
LRRC23-204ENST00000428946 DIP2CQ9Y2E4 1556 aa29.32■■■□□ 2.28
LRRC23-204ENST00000428946 MYT1LQ9UL68 1186 aa29.32■■■□□ 2.28
LRRC23-204ENST00000428946 ABCA6Q8N139 1617 aa29.31■■■□□ 2.28
LRRC23-204ENST00000428946 TRAPPC8Q9Y2L5 1435 aa29.31■■■□□ 2.28
LRRC23-204ENST00000428946 SAMD9LQ8IVG5 1584 aa29.28■■■□□ 2.28
LRRC23-204ENST00000428946 LMTK3Q96Q04 1460 aa29.26■■■□□ 2.27
LRRC23-204ENST00000428946 GPATCH8Q9UKJ3 1502 aaKnown RBP29.25■■■□□ 2.27
LRRC23-204ENST00000428946 ZNF777Q9ULD5 760 aaPredicted RBP29.25■■■□□ 2.27
LRRC23-204ENST00000428946 MLH3Q9UHC1 1453 aa29.23■■■□□ 2.27
LRRC23-204ENST00000428946 SYCP2Q9BX26 1530 aa29.23■■■□□ 2.27
LRRC23-204ENST00000428946 KIDINS220Q9ULH0 1771 aa29.22■■■□□ 2.27
LRRC23-204ENST00000428946 MTUS2Q5JR59 1369 aa29.22■■■□□ 2.27
LRRC23-204ENST00000428946 REREQ9P2R6 1566 aa29.19■■■□□ 2.26
LRRC23-204ENST00000428946 EHBP1L1Q8N3D4 1523 aa29.18■■■□□ 2.26
LRRC23-204ENST00000428946 CCNB3Q8WWL7 1395 aa29.16■■■□□ 2.26
LRRC23-204ENST00000428946 TIAM1Q13009 1591 aa29.15■■■□□ 2.26
LRRC23-204ENST00000428946 ILDR1Q86SU0 546 aaPredicted RBP29.15■■■□□ 2.26
LRRC23-204ENST00000428946 HNRNPMP52272 730 aaKnown RBP eCLIP29.12■■■□□ 2.25
LRRC23-204ENST00000428946 CFDP1Q9UEE9 299 aaPredicted RBP29.12■■■□□ 2.25
LRRC23-204ENST00000428946 HSPA2P54652 639 aa29.11■■■□□ 2.25
LRRC23-204ENST00000428946 CEBPAP49715 358 aaPredicted RBP29.09■■■□□ 2.25
LRRC23-204ENST00000428946 AGLP35573 1532 aa29.09■■■□□ 2.25
LRRC23-204ENST00000428946 PREX1Q8TCU6 1659 aa29.06■■■□□ 2.24
LRRC23-204ENST00000428946 INO80Q9ULG1 1556 aaPredicted RBP29.06■■■□□ 2.24
LRRC23-204ENST00000428946 ATP7AQ04656 1500 aa29.06■■■□□ 2.24
LRRC23-204ENST00000428946 PLEKHH2Q8IVE3 1493 aa29.06■■■□□ 2.24
LRRC23-204ENST00000428946 KIAA1107Q9UPP5 1409 aa29.05■■■□□ 2.24
LRRC23-204ENST00000428946 SPAG9O60271 1321 aaKnown RBP29.05■■■□□ 2.24
LRRC23-204ENST00000428946 SUPT6HQ7KZ85 1726 aaKnown RBP29.05■■■□□ 2.24
LRRC23-204ENST00000428946 C3P01024 1663 aa29.04■■■□□ 2.24
LRRC23-204ENST00000428946 ZNF644Q9H582 1327 aaPredicted RBP29.02■■■□□ 2.24
LRRC23-204ENST00000428946 NCOA2Q15596 1464 aa28.98■■■□□ 2.23
LRRC23-204ENST00000428946 VPS8Q8N3P4 1428 aa28.98■■■□□ 2.23
LRRC23-204ENST00000428946 PLXNC1O60486 1568 aa28.95■■■□□ 2.22
LRRC23-204ENST00000428946 ESF1Q9H501 851 aaKnown RBP28.94■■■□□ 2.22
LRRC23-204ENST00000428946 MBD5Q9P267 1494 aa28.93■■■□□ 2.22
LRRC23-204ENST00000428946 A2MP01023 1474 aa28.92■■■□□ 2.22
LRRC23-204ENST00000428946 ADGBQ8N7X0 1667 aa28.91■■■□□ 2.22
LRRC23-204ENST00000428946 UHRF1BP1Q6BDS2 1440 aa28.9■■■□□ 2.22
LRRC23-204ENST00000428946 CAMSAP2Q08AD1 1489 aa28.9■■■□□ 2.22
LRRC23-204ENST00000428946 SETD1BQ9UPS6 1966 aaKnown RBP28.9■■■□□ 2.22
LRRC23-204ENST00000428946 CLTCQ00610 1675 aaKnown RBP28.88■■■□□ 2.21
LRRC23-204ENST00000428946 CNTLNQ9NXG0 1405 aa28.87■■■□□ 2.21
LRRC23-204ENST00000428946 MROH2AA6NES4 1674 aa28.87■■■□□ 2.21
LRRC23-204ENST00000428946 LRRC9Q6ZRR7 1453 aa28.87■■■□□ 2.21
LRRC23-204ENST00000428946 CCDC141Q6ZP82 1450 aa28.83■■■□□ 2.21
LRRC23-204ENST00000428946 STRCQ7RTU9 1775 aa28.83■■■□□ 2.21
LRRC23-204ENST00000428946 KANK4Q5T7N3 995 aaPredicted RBP28.79■■■□□ 2.2
LRRC23-204ENST00000428946 RTEL1-TNFRSF6BF6WH68 1400 aa28.78■■■□□ 2.2
LRRC23-204ENST00000428946 GGT6Q6P531 493 aa28.78■■■□□ 2.2
LRRC23-204ENST00000428946 ZMYM3Q14202 1370 aa28.76■■■□□ 2.2
LRRC23-204ENST00000428946 MAP3K1Q13233 1512 aa28.75■■■□□ 2.19
LRRC23-204ENST00000428946 FBXO41Q8TF61 875 aa28.75■■■□□ 2.19
LRRC23-204ENST00000428946 ARHGEF5Q12774 1597 aa28.75■■■□□ 2.19
LRRC23-204ENST00000428946 NPATQ14207 1427 aa28.71■■■□□ 2.19
LRRC23-204ENST00000428946 DHX29Q7Z478 1369 aaKnown RBP28.71■■■□□ 2.19
LRRC23-204ENST00000428946 MYO3AQ8NEV4 1616 aa28.7■■■□□ 2.19
LRRC23-204ENST00000428946 APLP2Q06481 763 aa28.69■■■□□ 2.18
LRRC23-204ENST00000428946 PTPRKQ15262 1439 aa28.66■■■□□ 2.18
LRRC23-204ENST00000428946 MYOM3Q5VTT5 1437 aa28.66■■■□□ 2.18
LRRC23-204ENST00000428946 RSPH4AQ5TD94 716 aa28.65■■■□□ 2.18
LRRC23-204ENST00000428946 KIF3BO15066 747 aa28.64■■■□□ 2.18
LRRC23-204ENST00000428946 ZNF142P52746 1687 aaPredicted RBP28.64■■■□□ 2.17
LRRC23-204ENST00000428946 CAMSAP1Q5T5Y3 1602 aa28.63■■■□□ 2.17
LRRC23-204ENST00000428946 NCOA1Q15788 1441 aa28.61■■■□□ 2.17
LRRC23-204ENST00000428946 MAST1Q9Y2H9 1570 aa28.61■■■□□ 2.17
LRRC23-204ENST00000428946 CEP170BQ9Y4F5 1589 aaPredicted RBP28.6■■■□□ 2.17
LRRC23-204ENST00000428946 TSPY4P0CV99 314 aa28.6■■■□□ 2.17
LRRC23-204ENST00000428946 TSPY10P0CW01 314 aa28.6■■■□□ 2.17
LRRC23-204ENST00000428946 CERKQ8TCT0 537 aa28.6■■■□□ 2.17
LRRC23-204ENST00000428946 MIA2Q96PC5 1412 aa28.6■■■□□ 2.17
LRRC23-204ENST00000428946 KDM5DQ9BY66 1539 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms