RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 ZFYVE16Q7Z3T8 1539 aa21.43■■□□□ 1.02
DEPDC7-203ENST00000427755 MADDQ8WXG6 1647 aa21.42■■□□□ 1.02
DEPDC7-203ENST00000427755 KIF14Q15058 1648 aa21.41■■□□□ 1.02
DEPDC7-203ENST00000427755 CLIP1P30622 1438 aa21.38■■□□□ 1.01
DEPDC7-203ENST00000427755 CASKIN1Q8WXD9 1431 aa21.38■■□□□ 1.01
DEPDC7-203ENST00000427755 SIGLEC1Q9BZZ2 1709 aa21.36■■□□□ 1.01
DEPDC7-203ENST00000427755 PCF11O94913 1555 aaKnown RBP21.34■■□□□ 1.01
DEPDC7-203ENST00000427755 LRRIQ1Q96JM4 1722 aa21.34■■□□□ 1.01
DEPDC7-203ENST00000427755 ATP10AO60312 1499 aa21.33■■□□□ 1.01
DEPDC7-203ENST00000427755 MYO5CQ9NQX4 1742 aa21.33■■□□□ 1.01
DEPDC7-203ENST00000427755 AFAP1Q8N556 730 aa21.33■■□□□ 1.01
DEPDC7-203ENST00000427755 ARHGAP5Q13017 1502 aa21.33■■□□□ 1
DEPDC7-203ENST00000427755 CCDC18Q5T9S5 1454 aa21.32■■□□□ 1
DEPDC7-203ENST00000427755 LMTK3Q96Q04 1460 aa21.32■■□□□ 1
DEPDC7-203ENST00000427755 ZNF518AQ6AHZ1 1483 aa21.32■■□□□ 1
DEPDC7-203ENST00000427755 MLECQ14165 292 aa21.31■■□□□ 1
DEPDC7-203ENST00000427755 RIMS1Q86UR5 1692 aaKnown RBP21.31■■□□□ 1
DEPDC7-203ENST00000427755 C9orf84Q5VXU9 1444 aa21.3■■□□□ 1
DEPDC7-203ENST00000427755 KDM5CP41229 1560 aa21.28■■□□□ 1
DEPDC7-203ENST00000427755 FYCO1Q9BQS8 1478 aa21.28■■□□□ 1
DEPDC7-203ENST00000427755 ARHGEF12Q9NZN5 1544 aa21.25■□□□□ 0.99
DEPDC7-203ENST00000427755 PLPPR3Q6T4P5 718 aa21.24■□□□□ 0.99
DEPDC7-203ENST00000427755 TRAPPC8Q9Y2L5 1435 aa21.23■□□□□ 0.99
DEPDC7-203ENST00000427755 MLH3Q9UHC1 1453 aa21.22■□□□□ 0.99
DEPDC7-203ENST00000427755 ABCC1P33527 1531 aa21.22■□□□□ 0.99
DEPDC7-203ENST00000427755 PREX2Q70Z35 1606 aa21.22■□□□□ 0.99
DEPDC7-203ENST00000427755 CDC42BPBQ9Y5S2 1711 aa21.21■□□□□ 0.99
DEPDC7-203ENST00000427755 HSPA2P54652 639 aa21.2■□□□□ 0.98
DEPDC7-203ENST00000427755 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
DEPDC7-203ENST00000427755 MYT1LQ9UL68 1186 aa21.18■□□□□ 0.98
DEPDC7-203ENST00000427755 REREQ9P2R6 1566 aa21.17■□□□□ 0.98
DEPDC7-203ENST00000427755 FER1L4A9Z1Z3 1794 aa21.16■□□□□ 0.98
DEPDC7-203ENST00000427755 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
DEPDC7-203ENST00000427755 CEBPAP49715 358 aaPredicted RBP21.16■□□□□ 0.98
DEPDC7-203ENST00000427755 ABCA6Q8N139 1617 aa21.14■□□□□ 0.97
DEPDC7-203ENST00000427755 FBXO41Q8TF61 875 aa21.12■□□□□ 0.97
DEPDC7-203ENST00000427755 ZNF777Q9ULD5 760 aaPredicted RBP21.12■□□□□ 0.97
DEPDC7-203ENST00000427755 AGLP35573 1532 aa21.12■□□□□ 0.97
DEPDC7-203ENST00000427755 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
DEPDC7-203ENST00000427755 ITSN2Q9NZM3 1697 aa21.12■□□□□ 0.97
DEPDC7-203ENST00000427755 SAMD9LQ8IVG5 1584 aa21.1■□□□□ 0.97
DEPDC7-203ENST00000427755 HNRNPMP52272 730 aaKnown RBP eCLIP21.08■□□□□ 0.97
DEPDC7-203ENST00000427755 CFDP1Q9UEE9 299 aaPredicted RBP21.08■□□□□ 0.97
DEPDC7-203ENST00000427755 KIAA1107Q9UPP5 1409 aa21.08■□□□□ 0.97
DEPDC7-203ENST00000427755 SYCP2Q9BX26 1530 aa21.08■□□□□ 0.96
DEPDC7-203ENST00000427755 MTUS2Q5JR59 1369 aa21.08■□□□□ 0.96
DEPDC7-203ENST00000427755 KIDINS220Q9ULH0 1771 aa21.07■□□□□ 0.96
DEPDC7-203ENST00000427755 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
DEPDC7-203ENST00000427755 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
DEPDC7-203ENST00000427755 SPAG9O60271 1321 aaKnown RBP21.04■□□□□ 0.96
DEPDC7-203ENST00000427755 PLEKHH2Q8IVE3 1493 aa21.03■□□□□ 0.96
DEPDC7-203ENST00000427755 UHRF1BP1Q6BDS2 1440 aa21.01■□□□□ 0.95
DEPDC7-203ENST00000427755 PREX1Q8TCU6 1659 aa21■□□□□ 0.95
DEPDC7-203ENST00000427755 CNTLNQ9NXG0 1405 aa20.99■□□□□ 0.95
DEPDC7-203ENST00000427755 ESF1Q9H501 851 aaKnown RBP20.99■□□□□ 0.95
DEPDC7-203ENST00000427755 ZNF644Q9H582 1327 aaPredicted RBP20.99■□□□□ 0.95
DEPDC7-203ENST00000427755 ATP7AQ04656 1500 aa20.98■□□□□ 0.95
DEPDC7-203ENST00000427755 EHBP1L1Q8N3D4 1523 aa20.98■□□□□ 0.95
DEPDC7-203ENST00000427755 TIAM1Q13009 1591 aa20.97■□□□□ 0.95
DEPDC7-203ENST00000427755 MBD5Q9P267 1494 aa20.96■□□□□ 0.95
DEPDC7-203ENST00000427755 INO80Q9ULG1 1556 aaPredicted RBP20.96■□□□□ 0.95
DEPDC7-203ENST00000427755 C3P01024 1663 aa20.95■□□□□ 0.94
DEPDC7-203ENST00000427755 A2MP01023 1474 aa20.94■□□□□ 0.94
DEPDC7-203ENST00000427755 PLXNC1O60486 1568 aa20.94■□□□□ 0.94
DEPDC7-203ENST00000427755 CERKQ8TCT0 537 aa20.93■□□□□ 0.94
DEPDC7-203ENST00000427755 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
DEPDC7-203ENST00000427755 ZMYM3Q14202 1370 aa20.92■□□□□ 0.94
DEPDC7-203ENST00000427755 NPATQ14207 1427 aa20.9■□□□□ 0.94
DEPDC7-203ENST00000427755 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
DEPDC7-203ENST00000427755 SETD1BQ9UPS6 1966 aaKnown RBP20.89■□□□□ 0.93
DEPDC7-203ENST00000427755 STRCQ7RTU9 1775 aa20.89■□□□□ 0.93
DEPDC7-203ENST00000427755 NCOA2Q15596 1464 aa20.88■□□□□ 0.93
DEPDC7-203ENST00000427755 RTEL1-TNFRSF6BF6WH68 1400 aa20.88■□□□□ 0.93
DEPDC7-203ENST00000427755 LOC105371045A0A1W2PR82 267 aa20.88■□□□□ 0.93
DEPDC7-203ENST00000427755 GGT6Q6P531 493 aa20.86■□□□□ 0.93
DEPDC7-203ENST00000427755 SUPT6HQ7KZ85 1726 aaKnown RBP20.86■□□□□ 0.93
DEPDC7-203ENST00000427755 PTPRTO14522 1441 aa20.86■□□□□ 0.93
DEPDC7-203ENST00000427755 MROH2AA6NES4 1674 aa20.85■□□□□ 0.93
DEPDC7-203ENST00000427755 PPP6R1Q9UPN7 881 aa20.84■□□□□ 0.93
DEPDC7-203ENST00000427755 NCOA1Q15788 1441 aa20.84■□□□□ 0.93
DEPDC7-203ENST00000427755 VPS8Q8N3P4 1428 aa20.84■□□□□ 0.93
DEPDC7-203ENST00000427755 DHX29Q7Z478 1369 aaKnown RBP20.84■□□□□ 0.93
DEPDC7-203ENST00000427755 PTPRKQ15262 1439 aa20.83■□□□□ 0.93
DEPDC7-203ENST00000427755 CAMSAP2Q08AD1 1489 aa20.82■□□□□ 0.92
DEPDC7-203ENST00000427755 CCDC141Q6ZP82 1450 aa20.81■□□□□ 0.92
DEPDC7-203ENST00000427755 RSPH4AQ5TD94 716 aa20.8■□□□□ 0.92
DEPDC7-203ENST00000427755 LRRC9Q6ZRR7 1453 aa20.79■□□□□ 0.92
DEPDC7-203ENST00000427755 ADGBQ8N7X0 1667 aa20.79■□□□□ 0.92
DEPDC7-203ENST00000427755 CLTCQ00610 1675 aaKnown RBP20.78■□□□□ 0.92
DEPDC7-203ENST00000427755 CAMSAP1Q5T5Y3 1602 aa20.76■□□□□ 0.91
DEPDC7-203ENST00000427755 KIF3BO15066 747 aa20.75■□□□□ 0.91
DEPDC7-203ENST00000427755 KANK4Q5T7N3 995 aaPredicted RBP20.75■□□□□ 0.91
DEPDC7-203ENST00000427755 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
DEPDC7-203ENST00000427755 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
DEPDC7-203ENST00000427755 ARHGEF5Q12774 1597 aa20.72■□□□□ 0.91
DEPDC7-203ENST00000427755 LTBP4Q8N2S1 1624 aa20.72■□□□□ 0.91
DEPDC7-203ENST00000427755 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
DEPDC7-203ENST00000427755 PLA2R1Q13018 1463 aa20.71■□□□□ 0.91
DEPDC7-203ENST00000427755 CEP170BQ9Y4F5 1589 aaPredicted RBP20.71■□□□□ 0.91
DEPDC7-203ENST00000427755 TSPY4P0CV99 314 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms