RNA–Protein interactions for RNA: ENST00000427463.5

PCGF3-204, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-204ENST00000427463 PTPRMP28827 1452 aa34.37■■■■□ 3.09
PCGF3-204ENST00000427463 CLIP1P30622 1438 aa34.37■■■■□ 3.09
PCGF3-204ENST00000427463 SCAPERQ9BY12 1400 aa34.36■■■■□ 3.09
PCGF3-204ENST00000427463 SIGLEC1Q9BZZ2 1709 aa34.35■■■■□ 3.09
PCGF3-204ENST00000427463 CCDC18Q5T9S5 1454 aa34.35■■■■□ 3.09
PCGF3-204ENST00000427463 MAGI2Q86UL8 1455 aa34.34■■■■□ 3.09
PCGF3-204ENST00000427463 ARID4BQ4LE39 1312 aaPredicted RBP34.33■■■■□ 3.09
PCGF3-204ENST00000427463 YEATS2Q9ULM3 1422 aa34.33■■■■□ 3.09
PCGF3-204ENST00000427463 CDC42BPBQ9Y5S2 1711 aa34.3■■■■□ 3.08
PCGF3-204ENST00000427463 ARHGAP5Q13017 1502 aa34.3■■■■□ 3.08
PCGF3-204ENST00000427463 FYCO1Q9BQS8 1478 aa34.29■■■■□ 3.08
PCGF3-204ENST00000427463 EFCAB2Q5VUJ9 269 aa34.29■■■■□ 3.08
PCGF3-204ENST00000427463 RIMS1Q86UR5 1692 aaKnown RBP34.26■■■■□ 3.08
PCGF3-204ENST00000427463 PREX2Q70Z35 1606 aa34.25■■■■□ 3.07
PCGF3-204ENST00000427463 ZNF518AQ6AHZ1 1483 aa34.2■■■■□ 3.06
PCGF3-204ENST00000427463 KDM5CP41229 1560 aa34.19■■■■□ 3.06
PCGF3-204ENST00000427463 CDC42BPAQ5VT25 1732 aa34.18■■■■□ 3.06
PCGF3-204ENST00000427463 ATP10AO60312 1499 aa34.14■■■■□ 3.06
PCGF3-204ENST00000427463 FER1L4A9Z1Z3 1794 aa34.14■■■■□ 3.06
PCGF3-204ENST00000427463 ABCC1P33527 1531 aa34.13■■■■□ 3.05
PCGF3-204ENST00000427463 C9orf84Q5VXU9 1444 aa34.13■■■■□ 3.05
PCGF3-204ENST00000427463 ITSN2Q9NZM3 1697 aa34.11■■■■□ 3.05
PCGF3-204ENST00000427463 AFAP1Q8N556 730 aa34.08■■■■□ 3.05
PCGF3-204ENST00000427463 ARHGEF12Q9NZN5 1544 aa34.06■■■■□ 3.04
PCGF3-204ENST00000427463 DIP2CQ9Y2E4 1556 aa34.06■■■■□ 3.04
PCGF3-204ENST00000427463 LMTK3Q96Q04 1460 aa34.04■■■■□ 3.04
PCGF3-204ENST00000427463 ABCA6Q8N139 1617 aa34.03■■■■□ 3.04
PCGF3-204ENST00000427463 MLECQ14165 292 aa34.02■■■■□ 3.04
PCGF3-204ENST00000427463 MLH3Q9UHC1 1453 aa34.01■■■■□ 3.04
PCGF3-204ENST00000427463 TRAPPC8Q9Y2L5 1435 aa34.01■■■■□ 3.03
PCGF3-204ENST00000427463 REREQ9P2R6 1566 aa34■■■■□ 3.03
PCGF3-204ENST00000427463 SAMD9LQ8IVG5 1584 aa33.98■■■■□ 3.03
PCGF3-204ENST00000427463 GPATCH8Q9UKJ3 1502 aaKnown RBP33.97■■■■□ 3.03
PCGF3-204ENST00000427463 CEP162Q5TB80 1403 aa33.96■■■■□ 3.03
PCGF3-204ENST00000427463 KIDINS220Q9ULH0 1771 aa33.95■■■■□ 3.03
PCGF3-204ENST00000427463 MYT1LQ9UL68 1186 aa33.92■■■■□ 3.02
PCGF3-204ENST00000427463 SYCP2Q9BX26 1530 aa33.91■■■■□ 3.02
PCGF3-204ENST00000427463 PLPPR3Q6T4P5 718 aa33.91■■■■□ 3.02
PCGF3-204ENST00000427463 ILDR1Q86SU0 546 aaPredicted RBP33.91■■■■□ 3.02
PCGF3-204ENST00000427463 MTUS2Q5JR59 1369 aa33.88■■■■□ 3.01
PCGF3-204ENST00000427463 AGLP35573 1532 aa33.86■■■■□ 3.01
PCGF3-204ENST00000427463 ZNF777Q9ULD5 760 aaPredicted RBP33.85■■■■□ 3.01
PCGF3-204ENST00000427463 EHBP1L1Q8N3D4 1523 aa33.84■■■■□ 3.01
PCGF3-204ENST00000427463 CCNB3Q8WWL7 1395 aa33.83■■■■□ 3.01
PCGF3-204ENST00000427463 TIAM1Q13009 1591 aa33.81■■■■□ 3
PCGF3-204ENST00000427463 PREX1Q8TCU6 1659 aa33.81■■■■□ 3
PCGF3-204ENST00000427463 PLEKHH2Q8IVE3 1493 aa33.8■■■■□ 3
PCGF3-204ENST00000427463 KIAA1107Q9UPP5 1409 aa33.79■■■■□ 3
PCGF3-204ENST00000427463 CFDP1Q9UEE9 299 aaPredicted RBP33.78■■■■□ 3
PCGF3-204ENST00000427463 HSPA2P54652 639 aa33.77■■■■□ 3
PCGF3-204ENST00000427463 INO80Q9ULG1 1556 aaPredicted RBP33.77■■■■□ 3
PCGF3-204ENST00000427463 C3P01024 1663 aa33.75■■■□□ 2.99
PCGF3-204ENST00000427463 HNRNPMP52272 730 aaKnown RBP eCLIP33.75■■■□□ 2.994e-7■■■■■ 41.2
PCGF3-204ENST00000427463 ATP7AQ04656 1500 aa33.74■■■□□ 2.99
PCGF3-204ENST00000427463 SETD1BQ9UPS6 1966 aaKnown RBP33.73■■■□□ 2.99
PCGF3-204ENST00000427463 CEBPAP49715 358 aaPredicted RBP33.73■■■□□ 2.99
PCGF3-204ENST00000427463 SPAG9O60271 1321 aaKnown RBP33.72■■■□□ 2.99
PCGF3-204ENST00000427463 SUPT6HQ7KZ85 1726 aaKnown RBP33.7■■■□□ 2.98
PCGF3-204ENST00000427463 PLXNC1O60486 1568 aa33.67■■■□□ 2.98
PCGF3-204ENST00000427463 ZNF644Q9H582 1327 aaPredicted RBP33.63■■■□□ 2.97
PCGF3-204ENST00000427463 LOC105371045A0A1W2PR82 267 aa33.62■■■□□ 2.97
PCGF3-204ENST00000427463 MBD5Q9P267 1494 aa33.62■■■□□ 2.97
PCGF3-204ENST00000427463 NCOA2Q15596 1464 aa33.61■■■□□ 2.97
PCGF3-204ENST00000427463 MROH2AA6NES4 1674 aa33.61■■■□□ 2.97
PCGF3-204ENST00000427463 ADGBQ8N7X0 1667 aa33.61■■■□□ 2.97
PCGF3-204ENST00000427463 CNTLNQ9NXG0 1405 aa33.61■■■□□ 2.97
PCGF3-204ENST00000427463 VPS8Q8N3P4 1428 aa33.6■■■□□ 2.97
PCGF3-204ENST00000427463 A2MP01023 1474 aa33.59■■■□□ 2.97
PCGF3-204ENST00000427463 UHRF1BP1Q6BDS2 1440 aa33.59■■■□□ 2.97
PCGF3-204ENST00000427463 ESF1Q9H501 851 aaKnown RBP33.58■■■□□ 2.97
PCGF3-204ENST00000427463 STRCQ7RTU9 1775 aa33.55■■■□□ 2.96
PCGF3-204ENST00000427463 CLTCQ00610 1675 aaKnown RBP33.52■■■□□ 2.96
PCGF3-204ENST00000427463 CAMSAP2Q08AD1 1489 aa33.51■■■□□ 2.96
PCGF3-204ENST00000427463 FBXO41Q8TF61 875 aa33.51■■■□□ 2.95
PCGF3-204ENST00000427463 RTEL1-TNFRSF6BF6WH68 1400 aa33.49■■■□□ 2.95
PCGF3-204ENST00000427463 LRRC9Q6ZRR7 1453 aa33.49■■■□□ 2.95
PCGF3-204ENST00000427463 CCDC141Q6ZP82 1450 aa33.47■■■□□ 2.95
PCGF3-204ENST00000427463 NPATQ14207 1427 aa33.44■■■□□ 2.94
PCGF3-204ENST00000427463 MAP3K1Q13233 1512 aa33.43■■■□□ 2.94
PCGF3-204ENST00000427463 ZMYM3Q14202 1370 aa33.43■■■□□ 2.94
PCGF3-204ENST00000427463 ARHGEF5Q12774 1597 aa33.41■■■□□ 2.94
PCGF3-204ENST00000427463 GGT6Q6P531 493 aa33.37■■■□□ 2.93
PCGF3-204ENST00000427463 DHX29Q7Z478 1369 aaKnown RBP33.36■■■□□ 2.93
PCGF3-204ENST00000427463 RSPH4AQ5TD94 716 aa33.34■■■□□ 2.93
PCGF3-204ENST00000427463 MYO3AQ8NEV4 1616 aa33.34■■■□□ 2.93
PCGF3-204ENST00000427463 ZNF142P52746 1687 aaPredicted RBP33.33■■■□□ 2.93
PCGF3-204ENST00000427463 KANK4Q5T7N3 995 aaPredicted RBP33.32■■■□□ 2.92
PCGF3-204ENST00000427463 DMRT2Q9Y5R5 561 aa33.32■■■□□ 2.92
PCGF3-204ENST00000427463 PTPRKQ15262 1439 aa33.31■■■□□ 2.92
PCGF3-204ENST00000427463 PPP6R1Q9UPN7 881 aa33.31■■■□□ 2.92
PCGF3-204ENST00000427463 NCOA1Q15788 1441 aa33.29■■■□□ 2.92
PCGF3-204ENST00000427463 CERKQ8TCT0 537 aa33.28■■■□□ 2.92
PCGF3-204ENST00000427463 CAMSAP1Q5T5Y3 1602 aa33.27■■■□□ 2.92
PCGF3-204ENST00000427463 PTPRTO14522 1441 aa33.27■■■□□ 2.92
PCGF3-204ENST00000427463 MAST1Q9Y2H9 1570 aa33.26■■■□□ 2.91
PCGF3-204ENST00000427463 MYOM3Q5VTT5 1437 aa33.25■■■□□ 2.91
PCGF3-204ENST00000427463 CEP170BQ9Y4F5 1589 aaPredicted RBP33.24■■■□□ 2.91
PCGF3-204ENST00000427463 FAM135AQ9P2D6 1515 aa33.23■■■□□ 2.91
PCGF3-204ENST00000427463 MIA2Q96PC5 1412 aa33.23■■■□□ 2.91
PCGF3-204ENST00000427463 KIF3BO15066 747 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 285.8 ms