RNA–Protein interactions for RNA: ENST00000428554.6

CCDC30-203, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-203ENST00000428554 BRPF1P55201 1214 aaPredicted RBP5.65□□□□□ -1.51
CCDC30-203ENST00000428554 ASTLQ6HA08 431 aaPredicted RBP5.64□□□□□ -1.51
CCDC30-203ENST00000428554 BMP2KQ9NSY1 1161 aaPredicted RBP5.63□□□□□ -1.51
CCDC30-203ENST00000428554 CDK11AQ9UQ88 783 aaPredicted RBP5.63□□□□□ -1.51
CCDC30-203ENST00000428554 P3H3Q8IVL6 736 aa5.63□□□□□ -1.51
CCDC30-203ENST00000428554 PCDH10Q9P2E7 1040 aa5.63□□□□□ -1.51
CCDC30-203ENST00000428554 NCKAP5LQ9HCH0 1330 aa5.63□□□□□ -1.51
CCDC30-203ENST00000428554 TTLL13PA6NNM8 815 aa5.63□□□□□ -1.51
CCDC30-203ENST00000428554 ATMINO43313 823 aaPredicted RBP5.63□□□□□ -1.51
CCDC30-203ENST00000428554 ZMYND15Q9H091 742 aa5.62□□□□□ -1.51
CCDC30-203ENST00000428554 ZBTB7CA1YPR0 619 aa5.62□□□□□ -1.51
CCDC30-203ENST00000428554 POTEIP0CG38 1075 aa5.62□□□□□ -1.51
CCDC30-203ENST00000428554 RSPH6AQ9H0K4 717 aa5.61□□□□□ -1.51
CCDC30-203ENST00000428554 HSP90B1P14625 803 aaKnown RBP5.61□□□□□ -1.51
CCDC30-203ENST00000428554 GOLGA2Q08379 1002 aa5.61□□□□□ -1.51
CCDC30-203ENST00000428554 ATN1P54259 1190 aaPredicted RBP5.6□□□□□ -1.51
CCDC30-203ENST00000428554 PUS7Q96PZ0 661 aaKnown RBP5.59□□□□□ -1.51
CCDC30-203ENST00000428554 MKRN3Q13064 507 aaKnown RBP5.59□□□□□ -1.51
CCDC30-203ENST00000428554 LARP6Q9BRS8 491 aaKnown RBP5.59□□□□□ -1.51
CCDC30-203ENST00000428554 TRIM35Q9UPQ4 493 aa5.59□□□□□ -1.51
CCDC30-203ENST00000428554 E2F4Q16254 413 aa5.59□□□□□ -1.52
CCDC30-203ENST00000428554 IGSF3O75054 1194 aa5.58□□□□□ -1.52
CCDC30-203ENST00000428554 CDK11BP21127 795 aaKnown RBP5.58□□□□□ -1.52
CCDC30-203ENST00000428554 SLC39A7Q92504 469 aa5.58□□□□□ -1.52
CCDC30-203ENST00000428554 CRISPLD2Q9H0B8 497 aa5.58□□□□□ -1.52
CCDC30-203ENST00000428554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.57□□□□□ -1.52
CCDC30-203ENST00000428554 C7P10643 843 aa5.57□□□□□ -1.52
CCDC30-203ENST00000428554 IER5LQ5T953 404 aa5.57□□□□□ -1.52
CCDC30-203ENST00000428554 DPY19L2Q6NUT2 758 aa5.57□□□□□ -1.52
CCDC30-203ENST00000428554 ARHGEF1Q92888 912 aaKnown RBP5.56□□□□□ -1.52
CCDC30-203ENST00000428554 SEMA3EO15041 775 aa5.56□□□□□ -1.52
CCDC30-203ENST00000428554 MFSD10Q14728 455 aa5.56□□□□□ -1.52
CCDC30-203ENST00000428554 LMOD2Q6P5Q4 547 aa5.56□□□□□ -1.52
CCDC30-203ENST00000428554 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.56□□□□□ -1.52
CCDC30-203ENST00000428554 PDE4AP27815 886 aa5.55□□□□□ -1.52
CCDC30-203ENST00000428554 NECTIN2Q92692 538 aa5.55□□□□□ -1.52
CCDC30-203ENST00000428554 METRNQ9UJH8 293 aa5.55□□□□□ -1.52
CCDC30-203ENST00000428554 PDIA4P13667 645 aaKnown RBP5.54□□□□□ -1.52
CCDC30-203ENST00000428554 DDX27Q96GQ7 796 aaKnown RBP5.54□□□□□ -1.52
CCDC30-203ENST00000428554 SEC24BO95487 1268 aa5.53□□□□□ -1.52
CCDC30-203ENST00000428554 TESPA1A2RU30 521 aaPredicted RBP5.52□□□□□ -1.53
CCDC30-203ENST00000428554 PDCD7Q8N8D1 485 aaKnown RBP5.52□□□□□ -1.53
CCDC30-203ENST00000428554 CHMP4AQ9BY43 222 aa5.51□□□□□ -1.53
CCDC30-203ENST00000428554 C1orf115Q9H7X2 142 aa5.51□□□□□ -1.53
CCDC30-203ENST00000428554 IRX5P78411 483 aaPredicted RBP5.51□□□□□ -1.53
CCDC30-203ENST00000428554 CAMK2BQ13554 666 aa5.51□□□□□ -1.53
CCDC30-203ENST00000428554 PLCG2P16885 1265 aa5.51□□□□□ -1.53
CCDC30-203ENST00000428554 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
CCDC30-203ENST00000428554 OCEL1Q9H607 264 aa5.51□□□□□ -1.53
CCDC30-203ENST00000428554 MICALL2Q8IY33 904 aa5.5□□□□□ -1.53
CCDC30-203ENST00000428554 PPP1R15BQ5SWA1 713 aa5.5□□□□□ -1.53
CCDC30-203ENST00000428554 GPHNQ9NQX3 736 aaPredicted RBP5.5□□□□□ -1.53
CCDC30-203ENST00000428554 DSG2Q14126 1118 aa5.49□□□□□ -1.53
CCDC30-203ENST00000428554 COLQQ9Y215 455 aaPredicted RBP5.49□□□□□ -1.53
CCDC30-203ENST00000428554 SOCS7O14512 581 aa5.49□□□□□ -1.53
CCDC30-203ENST00000428554 ZC3H15Q8WU90 426 aaKnown RBP5.49□□□□□ -1.53
CCDC30-203ENST00000428554 ARIH1Q9Y4X5 557 aaPredicted RBP5.49□□□□□ -1.53
CCDC30-203ENST00000428554 POTEFA5A3E0 1075 aa5.48□□□□□ -1.53
CCDC30-203ENST00000428554 EMILIN3Q9NT22 766 aa5.48□□□□□ -1.53
CCDC30-203ENST00000428554 MLLT3P42568 568 aaPredicted RBP5.47□□□□□ -1.53
CCDC30-203ENST00000428554 NEUROD2Q15784 382 aa5.46□□□□□ -1.54
CCDC30-203ENST00000428554 TRAIPQ9BWF2 469 aa5.46□□□□□ -1.54
CCDC30-203ENST00000428554 DPYSL4O14531 572 aa5.46□□□□□ -1.54
CCDC30-203ENST00000428554 TMEM121BQ9BXQ6 578 aaPredicted RBP5.46□□□□□ -1.54
CCDC30-203ENST00000428554 BOLA1Q9Y3E2 137 aa5.45□□□□□ -1.54
CCDC30-203ENST00000428554 C2orf72A6NCS6 295 aa5.44□□□□□ -1.54
CCDC30-203ENST00000428554 POTEB2H3BUK9 544 aa5.44□□□□□ -1.54
CCDC30-203ENST00000428554 BRD2P25440 801 aaKnown RBP5.44□□□□□ -1.54
CCDC30-203ENST00000428554 FOXK1P85037 733 aa5.44□□□□□ -1.54
CCDC30-203ENST00000428554 RBM26Q5T8P6 1007 aaKnown RBP5.44□□□□□ -1.54
CCDC30-203ENST00000428554 TMC2Q8TDI7 906 aa5.44□□□□□ -1.54
CCDC30-203ENST00000428554 L3MBTL3Q96JM7 780 aaPredicted RBP5.44□□□□□ -1.54
CCDC30-203ENST00000428554 KIF3CO14782 793 aa5.44□□□□□ -1.54
CCDC30-203ENST00000428554 TMEM92Q6UXU6 159 aa5.44□□□□□ -1.54
CCDC30-203ENST00000428554 KCTD17Q8N5Z5 321 aa5.44□□□□□ -1.54
CCDC30-203ENST00000428554 SLC24A3Q9HC58 644 aa5.44□□□□□ -1.54
CCDC30-203ENST00000428554 MAMSTRQ6ZN01 415 aa5.43□□□□□ -1.54
CCDC30-203ENST00000428554 PLPP6Q8IY26 295 aa5.43□□□□□ -1.54
CCDC30-203ENST00000428554 UBE2Q2Q8WVN8 375 aa5.43□□□□□ -1.54
CCDC30-203ENST00000428554 G3V3G9 751 aa5.42□□□□□ -1.54
CCDC30-203ENST00000428554 ARID3AQ99856 593 aa5.42□□□□□ -1.54
CCDC30-203ENST00000428554 ZMYND10O75800 440 aa5.42□□□□□ -1.54
CCDC30-203ENST00000428554 SMYD5Q6GMV2 418 aa5.42□□□□□ -1.54
CCDC30-203ENST00000428554 PDIA6Q15084 440 aa5.41□□□□□ -1.54
CCDC30-203ENST00000428554 SCUBE2Q9NQ36 999 aa5.41□□□□□ -1.54
CCDC30-203ENST00000428554 POTEJP0CG39 1038 aa5.41□□□□□ -1.54
CCDC30-203ENST00000428554 RAD21O60216 631 aa5.4□□□□□ -1.55
CCDC30-203ENST00000428554 UPF1Q92900 1129 aaKnown RBP eCLIP5.39□□□□□ -1.55
CCDC30-203ENST00000428554 C3orf67Q6ZVT6 689 aa5.39□□□□□ -1.55
CCDC30-203ENST00000428554 SPDYE16A6NNV3 312 aaPredicted RBP5.38□□□□□ -1.55
CCDC30-203ENST00000428554 BARGINQ6ZT62 677 aa5.38□□□□□ -1.55
CCDC30-203ENST00000428554 GPIHBP1Q8IV16 184 aa5.38□□□□□ -1.55
CCDC30-203ENST00000428554 OTUD5Q96G74 571 aa5.38□□□□□ -1.55
CCDC30-203ENST00000428554 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.38□□□□□ -1.55
CCDC30-203ENST00000428554 POTEMA6NI47 508 aa5.37□□□□□ -1.55
CCDC30-203ENST00000428554 LMTK3Q96Q04 1460 aa5.37□□□□□ -1.55
CCDC30-203ENST00000428554 MTMR7Q9Y216 660 aa5.37□□□□□ -1.55
CCDC30-203ENST00000428554 GRXCR2A6NFK2 248 aa5.36□□□□□ -1.55
CCDC30-203ENST00000428554 MAP3K9P80192 1104 aa5.36□□□□□ -1.55
CCDC30-203ENST00000428554 APBB1O00213 710 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms