RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 ARID4BQ4LE39 1312 aaPredicted RBP40.55■■■■■ 4.08
PTPMT1-203ENST00000426530 HECW2Q9P2P5 1572 aa40.54■■■■■ 4.08
PTPMT1-203ENST00000426530 POGZQ7Z3K3 1410 aa40.54■■■■■ 4.08
PTPMT1-203ENST00000426530 ARHGAP5Q13017 1502 aa40.53■■■■■ 4.08
PTPMT1-203ENST00000426530 ZFYVE16Q7Z3T8 1539 aa40.53■■■■■ 4.08
PTPMT1-203ENST00000426530 YEATS2Q9ULM3 1422 aa40.53■■■■■ 4.08
PTPMT1-203ENST00000426530 EFCAB2Q5VUJ9 269 aa40.51■■■■■ 4.08
PTPMT1-203ENST00000426530 SIGLEC1Q9BZZ2 1709 aa40.49■■■■■ 4.07
PTPMT1-203ENST00000426530 MADDQ8WXG6 1647 aa40.49■■■■■ 4.07
PTPMT1-203ENST00000426530 CDC42BPBQ9Y5S2 1711 aa40.47■■■■■ 4.07
PTPMT1-203ENST00000426530 PTPRMP28827 1452 aa40.44■■■■■ 4.06
PTPMT1-203ENST00000426530 PREX2Q70Z35 1606 aa40.43■■■■■ 4.06
PTPMT1-203ENST00000426530 MAGI2Q86UL8 1455 aa40.42■■■■■ 4.06
PTPMT1-203ENST00000426530 RIMS1Q86UR5 1692 aaKnown RBP40.37■■■■■ 4.05
PTPMT1-203ENST00000426530 CDC42BPAQ5VT25 1732 aa40.36■■■■■ 4.05
PTPMT1-203ENST00000426530 ZNF518AQ6AHZ1 1483 aa40.32■■■■■ 4.05
PTPMT1-203ENST00000426530 CEP162Q5TB80 1403 aa40.31■■■■■ 4.04
PTPMT1-203ENST00000426530 KDM5CP41229 1560 aa40.3■■■■■ 4.04
PTPMT1-203ENST00000426530 AFAP1Q8N556 730 aa40.29■■■■■ 4.04
PTPMT1-203ENST00000426530 ABCC1P33527 1531 aa40.28■■■■■ 4.04
PTPMT1-203ENST00000426530 ITSN2Q9NZM3 1697 aa40.25■■■■■ 4.03
PTPMT1-203ENST00000426530 ATP10AO60312 1499 aa40.25■■■■■ 4.03
PTPMT1-203ENST00000426530 MLECQ14165 292 aa40.24■■■■■ 4.03
PTPMT1-203ENST00000426530 ARHGEF12Q9NZN5 1544 aa40.24■■■■■ 4.03
PTPMT1-203ENST00000426530 C9orf84Q5VXU9 1444 aa40.23■■■■■ 4.03
PTPMT1-203ENST00000426530 TRAPPC8Q9Y2L5 1435 aa40.2■■■■■ 4.03
PTPMT1-203ENST00000426530 MYT1LQ9UL68 1186 aa40.19■■■■■ 4.02
PTPMT1-203ENST00000426530 FER1L4A9Z1Z3 1794 aa40.18■■■■■ 4.02
PTPMT1-203ENST00000426530 DIP2CQ9Y2E4 1556 aa40.18■■■■■ 4.02
PTPMT1-203ENST00000426530 PLPPR3Q6T4P5 718 aa40.16■■■■■ 4.02
PTPMT1-203ENST00000426530 ABCA6Q8N139 1617 aa40.16■■■■■ 4.02
PTPMT1-203ENST00000426530 GPATCH8Q9UKJ3 1502 aaKnown RBP40.16■■■■■ 4.02
PTPMT1-203ENST00000426530 SAMD9LQ8IVG5 1584 aa40.15■■■■■ 4.02
PTPMT1-203ENST00000426530 MTUS2Q5JR59 1369 aa40.13■■■■■ 4.02
PTPMT1-203ENST00000426530 ZNF777Q9ULD5 760 aaPredicted RBP40.13■■■■■ 4.01
PTPMT1-203ENST00000426530 MLH3Q9UHC1 1453 aa40.09■■■■■ 4.01
PTPMT1-203ENST00000426530 LOC105371045A0A1W2PR82 267 aa40.09■■■■■ 4.01
PTPMT1-203ENST00000426530 SYCP2Q9BX26 1530 aa40.08■■■■■ 4.01
PTPMT1-203ENST00000426530 EHBP1L1Q8N3D4 1523 aa40.05■■■■■ 4
PTPMT1-203ENST00000426530 KIDINS220Q9ULH0 1771 aa40.05■■■■■ 4
PTPMT1-203ENST00000426530 CCNB3Q8WWL7 1395 aa40.04■■■■■ 4
PTPMT1-203ENST00000426530 LMTK3Q96Q04 1460 aa40.02■■■■■ 4
PTPMT1-203ENST00000426530 REREQ9P2R6 1566 aa40.01■■■■■ 4
PTPMT1-203ENST00000426530 TIAM1Q13009 1591 aa40■■■■□ 3.99
PTPMT1-203ENST00000426530 CFDP1Q9UEE9 299 aaPredicted RBP39.98■■■■□ 3.99
PTPMT1-203ENST00000426530 HNRNPMP52272 730 aaKnown RBP eCLIP39.96■■■■□ 3.99
PTPMT1-203ENST00000426530 PLEKHH2Q8IVE3 1493 aa39.88■■■■□ 3.98
PTPMT1-203ENST00000426530 AGLP35573 1532 aa39.88■■■■□ 3.97
PTPMT1-203ENST00000426530 KIAA1107Q9UPP5 1409 aa39.87■■■■□ 3.97
PTPMT1-203ENST00000426530 CEBPAP49715 358 aaPredicted RBP39.86■■■■□ 3.97
PTPMT1-203ENST00000426530 SPAG9O60271 1321 aaKnown RBP39.86■■■■□ 3.97
PTPMT1-203ENST00000426530 ZNF644Q9H582 1327 aaPredicted RBP39.85■■■■□ 3.97
PTPMT1-203ENST00000426530 VPS8Q8N3P4 1428 aa39.84■■■■□ 3.97
PTPMT1-203ENST00000426530 ATP7AQ04656 1500 aa39.84■■■■□ 3.97
PTPMT1-203ENST00000426530 INO80Q9ULG1 1556 aaPredicted RBP39.84■■■■□ 3.97
PTPMT1-203ENST00000426530 SUPT6HQ7KZ85 1726 aaKnown RBP39.83■■■■□ 3.97
PTPMT1-203ENST00000426530 HSPA2P54652 639 aa39.83■■■■□ 3.97
PTPMT1-203ENST00000426530 NCOA2Q15596 1464 aa39.8■■■■□ 3.96
PTPMT1-203ENST00000426530 ILDR1Q86SU0 546 aaPredicted RBP39.77■■■■□ 3.96
PTPMT1-203ENST00000426530 PREX1Q8TCU6 1659 aa39.75■■■■□ 3.95
PTPMT1-203ENST00000426530 C3P01024 1663 aa39.74■■■■□ 3.95
PTPMT1-203ENST00000426530 MBD5Q9P267 1494 aa39.71■■■■□ 3.95
PTPMT1-203ENST00000426530 PLXNC1O60486 1568 aa39.68■■■■□ 3.94
PTPMT1-203ENST00000426530 A2MP01023 1474 aa39.67■■■■□ 3.94
PTPMT1-203ENST00000426530 LRRC9Q6ZRR7 1453 aa39.67■■■■□ 3.94
PTPMT1-203ENST00000426530 ESF1Q9H501 851 aaKnown RBP39.66■■■■□ 3.94
PTPMT1-203ENST00000426530 CAMSAP2Q08AD1 1489 aa39.66■■■■□ 3.94
PTPMT1-203ENST00000426530 ADGBQ8N7X0 1667 aa39.63■■■■□ 3.93
PTPMT1-203ENST00000426530 CNTLNQ9NXG0 1405 aa39.57■■■■□ 3.93
PTPMT1-203ENST00000426530 KANK4Q5T7N3 995 aaPredicted RBP39.57■■■■□ 3.93
PTPMT1-203ENST00000426530 UHRF1BP1Q6BDS2 1440 aa39.57■■■■□ 3.92
PTPMT1-203ENST00000426530 CCDC141Q6ZP82 1450 aa39.56■■■■□ 3.92
PTPMT1-203ENST00000426530 SETD1BQ9UPS6 1966 aaKnown RBP39.55■■■■□ 3.92
PTPMT1-203ENST00000426530 MROH2AA6NES4 1674 aa39.54■■■■□ 3.92
PTPMT1-203ENST00000426530 CLTCQ00610 1675 aaKnown RBP39.54■■■■□ 3.92
PTPMT1-203ENST00000426530 MAP3K1Q13233 1512 aa39.53■■■■□ 3.92
PTPMT1-203ENST00000426530 RTEL1-TNFRSF6BF6WH68 1400 aa39.51■■■■□ 3.92
PTPMT1-203ENST00000426530 GGT6Q6P531 493 aa39.48■■■■□ 3.91
PTPMT1-203ENST00000426530 ARHGEF5Q12774 1597 aa39.46■■■■□ 3.91
PTPMT1-203ENST00000426530 ZMYM3Q14202 1370 aa39.44■■■■□ 3.9
PTPMT1-203ENST00000426530 STRCQ7RTU9 1775 aa39.44■■■■□ 3.9
PTPMT1-203ENST00000426530 DHX29Q7Z478 1369 aaKnown RBP39.4■■■■□ 3.9
PTPMT1-203ENST00000426530 MYOM3Q5VTT5 1437 aa39.37■■■■□ 3.89
PTPMT1-203ENST00000426530 RSPH4AQ5TD94 716 aa39.36■■■■□ 3.89
PTPMT1-203ENST00000426530 NPATQ14207 1427 aa39.35■■■■□ 3.89
PTPMT1-203ENST00000426530 KIF3BO15066 747 aa39.29■■■■□ 3.88
PTPMT1-203ENST00000426530 TSPY4P0CV99 314 aa39.29■■■■□ 3.88
PTPMT1-203ENST00000426530 TSPY10P0CW01 314 aa39.29■■■■□ 3.88
PTPMT1-203ENST00000426530 MIA2Q96PC5 1412 aa39.29■■■■□ 3.88
PTPMT1-203ENST00000426530 APLP2Q06481 763 aa39.28■■■■□ 3.88
PTPMT1-203ENST00000426530 FBXO41Q8TF61 875 aa39.28■■■■□ 3.88
PTPMT1-203ENST00000426530 PTPRKQ15262 1439 aa39.28■■■■□ 3.88
PTPMT1-203ENST00000426530 MYO3AQ8NEV4 1616 aa39.28■■■■□ 3.88
PTPMT1-203ENST00000426530 MAST1Q9Y2H9 1570 aa39.26■■■■□ 3.88
PTPMT1-203ENST00000426530 PPP6R1Q9UPN7 881 aa39.23■■■■□ 3.87
PTPMT1-203ENST00000426530 ZNF142P52746 1687 aaPredicted RBP39.2■■■■□ 3.87
PTPMT1-203ENST00000426530 CAMSAP1Q5T5Y3 1602 aa39.2■■■■□ 3.87
PTPMT1-203ENST00000426530 KDM5DQ9BY66 1539 aa39.19■■■■□ 3.86
PTPMT1-203ENST00000426530 NCOA1Q15788 1441 aa39.18■■■■□ 3.86
PTPMT1-203ENST00000426530 PTPN23Q9H3S7 1636 aa39.17■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms