RNA–Protein interactions for RNA: ENST00000427771.1

TRAK1-205, Transcript of trafficking kinesin protein 1, humanhuman

TSL 3

Gene TRAK1, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-205ENST00000427771 ZMYM4Q5VZL5 1548 aa30.65■■■□□ 2.5
TRAK1-205ENST00000427771 ARHGEF40Q8TER5 1519 aa30.65■■■□□ 2.5
TRAK1-205ENST00000427771 SCAPERQ9BY12 1400 aa30.64■■■□□ 2.5
TRAK1-205ENST00000427771 EFCAB2Q5VUJ9 269 aa30.63■■■□□ 2.49
TRAK1-205ENST00000427771 CDC42BPAQ5VT25 1732 aa30.63■■■□□ 2.49
TRAK1-205ENST00000427771 POGZQ7Z3K3 1410 aa30.63■■■□□ 2.49
TRAK1-205ENST00000427771 ZFYVE16Q7Z3T8 1539 aa30.56■■■□□ 2.48
TRAK1-205ENST00000427771 YEATS2Q9ULM3 1422 aa30.56■■■□□ 2.48
TRAK1-205ENST00000427771 MTUS2Q5JR59 1369 aa30.54■■■□□ 2.48
TRAK1-205ENST00000427771 ABCC1P33527 1531 aa30.52■■■□□ 2.48
TRAK1-205ENST00000427771 EHBP1L1Q8N3D4 1523 aa30.52■■■□□ 2.48
TRAK1-205ENST00000427771 VPS8Q8N3P4 1428 aa30.51■■■□□ 2.47
TRAK1-205ENST00000427771 SIGLEC1Q9BZZ2 1709 aa30.5■■■□□ 2.47
TRAK1-205ENST00000427771 MAGI2Q86UL8 1455 aa30.5■■■□□ 2.47
TRAK1-205ENST00000427771 ITSN2Q9NZM3 1697 aa30.49■■■□□ 2.47
TRAK1-205ENST00000427771 GPATCH8Q9UKJ3 1502 aaKnown RBP30.49■■■□□ 2.47
TRAK1-205ENST00000427771 ZNF518AQ6AHZ1 1483 aa30.49■■■□□ 2.47
TRAK1-205ENST00000427771 KDM5CP41229 1560 aa30.49■■■□□ 2.47
TRAK1-205ENST00000427771 ARHGEF12Q9NZN5 1544 aa30.48■■■□□ 2.47
TRAK1-205ENST00000427771 BCORL1Q5H9F3 1711 aa30.47■■■□□ 2.47
TRAK1-205ENST00000427771 ADAMTSL3P82987 1691 aa30.47■■■□□ 2.47
TRAK1-205ENST00000427771 SAMD9LQ8IVG5 1584 aa30.46■■■□□ 2.47
TRAK1-205ENST00000427771 TIAM1Q13009 1591 aa30.45■■■□□ 2.47
TRAK1-205ENST00000427771 AFAP1Q8N556 730 aa30.43■■■□□ 2.46
TRAK1-205ENST00000427771 ARID4BQ4LE39 1312 aaPredicted RBP30.43■■■□□ 2.46
TRAK1-205ENST00000427771 CCNB3Q8WWL7 1395 aa30.42■■■□□ 2.46
TRAK1-205ENST00000427771 TRAPPC8Q9Y2L5 1435 aa30.42■■■□□ 2.46
TRAK1-205ENST00000427771 HECW2Q9P2P5 1572 aa30.41■■■□□ 2.46
TRAK1-205ENST00000427771 SYCP2Q9BX26 1530 aa30.39■■■□□ 2.46
TRAK1-205ENST00000427771 ZNF777Q9ULD5 760 aaPredicted RBP30.39■■■□□ 2.46
TRAK1-205ENST00000427771 MADDQ8WXG6 1647 aa30.39■■■□□ 2.46
TRAK1-205ENST00000427771 SUPT6HQ7KZ85 1726 aaKnown RBP30.36■■■□□ 2.45
TRAK1-205ENST00000427771 ATP10AO60312 1499 aa30.35■■■□□ 2.45
TRAK1-205ENST00000427771 DIP2CQ9Y2E4 1556 aa30.35■■■□□ 2.45
TRAK1-205ENST00000427771 ABCA6Q8N139 1617 aa30.35■■■□□ 2.45
TRAK1-205ENST00000427771 C9orf84Q5VXU9 1444 aa30.34■■■□□ 2.45
TRAK1-205ENST00000427771 CFDP1Q9UEE9 299 aaPredicted RBP30.34■■■□□ 2.45
TRAK1-205ENST00000427771 NCOA2Q15596 1464 aa30.32■■■□□ 2.44
TRAK1-205ENST00000427771 MLH3Q9UHC1 1453 aa30.31■■■□□ 2.44
TRAK1-205ENST00000427771 KIDINS220Q9ULH0 1771 aa30.3■■■□□ 2.44
TRAK1-205ENST00000427771 PTPRMP28827 1452 aa30.3■■■□□ 2.44
TRAK1-205ENST00000427771 LRRC9Q6ZRR7 1453 aa30.3■■■□□ 2.44
TRAK1-205ENST00000427771 RIMS1Q86UR5 1692 aaKnown RBP30.3■■■□□ 2.44
TRAK1-205ENST00000427771 MYT1LQ9UL68 1186 aa30.29■■■□□ 2.44
TRAK1-205ENST00000427771 HNRNPMP52272 730 aaKnown RBP eCLIP30.27■■■□□ 2.44
TRAK1-205ENST00000427771 PLEKHH2Q8IVE3 1493 aa30.26■■■□□ 2.44
TRAK1-205ENST00000427771 MAP3K1Q13233 1512 aa30.26■■■□□ 2.43
TRAK1-205ENST00000427771 KIAA1107Q9UPP5 1409 aa30.25■■■□□ 2.43
TRAK1-205ENST00000427771 ZNF644Q9H582 1327 aaPredicted RBP30.24■■■□□ 2.43
TRAK1-205ENST00000427771 REREQ9P2R6 1566 aa30.23■■■□□ 2.43
TRAK1-205ENST00000427771 MLECQ14165 292 aa30.22■■■□□ 2.43
TRAK1-205ENST00000427771 FER1L4A9Z1Z3 1794 aa30.22■■■□□ 2.43
TRAK1-205ENST00000427771 KANK4Q5T7N3 995 aaPredicted RBP30.21■■■□□ 2.43
TRAK1-205ENST00000427771 INO80Q9ULG1 1556 aaPredicted RBP30.2■■■□□ 2.42
TRAK1-205ENST00000427771 ATP7AQ04656 1500 aa30.18■■■□□ 2.42
TRAK1-205ENST00000427771 CAMSAP2Q08AD1 1489 aa30.16■■■□□ 2.42
TRAK1-205ENST00000427771 MBD5Q9P267 1494 aa30.16■■■□□ 2.42
TRAK1-205ENST00000427771 SPAG9O60271 1321 aaKnown RBP30.16■■■□□ 2.42
TRAK1-205ENST00000427771 AGLP35573 1532 aa30.12■■■□□ 2.41
TRAK1-205ENST00000427771 PLPPR3Q6T4P5 718 aa30.07■■■□□ 2.4
TRAK1-205ENST00000427771 PLXNC1O60486 1568 aa30.05■■■□□ 2.4
TRAK1-205ENST00000427771 CCDC141Q6ZP82 1450 aa30.05■■■□□ 2.4
TRAK1-205ENST00000427771 APLP2Q06481 763 aa30.03■■■□□ 2.4
TRAK1-205ENST00000427771 MYOM3Q5VTT5 1437 aa30.03■■■□□ 2.4
TRAK1-205ENST00000427771 ADGBQ8N7X0 1667 aa30.02■■■□□ 2.4
TRAK1-205ENST00000427771 A2MP01023 1474 aa30.01■■■□□ 2.4
TRAK1-205ENST00000427771 ARHGEF5Q12774 1597 aa30.01■■■□□ 2.39
TRAK1-205ENST00000427771 RTEL1-TNFRSF6BF6WH68 1400 aa29.97■■■□□ 2.39
TRAK1-205ENST00000427771 LMTK3Q96Q04 1460 aa29.97■■■□□ 2.39
TRAK1-205ENST00000427771 MIA2Q96PC5 1412 aa29.96■■■□□ 2.39
TRAK1-205ENST00000427771 CEBPAP49715 358 aaPredicted RBP29.93■■■□□ 2.38
TRAK1-205ENST00000427771 C3P01024 1663 aa29.92■■■□□ 2.38
TRAK1-205ENST00000427771 RSPH4AQ5TD94 716 aa29.89■■■□□ 2.38
TRAK1-205ENST00000427771 PTPN23Q9H3S7 1636 aa29.88■■■□□ 2.37
TRAK1-205ENST00000427771 MAST1Q9Y2H9 1570 aa29.86■■■□□ 2.37
TRAK1-205ENST00000427771 CLTCQ00610 1675 aaKnown RBP29.85■■■□□ 2.37
TRAK1-205ENST00000427771 PREX1Q8TCU6 1659 aa29.85■■■□□ 2.37
TRAK1-205ENST00000427771 ESF1Q9H501 851 aaKnown RBP29.84■■■□□ 2.37
TRAK1-205ENST00000427771 DHX29Q7Z478 1369 aaKnown RBP29.84■■■□□ 2.37
TRAK1-205ENST00000427771 CNTLNQ9NXG0 1405 aa29.84■■■□□ 2.37
TRAK1-205ENST00000427771 MROH2AA6NES4 1674 aa29.84■■■□□ 2.37
TRAK1-205ENST00000427771 FGD6Q6ZV73 1430 aa29.83■■■□□ 2.37
TRAK1-205ENST00000427771 CROCC2H7BZ55 1655 aa29.82■■■□□ 2.36
TRAK1-205ENST00000427771 TSPY4P0CV99 314 aa29.81■■■□□ 2.36
TRAK1-205ENST00000427771 TSPY10P0CW01 314 aa29.81■■■□□ 2.36
TRAK1-205ENST00000427771 GGT6Q6P531 493 aa29.8■■■□□ 2.36
TRAK1-205ENST00000427771 HSPA2P54652 639 aa29.79■■■□□ 2.36
TRAK1-205ENST00000427771 TCOF1Q13428 1488 aaKnown RBP29.78■■■□□ 2.36
TRAK1-205ENST00000427771 DNMT1P26358 1616 aaKnown RBP29.74■■■□□ 2.35
TRAK1-205ENST00000427771 ABCC5O15440 1437 aa29.74■■■□□ 2.35
TRAK1-205ENST00000427771 KIF3BO15066 747 aa29.73■■■□□ 2.35
TRAK1-205ENST00000427771 SETD1BQ9UPS6 1966 aaKnown RBP29.73■■■□□ 2.35
TRAK1-205ENST00000427771 ZMYM3Q14202 1370 aa29.73■■■□□ 2.35
TRAK1-205ENST00000427771 SHANK2Q9UPX8 1470 aa29.72■■■□□ 2.35
TRAK1-205ENST00000427771 DAPK1P53355 1430 aa29.71■■■□□ 2.35
TRAK1-205ENST00000427771 UHRF1BP1Q6BDS2 1440 aa29.71■■■□□ 2.35
TRAK1-205ENST00000427771 RNF17Q9BXT8 1623 aaKnown RBP29.67■■■□□ 2.34
TRAK1-205ENST00000427771 EIF2AK4Q9P2K8 1649 aaKnown RBP29.66■■■□□ 2.34
TRAK1-205ENST00000427771 KDM5DQ9BY66 1539 aa29.66■■■□□ 2.34
TRAK1-205ENST00000427771 NPATQ14207 1427 aa29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms