RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 TCOF1Q13428 1488 aaKnown RBP16.65■□□□□ 0.26
CRIM1-204ENST00000428774 GPATCH8Q9UKJ3 1502 aaKnown RBP16.65■□□□□ 0.26
CRIM1-204ENST00000428774 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
CRIM1-204ENST00000428774 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
CRIM1-204ENST00000428774 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
CRIM1-204ENST00000428774 SAMD9LQ8IVG5 1584 aa16.6■□□□□ 0.25
CRIM1-204ENST00000428774 CROCC2H7BZ55 1655 aa16.59■□□□□ 0.25
CRIM1-204ENST00000428774 CAMSAP2Q08AD1 1489 aa16.59■□□□□ 0.25
CRIM1-204ENST00000428774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.58■□□□□ 0.24
CRIM1-204ENST00000428774 DNMT1P26358 1616 aaKnown RBP16.58■□□□□ 0.24
CRIM1-204ENST00000428774 ARAP3Q8WWN8 1544 aa16.57■□□□□ 0.24
CRIM1-204ENST00000428774 ARHGAP5Q13017 1502 aa16.56■□□□□ 0.24
CRIM1-204ENST00000428774 CD109Q6YHK3 1445 aa16.53■□□□□ 0.24
CRIM1-204ENST00000428774 PLCH2O75038 1416 aa16.52■□□□□ 0.23
CRIM1-204ENST00000428774 ABCC1P33527 1531 aa16.51■□□□□ 0.23
CRIM1-204ENST00000428774 ADGBQ8N7X0 1667 aa16.51■□□□□ 0.23
CRIM1-204ENST00000428774 FAM50AQ14320 339 aaKnown RBP16.51■□□□□ 0.23
CRIM1-204ENST00000428774 SYCP2Q9BX26 1530 aa16.5■□□□□ 0.23
CRIM1-204ENST00000428774 ARHGEF5Q12774 1597 aa16.5■□□□□ 0.23
CRIM1-204ENST00000428774 CFAP74Q9C0B2 1584 aa16.5■□□□□ 0.23
CRIM1-204ENST00000428774 GCC2Q8IWJ2 1684 aa16.49■□□□□ 0.23
CRIM1-204ENST00000428774 DAPK1P53355 1430 aa16.48■□□□□ 0.23
CRIM1-204ENST00000428774 PTPRKQ15262 1439 aa16.48■□□□□ 0.23
CRIM1-204ENST00000428774 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
CRIM1-204ENST00000428774 ZNF644Q9H582 1327 aaPredicted RBP16.47■□□□□ 0.23
CRIM1-204ENST00000428774 FANCAO15360 1455 aa16.45■□□□□ 0.22
CRIM1-204ENST00000428774 ABCC5O15440 1437 aa16.45■□□□□ 0.22
CRIM1-204ENST00000428774 PLEKHH2Q8IVE3 1493 aa16.44■□□□□ 0.22
CRIM1-204ENST00000428774 MBD5Q9P267 1494 aa16.44■□□□□ 0.22
CRIM1-204ENST00000428774 ARHGEF12Q9NZN5 1544 aa16.44■□□□□ 0.22
CRIM1-204ENST00000428774 SHANK2Q9UPX8 1470 aa16.43■□□□□ 0.22
CRIM1-204ENST00000428774 ITGAEP38570 1179 aa16.43■□□□□ 0.22
CRIM1-204ENST00000428774 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
CRIM1-204ENST00000428774 MAST1Q9Y2H9 1570 aa16.43■□□□□ 0.22
CRIM1-204ENST00000428774 TEX14Q8IWB6 1497 aa16.42■□□□□ 0.22
CRIM1-204ENST00000428774 CCDC141Q6ZP82 1450 aa16.42■□□□□ 0.22
CRIM1-204ENST00000428774 COL17A1Q9UMD9 1497 aaPredicted RBP16.42■□□□□ 0.22
CRIM1-204ENST00000428774 KDM6BO15054 1643 aa16.41■□□□□ 0.22
CRIM1-204ENST00000428774 AKNAQ7Z591 1439 aa16.4■□□□□ 0.22
CRIM1-204ENST00000428774 KIAA1107Q9UPP5 1409 aa16.4■□□□□ 0.22
CRIM1-204ENST00000428774 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
CRIM1-204ENST00000428774 ADGRL2O95490 1459 aa16.39■□□□□ 0.21
CRIM1-204ENST00000428774 NEO1Q92859 1461 aa16.39■□□□□ 0.21
CRIM1-204ENST00000428774 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
CRIM1-204ENST00000428774 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
CRIM1-204ENST00000428774 PLXNC1O60486 1568 aa16.37■□□□□ 0.21
CRIM1-204ENST00000428774 INO80Q9ULG1 1556 aaPredicted RBP16.37■□□□□ 0.21
CRIM1-204ENST00000428774 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
CRIM1-204ENST00000428774 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
CRIM1-204ENST00000428774 C9orf84Q5VXU9 1444 aa16.36■□□□□ 0.21
CRIM1-204ENST00000428774 TRAPPC8Q9Y2L5 1435 aa16.35■□□□□ 0.21
CRIM1-204ENST00000428774 ZFYVE16Q7Z3T8 1539 aa16.35■□□□□ 0.21
CRIM1-204ENST00000428774 NAIPQ13075 1403 aa16.34■□□□□ 0.21
CRIM1-204ENST00000428774 KDM5CP41229 1560 aa16.34■□□□□ 0.21
CRIM1-204ENST00000428774 HNRNPMP52272 730 aaKnown RBP eCLIP16.33■□□□□ 0.26e-7■■■□□ 16.3
CRIM1-204ENST00000428774 ROCK1Q13464 1354 aa16.33■□□□□ 0.2
CRIM1-204ENST00000428774 SCAPERQ9BY12 1400 aa16.32■□□□□ 0.2
CRIM1-204ENST00000428774 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
CRIM1-204ENST00000428774 POGZQ7Z3K3 1410 aa16.31■□□□□ 0.2
CRIM1-204ENST00000428774 RAB3GAP2Q9H2M9 1393 aa16.31■□□□□ 0.2
CRIM1-204ENST00000428774 ATP7AQ04656 1500 aa16.3■□□□□ 0.2
CRIM1-204ENST00000428774 CHIC2Q9UKJ5 165 aa16.3■□□□□ 0.2
CRIM1-204ENST00000428774 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
CRIM1-204ENST00000428774 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
CRIM1-204ENST00000428774 RAPGEF3O95398 923 aa16.29■□□□□ 0.2
CRIM1-204ENST00000428774 DENND4BO75064 1496 aaPredicted RBP16.29■□□□□ 0.2
CRIM1-204ENST00000428774 ZNF518AQ6AHZ1 1483 aa16.29■□□□□ 0.2
CRIM1-204ENST00000428774 NCOA1Q15788 1441 aa16.28■□□□□ 0.2
CRIM1-204ENST00000428774 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
CRIM1-204ENST00000428774 ABCA6Q8N139 1617 aa16.26■□□□□ 0.19
CRIM1-204ENST00000428774 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
CRIM1-204ENST00000428774 RSPH4AQ5TD94 716 aa16.25■□□□□ 0.19
CRIM1-204ENST00000428774 ZMYM4Q5VZL5 1548 aa16.24■□□□□ 0.19
CRIM1-204ENST00000428774 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
CRIM1-204ENST00000428774 AFAP1Q8N556 730 aa16.23■□□□□ 0.19
CRIM1-204ENST00000428774 KIF15Q9NS87 1388 aa16.23■□□□□ 0.19
CRIM1-204ENST00000428774 SIGLEC1Q9BZZ2 1709 aa16.22■□□□□ 0.19
CRIM1-204ENST00000428774 DUOX2Q9NRD8 1548 aa16.22■□□□□ 0.19
CRIM1-204ENST00000428774 UNC13BO14795 1591 aa16.21■□□□□ 0.19
CRIM1-204ENST00000428774 DIP2CQ9Y2E4 1556 aa16.21■□□□□ 0.19
CRIM1-204ENST00000428774 TSPY4P0CV99 314 aa16.21■□□□□ 0.19
CRIM1-204ENST00000428774 TSPY10P0CW01 314 aa16.21■□□□□ 0.19
CRIM1-204ENST00000428774 YEATS2Q9ULM3 1422 aa16.2■□□□□ 0.18
CRIM1-204ENST00000428774 ARHGEF40Q8TER5 1519 aa16.2■□□□□ 0.18
CRIM1-204ENST00000428774 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
CRIM1-204ENST00000428774 EIF2AK4Q9P2K8 1649 aaKnown RBP16.19■□□□□ 0.18
CRIM1-204ENST00000428774 ANKRD50Q9ULJ7 1429 aa16.19■□□□□ 0.18
CRIM1-204ENST00000428774 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
CRIM1-204ENST00000428774 DHX57Q6P158 1386 aaKnown RBP16.18■□□□□ 0.18
CRIM1-204ENST00000428774 ERBINQ96RT1 1412 aa16.17■□□□□ 0.18
CRIM1-204ENST00000428774 DEPDC5O75140 1603 aa16.16■□□□□ 0.18
CRIM1-204ENST00000428774 KDM5DQ9BY66 1539 aa16.16■□□□□ 0.18
CRIM1-204ENST00000428774 BCORL1Q5H9F3 1711 aa16.16■□□□□ 0.18
CRIM1-204ENST00000428774 HRCP23327 699 aa16.15■□□□□ 0.18
CRIM1-204ENST00000428774 MAGI2Q86UL8 1455 aa16.15■□□□□ 0.18
CRIM1-204ENST00000428774 IQGAP3Q86VI3 1631 aa16.12■□□□□ 0.17
CRIM1-204ENST00000428774 MROH1Q8NDA8 1641 aa16.12■□□□□ 0.17
CRIM1-204ENST00000428774 RNF17Q9BXT8 1623 aaKnown RBP16.12■□□□□ 0.17
CRIM1-204ENST00000428774 PZPP20742 1482 aa16.11■□□□□ 0.17
CRIM1-204ENST00000428774 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms