RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
TIMM9P3-201ENST00000428659 BBXQ8WY36 941 aaPredicted RBP9.94□□□□□ -0.82
TIMM9P3-201ENST00000428659 POTEGQ6S5H5 508 aa9.93□□□□□ -0.82
TIMM9P3-201ENST00000428659 MARVELD3Q96A59 401 aa9.91□□□□□ -0.82
TIMM9P3-201ENST00000428659 POTEB3A0JP26 581 aa9.9□□□□□ -0.82
TIMM9P3-201ENST00000428659 POTEBQ6S5H4 581 aa9.9□□□□□ -0.82
TIMM9P3-201ENST00000428659 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
TIMM9P3-201ENST00000428659 KHSRPQ92945 711 aaKnown RBP eCLIP9.88□□□□□ -0.83
TIMM9P3-201ENST00000428659 SNPHO15079 494 aa9.86□□□□□ -0.83
TIMM9P3-201ENST00000428659 DSG2Q14126 1118 aa9.86□□□□□ -0.83
TIMM9P3-201ENST00000428659 PAXIP1Q6ZW49 1069 aaPredicted RBP9.85□□□□□ -0.83
TIMM9P3-201ENST00000428659 CRISPLD2Q9H0B8 497 aa9.85□□□□□ -0.83
TIMM9P3-201ENST00000428659 GPHNQ9NQX3 736 aaPredicted RBP9.85□□□□□ -0.83
TIMM9P3-201ENST00000428659 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
TIMM9P3-201ENST00000428659 TMC2Q8TDI7 906 aa9.84□□□□□ -0.83
TIMM9P3-201ENST00000428659 ARSIQ5FYB1 569 aa9.83□□□□□ -0.84
TIMM9P3-201ENST00000428659 CFAP44Q96MT7 982 aa9.83□□□□□ -0.84
TIMM9P3-201ENST00000428659 HOXB1P14653 301 aaPredicted RBP9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 FOXK1P85037 733 aa9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 PLPP6Q8IY26 295 aa9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 SPRYD3Q8NCJ5 442 aa9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 RYDENQ9NUL5 291 aaKnown RBP9.81□□□□□ -0.84
TIMM9P3-201ENST00000428659 DOK7Q18PE1 504 aa9.8□□□□□ -0.84
TIMM9P3-201ENST00000428659 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
TIMM9P3-201ENST00000428659 LARP6Q9BRS8 491 aaKnown RBP9.78□□□□□ -0.84
TIMM9P3-201ENST00000428659 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.77□□□□□ -0.85
TIMM9P3-201ENST00000428659 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
TIMM9P3-201ENST00000428659 EMP3P54852 163 aa9.76□□□□□ -0.85
TIMM9P3-201ENST00000428659 PCDHGA4Q9Y5G9 962 aa9.75□□□□□ -0.85
TIMM9P3-201ENST00000428659 SLC34A2O95436 690 aa9.74□□□□□ -0.85
TIMM9P3-201ENST00000428659 PDE4AP27815 886 aa9.74□□□□□ -0.85
TIMM9P3-201ENST00000428659 HS3ST6Q96QI5 342 aa9.74□□□□□ -0.85
TIMM9P3-201ENST00000428659 KDM4FA0A1W2PPD8 638 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 NUDT7P0C024 238 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 PPP1R15BQ5SWA1 713 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
TIMM9P3-201ENST00000428659 MFSD10Q14728 455 aa9.72□□□□□ -0.85
TIMM9P3-201ENST00000428659 PTCD2Q8WV60 388 aaKnown RBP9.71□□□□□ -0.86
TIMM9P3-201ENST00000428659 ZSWIM6Q9HCJ5 1215 aa9.71□□□□□ -0.86
TIMM9P3-201ENST00000428659 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
TIMM9P3-201ENST00000428659 EMILIN3Q9NT22 766 aa9.7□□□□□ -0.86
TIMM9P3-201ENST00000428659 RIMBP2O15034 1052 aa9.69□□□□□ -0.86
TIMM9P3-201ENST00000428659 VARS2Q5ST30 1063 aaKnown RBP9.68□□□□□ -0.86
TIMM9P3-201ENST00000428659 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
TIMM9P3-201ENST00000428659 DDX27Q96GQ7 796 aaKnown RBP9.68□□□□□ -0.86
TIMM9P3-201ENST00000428659 ERBB3P21860 1342 aa9.67□□□□□ -0.86
TIMM9P3-201ENST00000428659 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
TIMM9P3-201ENST00000428659 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
TIMM9P3-201ENST00000428659 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
TIMM9P3-201ENST00000428659 ZNF316A6NFI3 1004 aaPredicted RBP9.65□□□□□ -0.86
TIMM9P3-201ENST00000428659 POTEEQ6S8J3 1075 aa9.64□□□□□ -0.87
TIMM9P3-201ENST00000428659 CAMK2BQ13554 666 aa9.61□□□□□ -0.87
TIMM9P3-201ENST00000428659 PLCB2Q00722 1185 aa9.58□□□□□ -0.88
TIMM9P3-201ENST00000428659 PCDH10Q9P2E7 1040 aa9.58□□□□□ -0.88
TIMM9P3-201ENST00000428659 ZNF687Q8N1G0 1237 aa9.57□□□□□ -0.88
TIMM9P3-201ENST00000428659 AXIN2Q9Y2T1 843 aa9.57□□□□□ -0.88
TIMM9P3-201ENST00000428659 DPYSL4O14531 572 aa9.55□□□□□ -0.88
TIMM9P3-201ENST00000428659 ANO8Q9HCE9 1232 aaPredicted RBP9.55□□□□□ -0.88
TIMM9P3-201ENST00000428659 PLSCR2Q9NRY7 297 aa9.55□□□□□ -0.88
TIMM9P3-201ENST00000428659 EVI5O60447 810 aa9.54□□□□□ -0.88
TIMM9P3-201ENST00000428659 TBC1D12O60347 775 aa9.53□□□□□ -0.88
TIMM9P3-201ENST00000428659 MAP3K9P80192 1104 aa9.53□□□□□ -0.88
TIMM9P3-201ENST00000428659 SPNS2Q8IVW8 549 aa9.51□□□□□ -0.89
TIMM9P3-201ENST00000428659 E2F4Q16254 413 aa9.49□□□□□ -0.89
TIMM9P3-201ENST00000428659 PSEN2P49810 448 aa9.48□□□□□ -0.89
TIMM9P3-201ENST00000428659 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
TIMM9P3-201ENST00000428659 KDM2AQ9Y2K7 1162 aa9.48□□□□□ -0.89
TIMM9P3-201ENST00000428659 FOSBP53539 338 aa9.47□□□□□ -0.89
TIMM9P3-201ENST00000428659 ZNF454Q8N9F8 522 aa9.47□□□□□ -0.89
TIMM9P3-201ENST00000428659 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.9
TIMM9P3-201ENST00000428659 HAP1P54257 671 aaPredicted RBP9.45□□□□□ -0.9
TIMM9P3-201ENST00000428659 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
TIMM9P3-201ENST00000428659 WDR70Q9NW82 654 aa9.45□□□□□ -0.9
TIMM9P3-201ENST00000428659 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
TIMM9P3-201ENST00000428659 ANKRD13DQ6ZTN6 518 aa9.44□□□□□ -0.9
TIMM9P3-201ENST00000428659 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
TIMM9P3-201ENST00000428659 MMRN1Q13201 1228 aa9.43□□□□□ -0.9
TIMM9P3-201ENST00000428659 DDX12PQ92771 950 aa9.43□□□□□ -0.9
TIMM9P3-201ENST00000428659 LSM11P83369 360 aaKnown RBP eCLIP9.42□□□□□ -0.9
TIMM9P3-201ENST00000428659 ARHGAP33O14559 1287 aa9.41□□□□□ -0.9
TIMM9P3-201ENST00000428659 PPP4R3BQ5MIZ7 849 aa9.41□□□□□ -0.9
TIMM9P3-201ENST00000428659 ARIH1Q9Y4X5 557 aaPredicted RBP9.41□□□□□ -0.9
TIMM9P3-201ENST00000428659 PDIA6Q15084 440 aa9.4□□□□□ -0.9
TIMM9P3-201ENST00000428659 JPH4Q96JJ6 628 aa9.4□□□□□ -0.9
TIMM9P3-201ENST00000428659 KCNK17Q96T54 332 aa9.4□□□□□ -0.9
TIMM9P3-201ENST00000428659 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
TIMM9P3-201ENST00000428659 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
TIMM9P3-201ENST00000428659 COL9A1P20849 921 aa9.37□□□□□ -0.91
TIMM9P3-201ENST00000428659 PTGER2P43116 358 aa9.37□□□□□ -0.91
TIMM9P3-201ENST00000428659 BCL2L12Q9HB09 334 aa9.37□□□□□ -0.91
TIMM9P3-201ENST00000428659 PBX2P40425 430 aa9.36□□□□□ -0.91
TIMM9P3-201ENST00000428659 PHF14O94880 888 aa9.35□□□□□ -0.91
TIMM9P3-201ENST00000428659 RBM33Q96EV2 1170 aaKnown RBP9.35□□□□□ -0.91
TIMM9P3-201ENST00000428659 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
TIMM9P3-201ENST00000428659 MLLT3P42568 568 aaPredicted RBP9.34□□□□□ -0.91
TIMM9P3-201ENST00000428659 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
TIMM9P3-201ENST00000428659 HRO43593 1189 aa9.33□□□□□ -0.92
TIMM9P3-201ENST00000428659 TSR1Q2NL82 804 aaKnown RBP9.33□□□□□ -0.92
TIMM9P3-201ENST00000428659 TYW1BQ6NUM6 668 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms