RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 NPM1P06748 294 aaKnown RBP eCLIP13.63□□□□□ -0.23
NR1I3-209ENST00000428574 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
NR1I3-209ENST00000428574 ASXL2Q76L83 1435 aa13.63□□□□□ -0.23
NR1I3-209ENST00000428574 ABCA9Q8IUA7 1624 aa13.62□□□□□ -0.23
NR1I3-209ENST00000428574 FAM50AQ14320 339 aaKnown RBP13.62□□□□□ -0.23
NR1I3-209ENST00000428574 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
NR1I3-209ENST00000428574 HFM1A2PYH4 1435 aa13.62□□□□□ -0.23
NR1I3-209ENST00000428574 TTC37Q6PGP7 1564 aa13.62□□□□□ -0.23
NR1I3-209ENST00000428574 MYO5CQ9NQX4 1742 aa13.61□□□□□ -0.23
NR1I3-209ENST00000428574 SHANK2Q9UPX8 1470 aa13.61□□□□□ -0.23
NR1I3-209ENST00000428574 ROCK1Q13464 1354 aa13.61□□□□□ -0.23
NR1I3-209ENST00000428574 PPP6R1Q9UPN7 881 aa13.61□□□□□ -0.23
NR1I3-209ENST00000428574 PLCH2O75038 1416 aa13.61□□□□□ -0.23
NR1I3-209ENST00000428574 ARHGEF5Q12774 1597 aa13.61□□□□□ -0.23
NR1I3-209ENST00000428574 KIAA1107Q9UPP5 1409 aa13.6□□□□□ -0.23
NR1I3-209ENST00000428574 DAPK1P53355 1430 aa13.59□□□□□ -0.23
NR1I3-209ENST00000428574 RSPH4AQ5TD94 716 aa13.59□□□□□ -0.23
NR1I3-209ENST00000428574 SETD5Q9C0A6 1442 aa13.58□□□□□ -0.24
NR1I3-209ENST00000428574 ADGRL2O95490 1459 aa13.57□□□□□ -0.24
NR1I3-209ENST00000428574 CDC42BPBQ9Y5S2 1711 aa13.57□□□□□ -0.24
NR1I3-209ENST00000428574 ADRA2BP18089 450 aa13.57□□□□□ -0.24
NR1I3-209ENST00000428574 ZEB1P37275 1124 aaPredicted RBP13.57□□□□□ -0.24
NR1I3-209ENST00000428574 CLSPNQ9HAW4 1339 aa13.57□□□□□ -0.24
NR1I3-209ENST00000428574 CROCC2H7BZ55 1655 aa13.56□□□□□ -0.24
NR1I3-209ENST00000428574 ABCC5O15440 1437 aa13.56□□□□□ -0.24
NR1I3-209ENST00000428574 ARHGAP5Q13017 1502 aa13.55□□□□□ -0.24
NR1I3-209ENST00000428574 SAMD9LQ8IVG5 1584 aa13.55□□□□□ -0.24
NR1I3-209ENST00000428574 GCC2Q8IWJ2 1684 aa13.55□□□□□ -0.24
NR1I3-209ENST00000428574 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
NR1I3-209ENST00000428574 GLI2P10070 1586 aa13.54□□□□□ -0.24
NR1I3-209ENST00000428574 CFAP74Q9C0B2 1584 aa13.54□□□□□ -0.24
NR1I3-209ENST00000428574 CCDC141Q6ZP82 1450 aa13.54□□□□□ -0.24
NR1I3-209ENST00000428574 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
NR1I3-209ENST00000428574 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
NR1I3-209ENST00000428574 NAIPQ13075 1403 aa13.53□□□□□ -0.24
NR1I3-209ENST00000428574 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
NR1I3-209ENST00000428574 ADGBQ8N7X0 1667 aa13.53□□□□□ -0.24
NR1I3-209ENST00000428574 ABCC1P33527 1531 aa13.52□□□□□ -0.25
NR1I3-209ENST00000428574 RAB3GAP2Q9H2M9 1393 aa13.51□□□□□ -0.25
NR1I3-209ENST00000428574 ANKRD30AQ9BXX3 1397 aa13.49□□□□□ -0.25
NR1I3-209ENST00000428574 ZNF644Q9H582 1327 aaPredicted RBP13.49□□□□□ -0.25
NR1I3-209ENST00000428574 CYB5RLQ6IPT4 315 aa13.49□□□□□ -0.25
NR1I3-209ENST00000428574 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
NR1I3-209ENST00000428574 FANCAO15360 1455 aa13.48□□□□□ -0.25
NR1I3-209ENST00000428574 NCOA1Q15788 1441 aa13.48□□□□□ -0.25
NR1I3-209ENST00000428574 ITGAEP38570 1179 aa13.48□□□□□ -0.25
NR1I3-209ENST00000428574 KCNH8Q96L42 1107 aa13.48□□□□□ -0.25
NR1I3-209ENST00000428574 NEO1Q92859 1461 aa13.48□□□□□ -0.25
NR1I3-209ENST00000428574 C9orf84Q5VXU9 1444 aa13.47□□□□□ -0.25
NR1I3-209ENST00000428574 PLXNC1O60486 1568 aa13.47□□□□□ -0.25
NR1I3-209ENST00000428574 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
NR1I3-209ENST00000428574 CCER1Q8TC90 406 aaPredicted RBP13.46□□□□□ -0.25
NR1I3-209ENST00000428574 CD109Q6YHK3 1445 aa13.46□□□□□ -0.26
NR1I3-209ENST00000428574 MAP3K4Q9Y6R4 1608 aa13.46□□□□□ -0.26
NR1I3-209ENST00000428574 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
NR1I3-209ENST00000428574 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
NR1I3-209ENST00000428574 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
NR1I3-209ENST00000428574 ZNF777Q9ULD5 760 aaPredicted RBP13.45□□□□□ -0.26
NR1I3-209ENST00000428574 DIP2BQ9P265 1576 aa13.44□□□□□ -0.26
NR1I3-209ENST00000428574 ARHGEF12Q9NZN5 1544 aa13.42□□□□□ -0.26
NR1I3-209ENST00000428574 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
NR1I3-209ENST00000428574 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
NR1I3-209ENST00000428574 ANKRD50Q9ULJ7 1429 aa13.39□□□□□ -0.27
NR1I3-209ENST00000428574 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
NR1I3-209ENST00000428574 KIF15Q9NS87 1388 aa13.39□□□□□ -0.27
NR1I3-209ENST00000428574 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
NR1I3-209ENST00000428574 KDM5CP41229 1560 aa13.39□□□□□ -0.27
NR1I3-209ENST00000428574 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
NR1I3-209ENST00000428574 ZFYVE16Q7Z3T8 1539 aa13.39□□□□□ -0.27
NR1I3-209ENST00000428574 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
NR1I3-209ENST00000428574 ERBINQ96RT1 1412 aa13.39□□□□□ -0.27
NR1I3-209ENST00000428574 KDM5DQ9BY66 1539 aa13.38□□□□□ -0.27
NR1I3-209ENST00000428574 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
NR1I3-209ENST00000428574 SCAPERQ9BY12 1400 aa13.38□□□□□ -0.27
NR1I3-209ENST00000428574 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
NR1I3-209ENST00000428574 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
NR1I3-209ENST00000428574 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
NR1I3-209ENST00000428574 MLH3Q9UHC1 1453 aa13.36□□□□□ -0.27
NR1I3-209ENST00000428574 ATP7AQ04656 1500 aa13.35□□□□□ -0.27
NR1I3-209ENST00000428574 SPAG9O60271 1321 aaKnown RBP13.34□□□□□ -0.27
NR1I3-209ENST00000428574 KDM6BO15054 1643 aa13.33□□□□□ -0.28
NR1I3-209ENST00000428574 DENND4BO75064 1496 aaPredicted RBP13.33□□□□□ -0.28
NR1I3-209ENST00000428574 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.28
NR1I3-209ENST00000428574 EIF2AK4Q9P2K8 1649 aaKnown RBP13.32□□□□□ -0.28
NR1I3-209ENST00000428574 PIAS4Q8N2W9 510 aaPredicted RBP13.32□□□□□ -0.28
NR1I3-209ENST00000428574 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
NR1I3-209ENST00000428574 UNC13BO14795 1591 aa13.32□□□□□ -0.28
NR1I3-209ENST00000428574 HECW2Q9P2P5 1572 aa13.32□□□□□ -0.28
NR1I3-209ENST00000428574 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
NR1I3-209ENST00000428574 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
NR1I3-209ENST00000428574 PPRC1Q5VV67 1664 aaKnown RBP13.29□□□□□ -0.28
NR1I3-209ENST00000428574 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
NR1I3-209ENST00000428574 KIF13AQ9H1H9 1805 aa13.28□□□□□ -0.28
NR1I3-209ENST00000428574 PZPP20742 1482 aa13.28□□□□□ -0.28
NR1I3-209ENST00000428574 BCORL1Q5H9F3 1711 aa13.27□□□□□ -0.28
NR1I3-209ENST00000428574 RICTORQ6R327 1708 aa13.27□□□□□ -0.28
NR1I3-209ENST00000428574 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
NR1I3-209ENST00000428574 DHX29Q7Z478 1369 aaKnown RBP13.27□□□□□ -0.29
NR1I3-209ENST00000428574 DEPDC5O75140 1603 aa13.27□□□□□ -0.29
NR1I3-209ENST00000428574 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms