RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PREX2Q70Z35 1606 aa30.89■■■□□ 2.54
COL9A2-204ENST00000427563 SCAPERQ9BY12 1400 aa30.89■■■□□ 2.53
COL9A2-204ENST00000427563 ARHGAP5Q13017 1502 aa30.88■■■□□ 2.53
COL9A2-204ENST00000427563 CDC42BPAQ5VT25 1732 aa30.87■■■□□ 2.53
COL9A2-204ENST00000427563 POGZQ7Z3K3 1410 aa30.87■■■□□ 2.53
COL9A2-204ENST00000427563 EFCAB2Q5VUJ9 269 aa30.86■■■□□ 2.53
COL9A2-204ENST00000427563 SIGLEC1Q9BZZ2 1709 aa30.82■■■□□ 2.52
COL9A2-204ENST00000427563 YEATS2Q9ULM3 1422 aa30.81■■■□□ 2.52
COL9A2-204ENST00000427563 ZFYVE16Q7Z3T8 1539 aa30.78■■■□□ 2.52
COL9A2-204ENST00000427563 ADAMTSL3P82987 1691 aa30.78■■■□□ 2.52
COL9A2-204ENST00000427563 ARHGEF12Q9NZN5 1544 aa30.77■■■□□ 2.52
COL9A2-204ENST00000427563 ABCC1P33527 1531 aa30.76■■■□□ 2.51
COL9A2-204ENST00000427563 MAGI2Q86UL8 1455 aa30.76■■■□□ 2.51
COL9A2-204ENST00000427563 BCORL1Q5H9F3 1711 aa30.76■■■□□ 2.51
COL9A2-204ENST00000427563 GPATCH8Q9UKJ3 1502 aaKnown RBP30.74■■■□□ 2.51
COL9A2-204ENST00000427563 KDM5CP41229 1560 aa30.74■■■□□ 2.51
COL9A2-204ENST00000427563 ITSN2Q9NZM3 1697 aa30.73■■■□□ 2.51
COL9A2-204ENST00000427563 ZNF518AQ6AHZ1 1483 aa30.7■■■□□ 2.51
COL9A2-204ENST00000427563 MTUS2Q5JR59 1369 aa30.7■■■□□ 2.51
COL9A2-204ENST00000427563 SAMD9LQ8IVG5 1584 aa30.7■■■□□ 2.5
COL9A2-204ENST00000427563 EHBP1L1Q8N3D4 1523 aa30.69■■■□□ 2.5
COL9A2-204ENST00000427563 AFAP1Q8N556 730 aa30.69■■■□□ 2.5
COL9A2-204ENST00000427563 VPS8Q8N3P4 1428 aa30.69■■■□□ 2.5
COL9A2-204ENST00000427563 TRAPPC8Q9Y2L5 1435 aa30.68■■■□□ 2.5
COL9A2-204ENST00000427563 TIAM1Q13009 1591 aa30.66■■■□□ 2.5
COL9A2-204ENST00000427563 MADDQ8WXG6 1647 aa30.65■■■□□ 2.5
COL9A2-204ENST00000427563 HECW2Q9P2P5 1572 aa30.63■■■□□ 2.49
COL9A2-204ENST00000427563 ARID4BQ4LE39 1312 aaPredicted RBP30.62■■■□□ 2.49
COL9A2-204ENST00000427563 ATP10AO60312 1499 aa30.61■■■□□ 2.49
COL9A2-204ENST00000427563 CCNB3Q8WWL7 1395 aa30.6■■■□□ 2.49
COL9A2-204ENST00000427563 DIP2CQ9Y2E4 1556 aa30.6■■■□□ 2.49
COL9A2-204ENST00000427563 ABCA6Q8N139 1617 aa30.59■■■□□ 2.49
COL9A2-204ENST00000427563 SYCP2Q9BX26 1530 aa30.59■■■□□ 2.49
COL9A2-204ENST00000427563 PTPRMP28827 1452 aa30.58■■■□□ 2.49
COL9A2-204ENST00000427563 MLH3Q9UHC1 1453 aa30.58■■■□□ 2.49
COL9A2-204ENST00000427563 C9orf84Q5VXU9 1444 aa30.57■■■□□ 2.48
COL9A2-204ENST00000427563 KIDINS220Q9ULH0 1771 aa30.56■■■□□ 2.48
COL9A2-204ENST00000427563 ZNF777Q9ULD5 760 aaPredicted RBP30.56■■■□□ 2.48
COL9A2-204ENST00000427563 RIMS1Q86UR5 1692 aaKnown RBP30.55■■■□□ 2.48
COL9A2-204ENST00000427563 SUPT6HQ7KZ85 1726 aaKnown RBP30.53■■■□□ 2.48
COL9A2-204ENST00000427563 CFDP1Q9UEE9 299 aaPredicted RBP30.53■■■□□ 2.48
COL9A2-204ENST00000427563 NCOA2Q15596 1464 aa30.52■■■□□ 2.48
COL9A2-204ENST00000427563 REREQ9P2R6 1566 aa30.5■■■□□ 2.47
COL9A2-204ENST00000427563 KIAA1107Q9UPP5 1409 aa30.5■■■□□ 2.47
COL9A2-204ENST00000427563 HNRNPMP52272 730 aaKnown RBP eCLIP30.5■■■□□ 2.47
COL9A2-204ENST00000427563 LRRC9Q6ZRR7 1453 aa30.5■■■□□ 2.47
COL9A2-204ENST00000427563 ZNF644Q9H582 1327 aaPredicted RBP30.48■■■□□ 2.47
COL9A2-204ENST00000427563 MAP3K1Q13233 1512 aa30.47■■■□□ 2.47
COL9A2-204ENST00000427563 FER1L4A9Z1Z3 1794 aa30.46■■■□□ 2.47
COL9A2-204ENST00000427563 PLEKHH2Q8IVE3 1493 aa30.46■■■□□ 2.47
COL9A2-204ENST00000427563 MLECQ14165 292 aa30.44■■■□□ 2.46
COL9A2-204ENST00000427563 KANK4Q5T7N3 995 aaPredicted RBP30.44■■■□□ 2.46
COL9A2-204ENST00000427563 MYT1LQ9UL68 1186 aa30.43■■■□□ 2.46
COL9A2-204ENST00000427563 INO80Q9ULG1 1556 aaPredicted RBP30.43■■■□□ 2.46
COL9A2-204ENST00000427563 MBD5Q9P267 1494 aa30.43■■■□□ 2.46
COL9A2-204ENST00000427563 AGLP35573 1532 aa30.39■■■□□ 2.46
COL9A2-204ENST00000427563 ATP7AQ04656 1500 aa30.39■■■□□ 2.46
COL9A2-204ENST00000427563 SPAG9O60271 1321 aaKnown RBP30.37■■■□□ 2.45
COL9A2-204ENST00000427563 CAMSAP2Q08AD1 1489 aa30.35■■■□□ 2.45
COL9A2-204ENST00000427563 PLXNC1O60486 1568 aa30.3■■■□□ 2.44
COL9A2-204ENST00000427563 LMTK3Q96Q04 1460 aa30.26■■■□□ 2.44
COL9A2-204ENST00000427563 PLPPR3Q6T4P5 718 aa30.25■■■□□ 2.43
COL9A2-204ENST00000427563 CCDC141Q6ZP82 1450 aa30.25■■■□□ 2.43
COL9A2-204ENST00000427563 ADGBQ8N7X0 1667 aa30.24■■■□□ 2.43
COL9A2-204ENST00000427563 A2MP01023 1474 aa30.24■■■□□ 2.43
COL9A2-204ENST00000427563 ARHGEF5Q12774 1597 aa30.23■■■□□ 2.43
COL9A2-204ENST00000427563 RTEL1-TNFRSF6BF6WH68 1400 aa30.22■■■□□ 2.43
COL9A2-204ENST00000427563 MYOM3Q5VTT5 1437 aa30.22■■■□□ 2.43
COL9A2-204ENST00000427563 CEBPAP49715 358 aaPredicted RBP30.2■■■□□ 2.43
COL9A2-204ENST00000427563 C3P01024 1663 aa30.2■■■□□ 2.42
COL9A2-204ENST00000427563 MIA2Q96PC5 1412 aa30.16■■■□□ 2.42
COL9A2-204ENST00000427563 APLP2Q06481 763 aa30.11■■■□□ 2.41
COL9A2-204ENST00000427563 RSPH4AQ5TD94 716 aa30.11■■■□□ 2.41
COL9A2-204ENST00000427563 MAST1Q9Y2H9 1570 aa30.1■■■□□ 2.41
COL9A2-204ENST00000427563 PREX1Q8TCU6 1659 aa30.1■■■□□ 2.41
COL9A2-204ENST00000427563 MROH2AA6NES4 1674 aa30.09■■■□□ 2.41
COL9A2-204ENST00000427563 DHX29Q7Z478 1369 aaKnown RBP30.09■■■□□ 2.41
COL9A2-204ENST00000427563 CLTCQ00610 1675 aaKnown RBP30.07■■■□□ 2.41
COL9A2-204ENST00000427563 PTPN23Q9H3S7 1636 aa30.07■■■□□ 2.4
COL9A2-204ENST00000427563 CNTLNQ9NXG0 1405 aa30.06■■■□□ 2.4
COL9A2-204ENST00000427563 HSPA2P54652 639 aa30.06■■■□□ 2.4
COL9A2-204ENST00000427563 SETD1BQ9UPS6 1966 aaKnown RBP30.04■■■□□ 2.4
COL9A2-204ENST00000427563 FGD6Q6ZV73 1430 aa30.02■■■□□ 2.4
COL9A2-204ENST00000427563 GGT6Q6P531 493 aa30.01■■■□□ 2.39
COL9A2-204ENST00000427563 CROCC2H7BZ55 1655 aa30.01■■■□□ 2.39
COL9A2-204ENST00000427563 TCOF1Q13428 1488 aaKnown RBP30■■■□□ 2.39
COL9A2-204ENST00000427563 TSPY4P0CV99 314 aa30■■■□□ 2.39
COL9A2-204ENST00000427563 TSPY10P0CW01 314 aa30■■■□□ 2.39
COL9A2-204ENST00000427563 ESF1Q9H501 851 aaKnown RBP30■■■□□ 2.39
COL9A2-204ENST00000427563 ZMYM3Q14202 1370 aa29.99■■■□□ 2.39
COL9A2-204ENST00000427563 ABCC5O15440 1437 aa29.97■■■□□ 2.39
COL9A2-204ENST00000427563 DNMT1P26358 1616 aaKnown RBP29.94■■■□□ 2.38
COL9A2-204ENST00000427563 KIF3BO15066 747 aa29.94■■■□□ 2.38
COL9A2-204ENST00000427563 UHRF1BP1Q6BDS2 1440 aa29.93■■■□□ 2.38
COL9A2-204ENST00000427563 SHANK2Q9UPX8 1470 aa29.91■■■□□ 2.38
COL9A2-204ENST00000427563 DAPK1P53355 1430 aa29.9■■■□□ 2.38
COL9A2-204ENST00000427563 NPATQ14207 1427 aa29.9■■■□□ 2.38
COL9A2-204ENST00000427563 PPP6R1Q9UPN7 881 aa29.9■■■□□ 2.38
COL9A2-204ENST00000427563 RNF17Q9BXT8 1623 aaKnown RBP29.89■■■□□ 2.38
COL9A2-204ENST00000427563 PTPRKQ15262 1439 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms