RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 SCAPERQ9BY12 1400 aa21.2■□□□□ 0.98
NELFE-203ENST00000426722 RIMS1Q86UR5 1692 aaKnown RBP21.18■□□□□ 0.98
NELFE-203ENST00000426722 KIF14Q15058 1648 aa21.17■□□□□ 0.98
NELFE-203ENST00000426722 TROQ12816 1431 aaPredicted RBP21.16■□□□□ 0.98
NELFE-203ENST00000426722 YEATS2Q9ULM3 1422 aa21.16■□□□□ 0.98
NELFE-203ENST00000426722 CLIP1P30622 1438 aa21.15■□□□□ 0.98
NELFE-203ENST00000426722 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.98
NELFE-203ENST00000426722 LRRIQ1Q96JM4 1722 aa21.12■□□□□ 0.97
NELFE-203ENST00000426722 ATP10AO60312 1499 aa21.11■□□□□ 0.97
NELFE-203ENST00000426722 SIGLEC1Q9BZZ2 1709 aa21.1■□□□□ 0.97
NELFE-203ENST00000426722 LMTK3Q96Q04 1460 aa21.1■□□□□ 0.97
NELFE-203ENST00000426722 ZNF518AQ6AHZ1 1483 aa21.09■□□□□ 0.97
NELFE-203ENST00000426722 C9orf84Q5VXU9 1444 aa21.09■□□□□ 0.97
NELFE-203ENST00000426722 ARHGAP5Q13017 1502 aa21.09■□□□□ 0.97
NELFE-203ENST00000426722 CCDC18Q5T9S5 1454 aa21.08■□□□□ 0.97
NELFE-203ENST00000426722 FER1L4A9Z1Z3 1794 aa21.08■□□□□ 0.97
NELFE-203ENST00000426722 CASKIN1Q8WXD9 1431 aa21.07■□□□□ 0.96
NELFE-203ENST00000426722 CDC42BPBQ9Y5S2 1711 aa21.05■□□□□ 0.96
NELFE-203ENST00000426722 KDM5CP41229 1560 aa21.05■□□□□ 0.96
NELFE-203ENST00000426722 MLECQ14165 292 aa21.04■□□□□ 0.96
NELFE-203ENST00000426722 ARHGEF12Q9NZN5 1544 aa21.04■□□□□ 0.96
NELFE-203ENST00000426722 FBXO41Q8TF61 875 aa21.03■□□□□ 0.96
NELFE-203ENST00000426722 PREX2Q70Z35 1606 aa21.01■□□□□ 0.95
NELFE-203ENST00000426722 AFAP1Q8N556 730 aa21.01■□□□□ 0.95
NELFE-203ENST00000426722 REREQ9P2R6 1566 aa20.99■□□□□ 0.95
NELFE-203ENST00000426722 MLH3Q9UHC1 1453 aa20.99■□□□□ 0.95
NELFE-203ENST00000426722 PLPPR3Q6T4P5 718 aa20.98■□□□□ 0.95
NELFE-203ENST00000426722 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
NELFE-203ENST00000426722 FYCO1Q9BQS8 1478 aa20.98■□□□□ 0.95
NELFE-203ENST00000426722 DIP2CQ9Y2E4 1556 aa20.96■□□□□ 0.95
NELFE-203ENST00000426722 ABCC1P33527 1531 aa20.95■□□□□ 0.94
NELFE-203ENST00000426722 ITSN2Q9NZM3 1697 aa20.95■□□□□ 0.94
NELFE-203ENST00000426722 CDC42BPAQ5VT25 1732 aa20.95■□□□□ 0.94
NELFE-203ENST00000426722 SETD1BQ9UPS6 1966 aaKnown RBP20.94■□□□□ 0.94
NELFE-203ENST00000426722 HSPA2P54652 639 aa20.94■□□□□ 0.94
NELFE-203ENST00000426722 PREX1Q8TCU6 1659 aa20.93■□□□□ 0.94
NELFE-203ENST00000426722 AGLP35573 1532 aa20.92■□□□□ 0.94
NELFE-203ENST00000426722 ABCA6Q8N139 1617 aa20.91■□□□□ 0.94
NELFE-203ENST00000426722 TRAPPC8Q9Y2L5 1435 aa20.91■□□□□ 0.94
NELFE-203ENST00000426722 KIDINS220Q9ULH0 1771 aa20.87■□□□□ 0.93
NELFE-203ENST00000426722 CEBPAP49715 358 aaPredicted RBP20.87■□□□□ 0.93
NELFE-203ENST00000426722 ESF1Q9H501 851 aaKnown RBP20.85■□□□□ 0.93
NELFE-203ENST00000426722 GPATCH8Q9UKJ3 1502 aaKnown RBP20.84■□□□□ 0.93
NELFE-203ENST00000426722 UHRF1BP1Q6BDS2 1440 aa20.84■□□□□ 0.93
NELFE-203ENST00000426722 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.92
NELFE-203ENST00000426722 C3P01024 1663 aa20.83■□□□□ 0.92
NELFE-203ENST00000426722 ZNF777Q9ULD5 760 aaPredicted RBP20.82■□□□□ 0.92
NELFE-203ENST00000426722 DMRT2Q9Y5R5 561 aa20.82■□□□□ 0.92
NELFE-203ENST00000426722 PLEKHH2Q8IVE3 1493 aa20.81■□□□□ 0.92
NELFE-203ENST00000426722 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
NELFE-203ENST00000426722 KIAA1107Q9UPP5 1409 aa20.81■□□□□ 0.92
NELFE-203ENST00000426722 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
NELFE-203ENST00000426722 SPAG9O60271 1321 aaKnown RBP20.78■□□□□ 0.92
NELFE-203ENST00000426722 MTUS2Q5JR59 1369 aa20.78■□□□□ 0.92
NELFE-203ENST00000426722 CCNB3Q8WWL7 1395 aa20.78■□□□□ 0.92
NELFE-203ENST00000426722 CERKQ8TCT0 537 aa20.78■□□□□ 0.92
NELFE-203ENST00000426722 CFDP1Q9UEE9 299 aaPredicted RBP20.78■□□□□ 0.92
NELFE-203ENST00000426722 STRCQ7RTU9 1775 aa20.77■□□□□ 0.91
NELFE-203ENST00000426722 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.91
NELFE-203ENST00000426722 MROH2AA6NES4 1674 aa20.75■□□□□ 0.91
NELFE-203ENST00000426722 ATP7AQ04656 1500 aa20.73■□□□□ 0.91
NELFE-203ENST00000426722 SUPT6HQ7KZ85 1726 aaKnown RBP20.72■□□□□ 0.91
NELFE-203ENST00000426722 EHBP1L1Q8N3D4 1523 aa20.72■□□□□ 0.91
NELFE-203ENST00000426722 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
NELFE-203ENST00000426722 PTPRTO14522 1441 aa20.7■□□□□ 0.9
NELFE-203ENST00000426722 NPATQ14207 1427 aa20.7■□□□□ 0.9
NELFE-203ENST00000426722 A2MP01023 1474 aa20.69■□□□□ 0.9
NELFE-203ENST00000426722 PLXNC1O60486 1568 aa20.69■□□□□ 0.9
NELFE-203ENST00000426722 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
NELFE-203ENST00000426722 ZMYM3Q14202 1370 aa20.68■□□□□ 0.9
NELFE-203ENST00000426722 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
NELFE-203ENST00000426722 ADGBQ8N7X0 1667 aa20.67■□□□□ 0.9
NELFE-203ENST00000426722 CEP162Q5TB80 1403 aa20.67■□□□□ 0.9
NELFE-203ENST00000426722 RTEL1-TNFRSF6BF6WH68 1400 aa20.65■□□□□ 0.9
NELFE-203ENST00000426722 CLTCQ00610 1675 aaKnown RBP20.64■□□□□ 0.89
NELFE-203ENST00000426722 MBD5Q9P267 1494 aa20.63■□□□□ 0.89
NELFE-203ENST00000426722 RSPH4AQ5TD94 716 aa20.62■□□□□ 0.89
NELFE-203ENST00000426722 NCOA1Q15788 1441 aa20.61■□□□□ 0.89
NELFE-203ENST00000426722 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
NELFE-203ENST00000426722 GGT6Q6P531 493 aa20.6■□□□□ 0.89
NELFE-203ENST00000426722 CAMSAP1Q5T5Y3 1602 aa20.58■□□□□ 0.89
NELFE-203ENST00000426722 ZNF142P52746 1687 aaPredicted RBP20.57■□□□□ 0.88
NELFE-203ENST00000426722 DHX29Q7Z478 1369 aaKnown RBP20.57■□□□□ 0.88
NELFE-203ENST00000426722 NCOA2Q15596 1464 aa20.56■□□□□ 0.88
NELFE-203ENST00000426722 PTPRKQ15262 1439 aa20.56■□□□□ 0.88
NELFE-203ENST00000426722 IQSEC2Q5JU85 1478 aa20.55■□□□□ 0.88
NELFE-203ENST00000426722 CCDC141Q6ZP82 1450 aa20.55■□□□□ 0.88
NELFE-203ENST00000426722 MYO3AQ8NEV4 1616 aa20.54■□□□□ 0.88
NELFE-203ENST00000426722 PLA2R1Q13018 1463 aa20.54■□□□□ 0.88
NELFE-203ENST00000426722 LTBP4Q8N2S1 1624 aa20.53■□□□□ 0.88
NELFE-203ENST00000426722 PKD2Q13563 968 aa20.53■□□□□ 0.88
NELFE-203ENST00000426722 FAM135AQ9P2D6 1515 aa20.53■□□□□ 0.88
NELFE-203ENST00000426722 CEP170BQ9Y4F5 1589 aaPredicted RBP20.52■□□□□ 0.88
NELFE-203ENST00000426722 CAMSAP2Q08AD1 1489 aa20.52■□□□□ 0.88
NELFE-203ENST00000426722 ARHGEF5Q12774 1597 aa20.5■□□□□ 0.87
NELFE-203ENST00000426722 VPS8Q8N3P4 1428 aa20.48■□□□□ 0.87
NELFE-203ENST00000426722 KIF3BO15066 747 aa20.48■□□□□ 0.87
NELFE-203ENST00000426722 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
NELFE-203ENST00000426722 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
NELFE-203ENST00000426722 TCOF1Q13428 1488 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms