RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 ZMYM4Q5VZL5 1548 aa21.05■□□□□ 0.96
PHF1-205ENST00000428274 ARHGAP5Q13017 1502 aa21.04■□□□□ 0.96
PHF1-205ENST00000428274 PREX2Q70Z35 1606 aa21.03■□□□□ 0.96
PHF1-205ENST00000428274 POGZQ7Z3K3 1410 aa21.03■□□□□ 0.96
PHF1-205ENST00000428274 YEATS2Q9ULM3 1422 aa21.03■□□□□ 0.96
PHF1-205ENST00000428274 ARID4BQ4LE39 1312 aaPredicted RBP21.02■□□□□ 0.95
PHF1-205ENST00000428274 CDC42BPAQ5VT25 1732 aa21.01■□□□□ 0.95
PHF1-205ENST00000428274 ARHGEF40Q8TER5 1519 aa21.01■□□□□ 0.95
PHF1-205ENST00000428274 MAGI2Q86UL8 1455 aa21.01■□□□□ 0.95
PHF1-205ENST00000428274 HECW2Q9P2P5 1572 aa21■□□□□ 0.95
PHF1-205ENST00000428274 ADAMTSL3P82987 1691 aa20.97■□□□□ 0.95
PHF1-205ENST00000428274 PTPRMP28827 1452 aa20.97■□□□□ 0.95
PHF1-205ENST00000428274 ZFYVE16Q7Z3T8 1539 aa20.96■□□□□ 0.95
PHF1-205ENST00000428274 GPATCH8Q9UKJ3 1502 aaKnown RBP20.96■□□□□ 0.95
PHF1-205ENST00000428274 MTUS2Q5JR59 1369 aa20.96■□□□□ 0.95
PHF1-205ENST00000428274 ZNF518AQ6AHZ1 1483 aa20.94■□□□□ 0.94
PHF1-205ENST00000428274 AFAP1Q8N556 730 aa20.94■□□□□ 0.94
PHF1-205ENST00000428274 VPS8Q8N3P4 1428 aa20.94■□□□□ 0.94
PHF1-205ENST00000428274 KDM5CP41229 1560 aa20.93■□□□□ 0.94
PHF1-205ENST00000428274 ABCC1P33527 1531 aa20.93■□□□□ 0.94
PHF1-205ENST00000428274 ARHGEF12Q9NZN5 1544 aa20.93■□□□□ 0.94
PHF1-205ENST00000428274 BCORL1Q5H9F3 1711 aa20.92■□□□□ 0.94
PHF1-205ENST00000428274 SIGLEC1Q9BZZ2 1709 aa20.92■□□□□ 0.94
PHF1-205ENST00000428274 EHBP1L1Q8N3D4 1523 aa20.91■□□□□ 0.94
PHF1-205ENST00000428274 ITSN2Q9NZM3 1697 aa20.9■□□□□ 0.94
PHF1-205ENST00000428274 MLECQ14165 292 aa20.9■□□□□ 0.94
PHF1-205ENST00000428274 MADDQ8WXG6 1647 aa20.89■□□□□ 0.93
PHF1-205ENST00000428274 TRAPPC8Q9Y2L5 1435 aa20.88■□□□□ 0.93
PHF1-205ENST00000428274 CCNB3Q8WWL7 1395 aa20.88■□□□□ 0.93
PHF1-205ENST00000428274 TIAM1Q13009 1591 aa20.88■□□□□ 0.93
PHF1-205ENST00000428274 SAMD9LQ8IVG5 1584 aa20.88■□□□□ 0.93
PHF1-205ENST00000428274 ATP10AO60312 1499 aa20.88■□□□□ 0.93
PHF1-205ENST00000428274 MLH3Q9UHC1 1453 aa20.87■□□□□ 0.93
PHF1-205ENST00000428274 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
PHF1-205ENST00000428274 CFDP1Q9UEE9 299 aaPredicted RBP20.86■□□□□ 0.93
PHF1-205ENST00000428274 ZNF777Q9ULD5 760 aaPredicted RBP20.85■□□□□ 0.93
PHF1-205ENST00000428274 ILDR1Q86SU0 546 aaPredicted RBP20.83■□□□□ 0.93
PHF1-205ENST00000428274 C9orf84Q5VXU9 1444 aa20.83■□□□□ 0.93
PHF1-205ENST00000428274 KIAA1107Q9UPP5 1409 aa20.83■□□□□ 0.93
PHF1-205ENST00000428274 MAP3K1Q13233 1512 aa20.82■□□□□ 0.92
PHF1-205ENST00000428274 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
PHF1-205ENST00000428274 SUPT6HQ7KZ85 1726 aaKnown RBP20.81■□□□□ 0.92
PHF1-205ENST00000428274 DIP2CQ9Y2E4 1556 aa20.81■□□□□ 0.92
PHF1-205ENST00000428274 SYCP2Q9BX26 1530 aa20.81■□□□□ 0.92
PHF1-205ENST00000428274 KIDINS220Q9ULH0 1771 aa20.81■□□□□ 0.92
PHF1-205ENST00000428274 NCOA2Q15596 1464 aa20.81■□□□□ 0.92
PHF1-205ENST00000428274 HNRNPMP52272 730 aaKnown RBP eCLIP20.8■□□□□ 0.92
PHF1-205ENST00000428274 LRRC9Q6ZRR7 1453 aa20.8■□□□□ 0.92
PHF1-205ENST00000428274 ABCA6Q8N139 1617 aa20.79■□□□□ 0.92
PHF1-205ENST00000428274 REREQ9P2R6 1566 aa20.79■□□□□ 0.92
PHF1-205ENST00000428274 RIMS1Q86UR5 1692 aaKnown RBP20.77■□□□□ 0.92
PHF1-205ENST00000428274 ZNF644Q9H582 1327 aaPredicted RBP20.77■□□□□ 0.91
PHF1-205ENST00000428274 LMTK3Q96Q04 1460 aa20.76■□□□□ 0.91
PHF1-205ENST00000428274 CEBPAP49715 358 aaPredicted RBP20.76■□□□□ 0.91
PHF1-205ENST00000428274 HSPA2P54652 639 aa20.76■□□□□ 0.91
PHF1-205ENST00000428274 MYT1LQ9UL68 1186 aa20.76■□□□□ 0.91
PHF1-205ENST00000428274 KANK4Q5T7N3 995 aaPredicted RBP20.75■□□□□ 0.91
PHF1-205ENST00000428274 MBD5Q9P267 1494 aa20.74■□□□□ 0.91
PHF1-205ENST00000428274 SPAG9O60271 1321 aaKnown RBP20.74■□□□□ 0.91
PHF1-205ENST00000428274 FER1L4A9Z1Z3 1794 aa20.72■□□□□ 0.91
PHF1-205ENST00000428274 AGLP35573 1532 aa20.72■□□□□ 0.91
PHF1-205ENST00000428274 INO80Q9ULG1 1556 aaPredicted RBP20.71■□□□□ 0.91
PHF1-205ENST00000428274 ATP7AQ04656 1500 aa20.7■□□□□ 0.9
PHF1-205ENST00000428274 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
PHF1-205ENST00000428274 RSPH4AQ5TD94 716 aa20.64■□□□□ 0.89
PHF1-205ENST00000428274 RTEL1-TNFRSF6BF6WH68 1400 aa20.63■□□□□ 0.89
PHF1-205ENST00000428274 APLP2Q06481 763 aa20.63■□□□□ 0.89
PHF1-205ENST00000428274 PLXNC1O60486 1568 aa20.63■□□□□ 0.89
PHF1-205ENST00000428274 CCDC141Q6ZP82 1450 aa20.62■□□□□ 0.89
PHF1-205ENST00000428274 MYOM3Q5VTT5 1437 aa20.61■□□□□ 0.89
PHF1-205ENST00000428274 ARHGEF5Q12774 1597 aa20.61■□□□□ 0.89
PHF1-205ENST00000428274 A2MP01023 1474 aa20.61■□□□□ 0.89
PHF1-205ENST00000428274 MIA2Q96PC5 1412 aa20.61■□□□□ 0.89
PHF1-205ENST00000428274 ADGBQ8N7X0 1667 aa20.61■□□□□ 0.89
PHF1-205ENST00000428274 SETD1BQ9UPS6 1966 aaKnown RBP20.59■□□□□ 0.89
PHF1-205ENST00000428274 DHX29Q7Z478 1369 aaKnown RBP20.54■□□□□ 0.88
PHF1-205ENST00000428274 C3P01024 1663 aa20.54■□□□□ 0.88
PHF1-205ENST00000428274 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
PHF1-205ENST00000428274 TSPY4P0CV99 314 aa20.52■□□□□ 0.88
PHF1-205ENST00000428274 TSPY10P0CW01 314 aa20.52■□□□□ 0.88
PHF1-205ENST00000428274 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
PHF1-205ENST00000428274 MAST1Q9Y2H9 1570 aa20.51■□□□□ 0.87
PHF1-205ENST00000428274 MROH2AA6NES4 1674 aa20.5■□□□□ 0.87
PHF1-205ENST00000428274 PREX1Q8TCU6 1659 aa20.49■□□□□ 0.87
PHF1-205ENST00000428274 FBXO41Q8TF61 875 aa20.48■□□□□ 0.87
PHF1-205ENST00000428274 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
PHF1-205ENST00000428274 PTPN23Q9H3S7 1636 aa20.48■□□□□ 0.87
PHF1-205ENST00000428274 FGD6Q6ZV73 1430 aa20.47■□□□□ 0.87
PHF1-205ENST00000428274 GGT6Q6P531 493 aa20.47■□□□□ 0.87
PHF1-205ENST00000428274 ZMYM3Q14202 1370 aa20.46■□□□□ 0.87
PHF1-205ENST00000428274 UHRF1BP1Q6BDS2 1440 aa20.45■□□□□ 0.86
PHF1-205ENST00000428274 CLTCQ00610 1675 aaKnown RBP20.45■□□□□ 0.86
PHF1-205ENST00000428274 TCOF1Q13428 1488 aaKnown RBP20.45■□□□□ 0.86
PHF1-205ENST00000428274 KIF3BO15066 747 aa20.43■□□□□ 0.86
PHF1-205ENST00000428274 ABCC5O15440 1437 aa20.43■□□□□ 0.86
PHF1-205ENST00000428274 NPATQ14207 1427 aa20.41■□□□□ 0.86
PHF1-205ENST00000428274 SHANK2Q9UPX8 1470 aa20.41■□□□□ 0.86
PHF1-205ENST00000428274 CROCC2H7BZ55 1655 aa20.41■□□□□ 0.86
PHF1-205ENST00000428274 DNMT1P26358 1616 aaKnown RBP20.39■□□□□ 0.86
PHF1-205ENST00000428274 DAPK1P53355 1430 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 198 ms