RNA–Protein interactions for RNA: ENST00000428744.1

KIF3A-204, Transcript of kinesin family member 3A, humanhuman

TSL 5

Gene KIF3A, Length 658 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-204ENST00000428744 POTEB3A0JP26 581 aa9.82□□□□□ -0.84
KIF3A-204ENST00000428744 POTEBQ6S5H4 581 aa9.82□□□□□ -0.84
KIF3A-204ENST00000428744 HS6ST3Q8IZP7 471 aa9.82□□□□□ -0.84
KIF3A-204ENST00000428744 HOXB1P14653 301 aaPredicted RBP9.81□□□□□ -0.84
KIF3A-204ENST00000428744 DOK7Q18PE1 504 aa9.81□□□□□ -0.84
KIF3A-204ENST00000428744 PPP1R37O75864 691 aa9.8□□□□□ -0.84
KIF3A-204ENST00000428744 EMP3P54852 163 aa9.8□□□□□ -0.84
KIF3A-204ENST00000428744 KIF3CO14782 793 aa9.79□□□□□ -0.84
KIF3A-204ENST00000428744 ZNF710Q8N1W2 664 aa9.77□□□□□ -0.85
KIF3A-204ENST00000428744 HS3ST6Q96QI5 342 aa9.77□□□□□ -0.85
KIF3A-204ENST00000428744 DNAJC5Q9H3Z4 198 aa9.77□□□□□ -0.85
KIF3A-204ENST00000428744 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
KIF3A-204ENST00000428744 CHGAP10645 457 aaKnown RBP9.75□□□□□ -0.85
KIF3A-204ENST00000428744 GPR153Q6NV75 609 aa9.75□□□□□ -0.85
KIF3A-204ENST00000428744 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
KIF3A-204ENST00000428744 C2orf72A6NCS6 295 aa9.74□□□□□ -0.85
KIF3A-204ENST00000428744 RIMBP2O15034 1052 aa9.73□□□□□ -0.85
KIF3A-204ENST00000428744 NKX1-1Q15270 411 aaPredicted RBP9.73□□□□□ -0.85
KIF3A-204ENST00000428744 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
KIF3A-204ENST00000428744 KRTAP3-2Q9BYR7 98 aa9.7□□□□□ -0.86
KIF3A-204ENST00000428744 ERBB3P21860 1342 aa9.67□□□□□ -0.86
KIF3A-204ENST00000428744 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
KIF3A-204ENST00000428744 SLC34A2O95436 690 aa9.65□□□□□ -0.86
KIF3A-204ENST00000428744 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
KIF3A-204ENST00000428744 KHSRPQ92945 711 aaKnown RBP eCLIP9.64□□□□□ -0.87
KIF3A-204ENST00000428744 DCAF8L2P0C7V8 631 aa9.63□□□□□ -0.87
KIF3A-204ENST00000428744 VARS2Q5ST30 1063 aaKnown RBP9.63□□□□□ -0.87
KIF3A-204ENST00000428744 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
KIF3A-204ENST00000428744 FOXK1P85037 733 aa9.6□□□□□ -0.87
KIF3A-204ENST00000428744 ZNF687Q8N1G0 1237 aa9.6□□□□□ -0.87
KIF3A-204ENST00000428744 BBXQ8WY36 941 aaPredicted RBP9.6□□□□□ -0.87
KIF3A-204ENST00000428744 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
KIF3A-204ENST00000428744 RYDENQ9NUL5 291 aaKnown RBP9.59□□□□□ -0.87
KIF3A-204ENST00000428744 ZNF316A6NFI3 1004 aaPredicted RBP9.58□□□□□ -0.88
KIF3A-204ENST00000428744 PCDHGA4Q9Y5G9 962 aa9.58□□□□□ -0.88
KIF3A-204ENST00000428744 NUDT7P0C024 238 aa9.56□□□□□ -0.88
KIF3A-204ENST00000428744 KDM4FA0A1W2PPD8 638 aa9.55□□□□□ -0.88
KIF3A-204ENST00000428744 DSG2Q14126 1118 aa9.55□□□□□ -0.88
KIF3A-204ENST00000428744 PLPP6Q8IY26 295 aa9.55□□□□□ -0.88
KIF3A-204ENST00000428744 PTCD2Q8WV60 388 aaKnown RBP9.55□□□□□ -0.88
KIF3A-204ENST00000428744 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.55□□□□□ -0.88
KIF3A-204ENST00000428744 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
KIF3A-204ENST00000428744 LHX6Q9UPM6 363 aa9.52□□□□□ -0.89
KIF3A-204ENST00000428744 NCKAP5LQ9HCH0 1330 aa9.5□□□□□ -0.89
KIF3A-204ENST00000428744 POTEEQ6S8J3 1075 aa9.48□□□□□ -0.89
KIF3A-204ENST00000428744 PDE4AP27815 886 aa9.46□□□□□ -0.9
KIF3A-204ENST00000428744 RNF166Q96A37 237 aaPredicted RBP9.45□□□□□ -0.9
KIF3A-204ENST00000428744 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
KIF3A-204ENST00000428744 OXER1Q8TDS5 423 aa9.44□□□□□ -0.9
KIF3A-204ENST00000428744 TBC1D12O60347 775 aa9.43□□□□□ -0.9
KIF3A-204ENST00000428744 PPP1R15BQ5SWA1 713 aa9.43□□□□□ -0.9
KIF3A-204ENST00000428744 PSDA5PKW4 1024 aaPredicted RBP9.41□□□□□ -0.9
KIF3A-204ENST00000428744 PBX2P40425 430 aa9.41□□□□□ -0.9
KIF3A-204ENST00000428744 LSM11P83369 360 aaKnown RBP eCLIP9.41□□□□□ -0.9
KIF3A-204ENST00000428744 PLCB2Q00722 1185 aa9.41□□□□□ -0.9
KIF3A-204ENST00000428744 PTGER2P43116 358 aa9.4□□□□□ -0.9
KIF3A-204ENST00000428744 MFSD10Q14728 455 aa9.4□□□□□ -0.9
KIF3A-204ENST00000428744 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.9
KIF3A-204ENST00000428744 CADPS2Q86UW7 1296 aa9.4□□□□□ -0.9
KIF3A-204ENST00000428744 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
KIF3A-204ENST00000428744 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.9
KIF3A-204ENST00000428744 UPF1Q92900 1129 aaKnown RBP eCLIP9.38□□□□□ -0.91
KIF3A-204ENST00000428744 DDX27Q96GQ7 796 aaKnown RBP9.37□□□□□ -0.91
KIF3A-204ENST00000428744 MYT1LQ9UL68 1186 aa9.37□□□□□ -0.91
KIF3A-204ENST00000428744 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
KIF3A-204ENST00000428744 ANO8Q9HCE9 1232 aaPredicted RBP9.36□□□□□ -0.91
KIF3A-204ENST00000428744 PAXIP1Q6ZW49 1069 aaPredicted RBP9.35□□□□□ -0.91
KIF3A-204ENST00000428744 PPP4R3BQ5MIZ7 849 aa9.33□□□□□ -0.92
KIF3A-204ENST00000428744 EMILIN3Q9NT22 766 aa9.32□□□□□ -0.92
KIF3A-204ENST00000428744 PSEN2P49810 448 aa9.31□□□□□ -0.92
KIF3A-204ENST00000428744 DMRTA1Q5VZB9 504 aa9.31□□□□□ -0.92
KIF3A-204ENST00000428744 CFAP44Q96MT7 982 aa9.31□□□□□ -0.92
KIF3A-204ENST00000428744 TK2O00142 265 aa9.29□□□□□ -0.92
KIF3A-204ENST00000428744 EVI5O60447 810 aa9.29□□□□□ -0.92
KIF3A-204ENST00000428744 FOSBP53539 338 aa9.29□□□□□ -0.92
KIF3A-204ENST00000428744 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
KIF3A-204ENST00000428744 HRO43593 1189 aa9.27□□□□□ -0.93
KIF3A-204ENST00000428744 MAP3K9P80192 1104 aa9.27□□□□□ -0.93
KIF3A-204ENST00000428744 CAMK2BQ13554 666 aa9.27□□□□□ -0.93
KIF3A-204ENST00000428744 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
KIF3A-204ENST00000428744 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
KIF3A-204ENST00000428744 JPH4Q96JJ6 628 aa9.24□□□□□ -0.93
KIF3A-204ENST00000428744 KCNK17Q96T54 332 aa9.23□□□□□ -0.93
KIF3A-204ENST00000428744 ZDHHC16Q969W1 377 aa9.21□□□□□ -0.94
KIF3A-204ENST00000428744 VPS9D1Q9Y2B5 631 aa9.21□□□□□ -0.94
KIF3A-204ENST00000428744 SLC4A5Q9BY07 1137 aa9.2□□□□□ -0.94
KIF3A-204ENST00000428744 ADAM33Q9BZ11 813 aa9.2□□□□□ -0.94
KIF3A-204ENST00000428744 PCDHGA10Q9Y5H3 936 aa9.2□□□□□ -0.94
KIF3A-204ENST00000428744 VSIG10Q8N0Z9 540 aa9.19□□□□□ -0.94
KIF3A-204ENST00000428744 PTPREP23469 700 aa9.18□□□□□ -0.94
KIF3A-204ENST00000428744 KCNH8Q96L42 1107 aa9.18□□□□□ -0.94
KIF3A-204ENST00000428744 BHMG1C9JSJ3 638 aaPredicted RBP9.17□□□□□ -0.94
KIF3A-204ENST00000428744 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
KIF3A-204ENST00000428744 ZBED2Q9BTP6 218 aa9.17□□□□□ -0.94
KIF3A-204ENST00000428744 DPYSL4O14531 572 aa9.16□□□□□ -0.94
KIF3A-204ENST00000428744 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
KIF3A-204ENST00000428744 PHF14O94880 888 aa9.15□□□□□ -0.94
KIF3A-204ENST00000428744 FBXW7Q969H0 707 aa9.13□□□□□ -0.95
KIF3A-204ENST00000428744 HCSTQ9UBK5 93 aa9.13□□□□□ -0.95
KIF3A-204ENST00000428744 TYW1BQ6NUM6 668 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms