RNA–Protein interactions for RNA: ENST00000428119.1

RHBDD2-203, Transcript of rhomboid domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene RHBDD2, Length 1,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD2-203ENST00000428119 ZNF518AQ6AHZ1 1483 aa22.55■■□□□ 1.2
RHBDD2-203ENST00000428119 MTUS2Q5JR59 1369 aa22.55■■□□□ 1.2
RHBDD2-203ENST00000428119 EHBP1L1Q8N3D4 1523 aa22.55■■□□□ 1.2
RHBDD2-203ENST00000428119 ARHGEF40Q8TER5 1519 aa22.55■■□□□ 1.2
RHBDD2-203ENST00000428119 VPS8Q8N3P4 1428 aa22.53■■□□□ 1.2
RHBDD2-203ENST00000428119 SCAPERQ9BY12 1400 aa22.52■■□□□ 1.2
RHBDD2-203ENST00000428119 RAPGEF3O95398 923 aa22.51■■□□□ 1.19
RHBDD2-203ENST00000428119 PLEKHH2Q8IVE3 1493 aa22.51■■□□□ 1.19
RHBDD2-203ENST00000428119 MAP3K1Q13233 1512 aa22.51■■□□□ 1.19
RHBDD2-203ENST00000428119 CDC42BPBQ9Y5S2 1711 aa22.49■■□□□ 1.19
RHBDD2-203ENST00000428119 ZFYVE16Q7Z3T8 1539 aa22.49■■□□□ 1.19
RHBDD2-203ENST00000428119 KDM4FA0A1W2PPD8 638 aa22.48■■□□□ 1.19
RHBDD2-203ENST00000428119 KDM5CP41229 1560 aa22.47■■□□□ 1.19
RHBDD2-203ENST00000428119 CDC42BPAQ5VT25 1732 aa22.47■■□□□ 1.19
RHBDD2-203ENST00000428119 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
RHBDD2-203ENST00000428119 CCNB3Q8WWL7 1395 aa22.45■■□□□ 1.18
RHBDD2-203ENST00000428119 ABCC1P33527 1531 aa22.45■■□□□ 1.18
RHBDD2-203ENST00000428119 KIAA1107Q9UPP5 1409 aa22.43■■□□□ 1.18
RHBDD2-203ENST00000428119 GPATCH8Q9UKJ3 1502 aaKnown RBP22.42■■□□□ 1.18
RHBDD2-203ENST00000428119 SUPT6HQ7KZ85 1726 aaKnown RBP22.42■■□□□ 1.18
RHBDD2-203ENST00000428119 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
RHBDD2-203ENST00000428119 MLH3Q9UHC1 1453 aa22.41■■□□□ 1.18
RHBDD2-203ENST00000428119 HECW2Q9P2P5 1572 aa22.41■■□□□ 1.18
RHBDD2-203ENST00000428119 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
RHBDD2-203ENST00000428119 REREQ9P2R6 1566 aa22.39■■□□□ 1.18
RHBDD2-203ENST00000428119 C9orf84Q5VXU9 1444 aa22.39■■□□□ 1.17
RHBDD2-203ENST00000428119 ATP10AO60312 1499 aa22.38■■□□□ 1.17
RHBDD2-203ENST00000428119 CFDP1Q9UEE9 299 aaPredicted RBP22.37■■□□□ 1.17
RHBDD2-203ENST00000428119 BCORL1Q5H9F3 1711 aa22.37■■□□□ 1.17
RHBDD2-203ENST00000428119 ADAMTSL3P82987 1691 aa22.36■■□□□ 1.17
RHBDD2-203ENST00000428119 APLP2Q06481 763 aa22.33■■□□□ 1.17
RHBDD2-203ENST00000428119 RSPH4AQ5TD94 716 aa22.33■■□□□ 1.17
RHBDD2-203ENST00000428119 SAMD9LQ8IVG5 1584 aa22.33■■□□□ 1.16
RHBDD2-203ENST00000428119 ARID4BQ4LE39 1312 aaPredicted RBP22.32■■□□□ 1.16
RHBDD2-203ENST00000428119 LRRC9Q6ZRR7 1453 aa22.32■■□□□ 1.16
RHBDD2-203ENST00000428119 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
RHBDD2-203ENST00000428119 NCOA2Q15596 1464 aa22.3■■□□□ 1.16
RHBDD2-203ENST00000428119 AGLP35573 1532 aa22.28■■□□□ 1.16
RHBDD2-203ENST00000428119 SYCP2Q9BX26 1530 aa22.28■■□□□ 1.16
RHBDD2-203ENST00000428119 AFAP1Q8N556 730 aa22.27■■□□□ 1.16
RHBDD2-203ENST00000428119 ARHGEF12Q9NZN5 1544 aa22.26■■□□□ 1.15
RHBDD2-203ENST00000428119 DIP2CQ9Y2E4 1556 aa22.26■■□□□ 1.15
RHBDD2-203ENST00000428119 TRAPPC8Q9Y2L5 1435 aa22.26■■□□□ 1.15
RHBDD2-203ENST00000428119 MYT1LQ9UL68 1186 aa22.25■■□□□ 1.15
RHBDD2-203ENST00000428119 ZNF777Q9ULD5 760 aaPredicted RBP22.24■■□□□ 1.15
RHBDD2-203ENST00000428119 SPAG9O60271 1321 aaKnown RBP22.24■■□□□ 1.15
RHBDD2-203ENST00000428119 RTEL1-TNFRSF6BF6WH68 1400 aa22.23■■□□□ 1.15
RHBDD2-203ENST00000428119 MIA2Q96PC5 1412 aa22.23■■□□□ 1.15
RHBDD2-203ENST00000428119 PTPRMP28827 1452 aa22.23■■□□□ 1.15
RHBDD2-203ENST00000428119 KIDINS220Q9ULH0 1771 aa22.22■■□□□ 1.15
RHBDD2-203ENST00000428119 ATP7AQ04656 1500 aa22.21■■□□□ 1.15
RHBDD2-203ENST00000428119 ABCA6Q8N139 1617 aa22.21■■□□□ 1.15
RHBDD2-203ENST00000428119 MADDQ8WXG6 1647 aa22.21■■□□□ 1.15
RHBDD2-203ENST00000428119 INO80Q9ULG1 1556 aaPredicted RBP22.21■■□□□ 1.15
RHBDD2-203ENST00000428119 ARHGEF5Q12774 1597 aa22.19■■□□□ 1.14
RHBDD2-203ENST00000428119 FER1L4A9Z1Z3 1794 aa22.18■■□□□ 1.14
RHBDD2-203ENST00000428119 CCDC141Q6ZP82 1450 aa22.18■■□□□ 1.14
RHBDD2-203ENST00000428119 MBD5Q9P267 1494 aa22.18■■□□□ 1.14
RHBDD2-203ENST00000428119 ADGBQ8N7X0 1667 aa22.17■■□□□ 1.14
RHBDD2-203ENST00000428119 CAMSAP2Q08AD1 1489 aa22.17■■□□□ 1.14
RHBDD2-203ENST00000428119 MYOM3Q5VTT5 1437 aa22.16■■□□□ 1.14
RHBDD2-203ENST00000428119 CNTLNQ9NXG0 1405 aa22.16■■□□□ 1.14
RHBDD2-203ENST00000428119 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.14
RHBDD2-203ENST00000428119 RIMS1Q86UR5 1692 aaKnown RBP22.14■■□□□ 1.14
RHBDD2-203ENST00000428119 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
RHBDD2-203ENST00000428119 PLXNC1O60486 1568 aa22.12■■□□□ 1.13
RHBDD2-203ENST00000428119 SIGLEC1Q9BZZ2 1709 aa22.11■■□□□ 1.13
RHBDD2-203ENST00000428119 FAM135AQ9P2D6 1515 aa22.11■■□□□ 1.13
RHBDD2-203ENST00000428119 ESF1Q9H501 851 aaKnown RBP22.11■■□□□ 1.13
RHBDD2-203ENST00000428119 A2MP01023 1474 aa22.1■■□□□ 1.13
RHBDD2-203ENST00000428119 TSPY4P0CV99 314 aa22.1■■□□□ 1.13
RHBDD2-203ENST00000428119 TSPY10P0CW01 314 aa22.1■■□□□ 1.13
RHBDD2-203ENST00000428119 SETD1BQ9UPS6 1966 aaKnown RBP22.08■■□□□ 1.13
RHBDD2-203ENST00000428119 MAST1Q9Y2H9 1570 aa22.07■■□□□ 1.12
RHBDD2-203ENST00000428119 MROH2AA6NES4 1674 aa22.05■■□□□ 1.12
RHBDD2-203ENST00000428119 KANK4Q5T7N3 995 aaPredicted RBP22.05■■□□□ 1.12
RHBDD2-203ENST00000428119 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
RHBDD2-203ENST00000428119 DHX29Q7Z478 1369 aaKnown RBP22.03■■□□□ 1.12
RHBDD2-203ENST00000428119 ILDR1Q86SU0 546 aaPredicted RBP22.03■■□□□ 1.12
RHBDD2-203ENST00000428119 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
RHBDD2-203ENST00000428119 MLECQ14165 292 aa22.02■■□□□ 1.12
RHBDD2-203ENST00000428119 TCOF1Q13428 1488 aaKnown RBP21.99■■□□□ 1.11
RHBDD2-203ENST00000428119 PTPN23Q9H3S7 1636 aa21.98■■□□□ 1.11
RHBDD2-203ENST00000428119 FGD6Q6ZV73 1430 aa21.98■■□□□ 1.11
RHBDD2-203ENST00000428119 PREX1Q8TCU6 1659 aa21.98■■□□□ 1.11
RHBDD2-203ENST00000428119 NPATQ14207 1427 aa21.97■■□□□ 1.11
RHBDD2-203ENST00000428119 EIF2AK4Q9P2K8 1649 aaKnown RBP21.96■■□□□ 1.11
RHBDD2-203ENST00000428119 LMTK3Q96Q04 1460 aa21.95■■□□□ 1.1
RHBDD2-203ENST00000428119 CROCC2H7BZ55 1655 aa21.93■■□□□ 1.1
RHBDD2-203ENST00000428119 C3P01024 1663 aa21.92■■□□□ 1.1
RHBDD2-203ENST00000428119 DNMT1P26358 1616 aaKnown RBP21.91■■□□□ 1.1
RHBDD2-203ENST00000428119 UHRF1BP1Q6BDS2 1440 aa21.91■■□□□ 1.1
RHBDD2-203ENST00000428119 DUOX2Q9NRD8 1548 aa21.9■■□□□ 1.1
RHBDD2-203ENST00000428119 KDM5DQ9BY66 1539 aa21.88■■□□□ 1.09
RHBDD2-203ENST00000428119 ZC3H13Q5T200 1668 aaKnown RBP21.88■■□□□ 1.09
RHBDD2-203ENST00000428119 DAPK1P53355 1430 aa21.88■■□□□ 1.09
RHBDD2-203ENST00000428119 ERBINQ96RT1 1412 aa21.88■■□□□ 1.09
RHBDD2-203ENST00000428119 RNF17Q9BXT8 1623 aaKnown RBP21.88■■□□□ 1.09
RHBDD2-203ENST00000428119 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
RHBDD2-203ENST00000428119 ANKRD30AQ9BXX3 1397 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms