RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 EFCAB2Q5VUJ9 269 aa16.42■□□□□ 0.22
COMMD1-202ENST00000427417 SCAPERQ9BY12 1400 aa16.42■□□□□ 0.22
COMMD1-202ENST00000427417 BCORL1Q5H9F3 1711 aa16.42■□□□□ 0.22
COMMD1-202ENST00000427417 ZMYM4Q5VZL5 1548 aa16.41■□□□□ 0.22
COMMD1-202ENST00000427417 SIGLEC1Q9BZZ2 1709 aa16.41■□□□□ 0.22
COMMD1-202ENST00000427417 MADDQ8WXG6 1647 aa16.41■□□□□ 0.22
COMMD1-202ENST00000427417 ZFYVE16Q7Z3T8 1539 aa16.4■□□□□ 0.22
COMMD1-202ENST00000427417 POGZQ7Z3K3 1410 aa16.39■□□□□ 0.21
COMMD1-202ENST00000427417 PTPRMP28827 1452 aa16.39■□□□□ 0.21
COMMD1-202ENST00000427417 ARHGAP5Q13017 1502 aa16.39■□□□□ 0.21
COMMD1-202ENST00000427417 MAGI2Q86UL8 1455 aa16.38■□□□□ 0.21
COMMD1-202ENST00000427417 CDC42BPBQ9Y5S2 1711 aa16.36■□□□□ 0.21
COMMD1-202ENST00000427417 RIMS1Q86UR5 1692 aaKnown RBP16.35■□□□□ 0.21
COMMD1-202ENST00000427417 MLECQ14165 292 aa16.33■□□□□ 0.2
COMMD1-202ENST00000427417 CEP162Q5TB80 1403 aa16.33■□□□□ 0.2
COMMD1-202ENST00000427417 PREX2Q70Z35 1606 aa16.33■□□□□ 0.2
COMMD1-202ENST00000427417 ZNF518AQ6AHZ1 1483 aa16.32■□□□□ 0.2
COMMD1-202ENST00000427417 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
COMMD1-202ENST00000427417 AFAP1Q8N556 730 aa16.31■□□□□ 0.2
COMMD1-202ENST00000427417 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
COMMD1-202ENST00000427417 KDM5CP41229 1560 aa16.29■□□□□ 0.2
COMMD1-202ENST00000427417 ARHGEF12Q9NZN5 1544 aa16.29■□□□□ 0.2
COMMD1-202ENST00000427417 ABCC1P33527 1531 aa16.28■□□□□ 0.2
COMMD1-202ENST00000427417 ATP10AO60312 1499 aa16.28■□□□□ 0.2
COMMD1-202ENST00000427417 C9orf84Q5VXU9 1444 aa16.28■□□□□ 0.2
COMMD1-202ENST00000427417 TRAPPC8Q9Y2L5 1435 aa16.28■□□□□ 0.2
COMMD1-202ENST00000427417 MTUS2Q5JR59 1369 aa16.27■□□□□ 0.2
COMMD1-202ENST00000427417 MYT1LQ9UL68 1186 aa16.27■□□□□ 0.2
COMMD1-202ENST00000427417 ITSN2Q9NZM3 1697 aa16.27■□□□□ 0.19
COMMD1-202ENST00000427417 FER1L4A9Z1Z3 1794 aa16.26■□□□□ 0.19
COMMD1-202ENST00000427417 ABCA6Q8N139 1617 aa16.25■□□□□ 0.19
COMMD1-202ENST00000427417 DIP2CQ9Y2E4 1556 aa16.25■□□□□ 0.19
COMMD1-202ENST00000427417 ZNF777Q9ULD5 760 aaPredicted RBP16.24■□□□□ 0.19
COMMD1-202ENST00000427417 SAMD9LQ8IVG5 1584 aa16.23■□□□□ 0.19
COMMD1-202ENST00000427417 GPATCH8Q9UKJ3 1502 aaKnown RBP16.23■□□□□ 0.19
COMMD1-202ENST00000427417 CCNB3Q8WWL7 1395 aa16.23■□□□□ 0.19
COMMD1-202ENST00000427417 LMTK3Q96Q04 1460 aa16.22■□□□□ 0.19
COMMD1-202ENST00000427417 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
COMMD1-202ENST00000427417 EHBP1L1Q8N3D4 1523 aa16.21■□□□□ 0.19
COMMD1-202ENST00000427417 SYCP2Q9BX26 1530 aa16.21■□□□□ 0.19
COMMD1-202ENST00000427417 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
COMMD1-202ENST00000427417 CFDP1Q9UEE9 299 aaPredicted RBP16.21■□□□□ 0.19
COMMD1-202ENST00000427417 KIDINS220Q9ULH0 1771 aa16.19■□□□□ 0.18
COMMD1-202ENST00000427417 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
COMMD1-202ENST00000427417 ILDR1Q86SU0 546 aaPredicted RBP16.19■□□□□ 0.18
COMMD1-202ENST00000427417 HSPA2P54652 639 aa16.18■□□□□ 0.18
COMMD1-202ENST00000427417 KIAA1107Q9UPP5 1409 aa16.18■□□□□ 0.18
COMMD1-202ENST00000427417 REREQ9P2R6 1566 aa16.17■□□□□ 0.18
COMMD1-202ENST00000427417 CEBPAP49715 358 aaPredicted RBP16.17■□□□□ 0.18
COMMD1-202ENST00000427417 HNRNPMP52272 730 aaKnown RBP eCLIP16.17■□□□□ 0.18
COMMD1-202ENST00000427417 VPS8Q8N3P4 1428 aa16.17■□□□□ 0.18
COMMD1-202ENST00000427417 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
COMMD1-202ENST00000427417 SPAG9O60271 1321 aaKnown RBP16.14■□□□□ 0.17
COMMD1-202ENST00000427417 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
COMMD1-202ENST00000427417 AGLP35573 1532 aa16.12■□□□□ 0.17
COMMD1-202ENST00000427417 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
COMMD1-202ENST00000427417 ATP7AQ04656 1500 aa16.1■□□□□ 0.17
COMMD1-202ENST00000427417 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
COMMD1-202ENST00000427417 INO80Q9ULG1 1556 aaPredicted RBP16.09■□□□□ 0.17
COMMD1-202ENST00000427417 ESF1Q9H501 851 aaKnown RBP16.09■□□□□ 0.17
COMMD1-202ENST00000427417 C3P01024 1663 aa16.08■□□□□ 0.17
COMMD1-202ENST00000427417 PREX1Q8TCU6 1659 aa16.08■□□□□ 0.16
COMMD1-202ENST00000427417 LRRC9Q6ZRR7 1453 aa16.07■□□□□ 0.16
COMMD1-202ENST00000427417 MAP3K1Q13233 1512 aa16.07■□□□□ 0.16
COMMD1-202ENST00000427417 MBD5Q9P267 1494 aa16.05■□□□□ 0.16
COMMD1-202ENST00000427417 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
COMMD1-202ENST00000427417 CNTLNQ9NXG0 1405 aa16.04■□□□□ 0.16
COMMD1-202ENST00000427417 PLXNC1O60486 1568 aa16.04■□□□□ 0.16
COMMD1-202ENST00000427417 A2MP01023 1474 aa16.03■□□□□ 0.16
COMMD1-202ENST00000427417 RTEL1-TNFRSF6BF6WH68 1400 aa16.03■□□□□ 0.16
COMMD1-202ENST00000427417 APLP2Q06481 763 aa16.03■□□□□ 0.16
COMMD1-202ENST00000427417 CAMSAP2Q08AD1 1489 aa16.03■□□□□ 0.16
COMMD1-202ENST00000427417 UHRF1BP1Q6BDS2 1440 aa16.02■□□□□ 0.15
COMMD1-202ENST00000427417 CCDC141Q6ZP82 1450 aa16.01■□□□□ 0.15
COMMD1-202ENST00000427417 SETD1BQ9UPS6 1966 aaKnown RBP16■□□□□ 0.15
COMMD1-202ENST00000427417 CLTCQ00610 1675 aaKnown RBP16■□□□□ 0.15
COMMD1-202ENST00000427417 ADGBQ8N7X0 1667 aa15.99■□□□□ 0.15
COMMD1-202ENST00000427417 KANK4Q5T7N3 995 aaPredicted RBP15.99■□□□□ 0.15
COMMD1-202ENST00000427417 GGT6Q6P531 493 aa15.99■□□□□ 0.15
COMMD1-202ENST00000427417 TSPY4P0CV99 314 aa15.98■□□□□ 0.15
COMMD1-202ENST00000427417 TSPY10P0CW01 314 aa15.98■□□□□ 0.15
COMMD1-202ENST00000427417 MROH2AA6NES4 1674 aa15.98■□□□□ 0.15
COMMD1-202ENST00000427417 STRCQ7RTU9 1775 aa15.98■□□□□ 0.15
COMMD1-202ENST00000427417 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
COMMD1-202ENST00000427417 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
COMMD1-202ENST00000427417 MIA2Q96PC5 1412 aa15.96■□□□□ 0.15
COMMD1-202ENST00000427417 ZMYM3Q14202 1370 aa15.96■□□□□ 0.15
COMMD1-202ENST00000427417 DHX29Q7Z478 1369 aaKnown RBP15.96■□□□□ 0.15
COMMD1-202ENST00000427417 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
COMMD1-202ENST00000427417 FBXO41Q8TF61 875 aa15.95■□□□□ 0.14
COMMD1-202ENST00000427417 NPATQ14207 1427 aa15.93■□□□□ 0.14
COMMD1-202ENST00000427417 KIF3BO15066 747 aa15.9■□□□□ 0.14
COMMD1-202ENST00000427417 PTPRKQ15262 1439 aa15.89■□□□□ 0.13
COMMD1-202ENST00000427417 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
COMMD1-202ENST00000427417 MYO3AQ8NEV4 1616 aa15.89■□□□□ 0.13
COMMD1-202ENST00000427417 MAST1Q9Y2H9 1570 aa15.88■□□□□ 0.13
COMMD1-202ENST00000427417 CAMSAP1Q5T5Y3 1602 aa15.87■□□□□ 0.13
COMMD1-202ENST00000427417 CERKQ8TCT0 537 aa15.87■□□□□ 0.13
COMMD1-202ENST00000427417 FAM135AQ9P2D6 1515 aa15.87■□□□□ 0.13
COMMD1-202ENST00000427417 NCOA1Q15788 1441 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms