RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 ARHGAP5Q13017 1502 aa34.92■■■■□ 3.18
PTPN18-205ENST00000428843 GPATCH8Q9UKJ3 1502 aaKnown RBP34.91■■■■□ 3.18
PTPN18-205ENST00000428843 PHLDB1Q86UU1 1377 aa34.91■■■■□ 3.18
PTPN18-205ENST00000428843 CCNB3Q8WWL7 1395 aa34.91■■■■□ 3.18
PTPN18-205ENST00000428843 COL17A1Q9UMD9 1497 aaPredicted RBP34.9■■■■□ 3.18
PTPN18-205ENST00000428843 AKNAQ7Z591 1439 aa34.89■■■■□ 3.18
PTPN18-205ENST00000428843 EFCAB2Q5VUJ9 269 aa34.88■■■■□ 3.17
PTPN18-205ENST00000428843 ITSN2Q9NZM3 1697 aa34.84■■■■□ 3.17
PTPN18-205ENST00000428843 ADGRL1O94910 1474 aa34.78■■■■□ 3.16
PTPN18-205ENST00000428843 CFDP1Q9UEE9 299 aaPredicted RBP34.78■■■■□ 3.16
PTPN18-205ENST00000428843 SAMD9LQ8IVG5 1584 aa34.74■■■■□ 3.15
PTPN18-205ENST00000428843 SCAPERQ9BY12 1400 aa34.73■■■■□ 3.15
PTPN18-205ENST00000428843 DENND4BO75064 1496 aaPredicted RBP34.73■■■■□ 3.15
PTPN18-205ENST00000428843 ZNF777Q9ULD5 760 aaPredicted RBP34.73■■■■□ 3.15
PTPN18-205ENST00000428843 RAPGEF3O95398 923 aa34.71■■■■□ 3.15
PTPN18-205ENST00000428843 ABCC1P33527 1531 aa34.71■■■■□ 3.15
PTPN18-205ENST00000428843 FRMPD1Q5SYB0 1578 aa34.7■■■■□ 3.15
PTPN18-205ENST00000428843 RICTORQ6R327 1708 aa34.7■■■■□ 3.15
PTPN18-205ENST00000428843 MYOM3Q5VTT5 1437 aa34.68■■■■□ 3.14
PTPN18-205ENST00000428843 PPARGC1BQ86YN6 1023 aaKnown RBP34.67■■■■□ 3.14
PTPN18-205ENST00000428843 ARHGEF12Q9NZN5 1544 aa34.65■■■■□ 3.14
PTPN18-205ENST00000428843 POGZQ7Z3K3 1410 aa34.64■■■■□ 3.14
PTPN18-205ENST00000428843 ZNF644Q9H582 1327 aaPredicted RBP34.63■■■■□ 3.13
PTPN18-205ENST00000428843 PLEKHH2Q8IVE3 1493 aa34.62■■■■□ 3.13
PTPN18-205ENST00000428843 SYCP2Q9BX26 1530 aa34.61■■■■□ 3.13
PTPN18-205ENST00000428843 MIA2Q96PC5 1412 aa34.6■■■■□ 3.13
PTPN18-205ENST00000428843 KIAA1107Q9UPP5 1409 aa34.59■■■■□ 3.13
PTPN18-205ENST00000428843 CAMSAP2Q08AD1 1489 aa34.58■■■■□ 3.13
PTPN18-205ENST00000428843 ZNF518AQ6AHZ1 1483 aa34.58■■■■□ 3.13
PTPN18-205ENST00000428843 TRAPPC8Q9Y2L5 1435 aa34.57■■■■□ 3.13
PTPN18-205ENST00000428843 HNRNPMP52272 730 aaKnown RBP eCLIP34.57■■■■□ 3.122e-8■■■■■ 35.4
PTPN18-205ENST00000428843 AFAP1Q8N556 730 aa34.55■■■■□ 3.12
PTPN18-205ENST00000428843 ZMYM4Q5VZL5 1548 aa34.55■■■■□ 3.12
PTPN18-205ENST00000428843 KDM5CP41229 1560 aa34.53■■■■□ 3.12
PTPN18-205ENST00000428843 FGD6Q6ZV73 1430 aa34.52■■■■□ 3.12
PTPN18-205ENST00000428843 PTPN23Q9H3S7 1636 aa34.5■■■■□ 3.11
PTPN18-205ENST00000428843 MBD5Q9P267 1494 aa34.5■■■■□ 3.11
PTPN18-205ENST00000428843 MAGI2Q86UL8 1455 aa34.46■■■■□ 3.11
PTPN18-205ENST00000428843 HECW2Q9P2P5 1572 aa34.44■■■■□ 3.1
PTPN18-205ENST00000428843 TCOF1Q13428 1488 aaKnown RBP34.43■■■■□ 3.1
PTPN18-205ENST00000428843 ZFYVE16Q7Z3T8 1539 aa34.43■■■■□ 3.1
PTPN18-205ENST00000428843 ARHGEF40Q8TER5 1519 aa34.42■■■■□ 3.1
PTPN18-205ENST00000428843 ARHGEF5Q12774 1597 aa34.41■■■■□ 3.1
PTPN18-205ENST00000428843 YEATS2Q9ULM3 1422 aa34.41■■■■□ 3.1
PTPN18-205ENST00000428843 MLH3Q9UHC1 1453 aa34.4■■■■□ 3.1
PTPN18-205ENST00000428843 CCDC141Q6ZP82 1450 aa34.39■■■■□ 3.1
PTPN18-205ENST00000428843 MYT1LQ9UL68 1186 aa34.39■■■■□ 3.1
PTPN18-205ENST00000428843 SPAG9O60271 1321 aaKnown RBP34.37■■■■□ 3.09
PTPN18-205ENST00000428843 RSPH4AQ5TD94 716 aa34.37■■■■□ 3.09
PTPN18-205ENST00000428843 KIDINS220Q9ULH0 1771 aa34.36■■■■□ 3.09
PTPN18-205ENST00000428843 INO80Q9ULG1 1556 aaPredicted RBP34.33■■■■□ 3.09
PTPN18-205ENST00000428843 ATP7AQ04656 1500 aa34.32■■■■□ 3.08
PTPN18-205ENST00000428843 ABCA6Q8N139 1617 aa34.31■■■■□ 3.08
PTPN18-205ENST00000428843 FAM50AQ14320 339 aaKnown RBP34.31■■■■□ 3.08
PTPN18-205ENST00000428843 DIP2CQ9Y2E4 1556 aa34.3■■■■□ 3.08
PTPN18-205ENST00000428843 ATP10AO60312 1499 aa34.28■■■■□ 3.08
PTPN18-205ENST00000428843 DNMT1P26358 1616 aaKnown RBP34.28■■■■□ 3.08
PTPN18-205ENST00000428843 TSPY4P0CV99 314 aa34.26■■■■□ 3.08
PTPN18-205ENST00000428843 TSPY10P0CW01 314 aa34.26■■■■□ 3.08
PTPN18-205ENST00000428843 RTEL1-TNFRSF6BF6WH68 1400 aa34.26■■■■□ 3.07
PTPN18-205ENST00000428843 CROCC2H7BZ55 1655 aa34.25■■■■□ 3.07
PTPN18-205ENST00000428843 ABCC5O15440 1437 aa34.25■■■■□ 3.07
PTPN18-205ENST00000428843 DAPK1P53355 1430 aa34.24■■■■□ 3.07
PTPN18-205ENST00000428843 C9orf84Q5VXU9 1444 aa34.23■■■■□ 3.07
PTPN18-205ENST00000428843 MAST1Q9Y2H9 1570 aa34.23■■■■□ 3.07
PTPN18-205ENST00000428843 RRBP1Q9P2E9 1410 aaKnown RBP34.21■■■■□ 3.07
PTPN18-205ENST00000428843 SIGLEC1Q9BZZ2 1709 aa34.21■■■■□ 3.07
PTPN18-205ENST00000428843 SHANK2Q9UPX8 1470 aa34.18■■■■□ 3.06
PTPN18-205ENST00000428843 REREQ9P2R6 1566 aa34.18■■■■□ 3.06
PTPN18-205ENST00000428843 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.17■■■■□ 3.06
PTPN18-205ENST00000428843 ADGBQ8N7X0 1667 aa34.15■■■■□ 3.06
PTPN18-205ENST00000428843 ARID4BQ4LE39 1312 aaPredicted RBP34.14■■■■□ 3.06
PTPN18-205ENST00000428843 A2MP01023 1474 aa34.11■■■■□ 3.05
PTPN18-205ENST00000428843 PLXNC1O60486 1568 aa34.1■■■■□ 3.05
PTPN18-205ENST00000428843 CHIC2Q9UKJ5 165 aa34.08■■■■□ 3.05
PTPN18-205ENST00000428843 AGLP35573 1532 aa34.06■■■■□ 3.04
PTPN18-205ENST00000428843 BCORL1Q5H9F3 1711 aa34.06■■■■□ 3.04
PTPN18-205ENST00000428843 PTPRKQ15262 1439 aa34.05■■■■□ 3.04
PTPN18-205ENST00000428843 DHX29Q7Z478 1369 aaKnown RBP34.04■■■■□ 3.04
PTPN18-205ENST00000428843 ITGAEP38570 1179 aa34.03■■■■□ 3.04
PTPN18-205ENST00000428843 ADGRL2O95490 1459 aa34.01■■■■□ 3.04
PTPN18-205ENST00000428843 KDM4FA0A1W2PPD8 638 aa34.01■■■■□ 3.03
PTPN18-205ENST00000428843 ANKRD30AQ9BXX3 1397 aa34■■■■□ 3.03
PTPN18-205ENST00000428843 RRP7BPQ9NSQ0 103 aa33.99■■■■□ 3.03
PTPN18-205ENST00000428843 KIF15Q9NS87 1388 aa33.98■■■■□ 3.03
PTPN18-205ENST00000428843 NCOA1Q15788 1441 aa33.98■■■■□ 3.03
PTPN18-205ENST00000428843 MLECQ14165 292 aa33.98■■■■□ 3.03
PTPN18-205ENST00000428843 ADAMTSL3P82987 1691 aa33.98■■■■□ 3.03
PTPN18-205ENST00000428843 DUOX2Q9NRD8 1548 aa33.96■■■■□ 3.03
PTPN18-205ENST00000428843 ROCK1Q13464 1354 aa33.9■■■■□ 3.02
PTPN18-205ENST00000428843 MADDQ8WXG6 1647 aa33.9■■■■□ 3.02
PTPN18-205ENST00000428843 KIF3BO15066 747 aa33.88■■■■□ 3.01
PTPN18-205ENST00000428843 EIF2AK4Q9P2K8 1649 aaKnown RBP33.88■■■■□ 3.01
PTPN18-205ENST00000428843 FER1L4A9Z1Z3 1794 aa33.87■■■■□ 3.01
PTPN18-205ENST00000428843 ERBINQ96RT1 1412 aa33.86■■■■□ 3.01
PTPN18-205ENST00000428843 GGT6Q6P531 493 aa33.83■■■■□ 3.01
PTPN18-205ENST00000428843 RIMS1Q86UR5 1692 aaKnown RBP33.83■■■■□ 3.01
PTPN18-205ENST00000428843 RNF17Q9BXT8 1623 aaKnown RBP33.79■■■■□ 3
PTPN18-205ENST00000428843 ANKRD50Q9ULJ7 1429 aa33.78■■■■□ 3
PTPN18-205ENST00000428843 MROH1Q8NDA8 1641 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms