RNA–Protein interactions for RNA: ENST00000426493.5

PDLIM2-209, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-209ENST00000426493 ATP1B4Q9UN42 357 aaPredicted RBP29.37■■■□□ 2.29
PDLIM2-209ENST00000426493 POGZQ7Z3K3 1410 aa29.37■■■□□ 2.29
PDLIM2-209ENST00000426493 SCAPERQ9BY12 1400 aa29.37■■■□□ 2.29
PDLIM2-209ENST00000426493 MAGI2Q86UL8 1455 aa29.35■■■□□ 2.29
PDLIM2-209ENST00000426493 PCF11O94913 1555 aaKnown RBP29.33■■■□□ 2.29
PDLIM2-209ENST00000426493 CDC42BPBQ9Y5S2 1711 aa29.32■■■□□ 2.28
PDLIM2-209ENST00000426493 LMTK3Q96Q04 1460 aa29.31■■■□□ 2.28
PDLIM2-209ENST00000426493 TROQ12816 1431 aaPredicted RBP29.31■■■□□ 2.28
PDLIM2-209ENST00000426493 FER1L4A9Z1Z3 1794 aa29.31■■■□□ 2.28
PDLIM2-209ENST00000426493 EFCAB2Q5VUJ9 269 aa29.25■■■□□ 2.27
PDLIM2-209ENST00000426493 CDK11AQ9UQ88 783 aaPredicted RBP29.24■■■□□ 2.27
PDLIM2-209ENST00000426493 KDM5CP41229 1560 aa29.22■■■□□ 2.27
PDLIM2-209ENST00000426493 ARHGAP5Q13017 1502 aa29.22■■■□□ 2.27
PDLIM2-209ENST00000426493 ATP10AO60312 1499 aa29.22■■■□□ 2.27
PDLIM2-209ENST00000426493 PREX2Q70Z35 1606 aa29.2■■■□□ 2.26
PDLIM2-209ENST00000426493 CASKIN1Q8WXD9 1431 aa29.2■■■□□ 2.26
PDLIM2-209ENST00000426493 ARHGEF12Q9NZN5 1544 aa29.19■■■□□ 2.26
PDLIM2-209ENST00000426493 CDC42BPAQ5VT25 1732 aa29.18■■■□□ 2.26
PDLIM2-209ENST00000426493 MLECQ14165 292 aa29.18■■■□□ 2.26
PDLIM2-209ENST00000426493 CLIP1P30622 1438 aa29.18■■■□□ 2.26
PDLIM2-209ENST00000426493 C9orf84Q5VXU9 1444 aa29.17■■■□□ 2.26
PDLIM2-209ENST00000426493 ZNF518AQ6AHZ1 1483 aa29.16■■■□□ 2.26
PDLIM2-209ENST00000426493 AFAP1Q8N556 730 aa29.15■■■□□ 2.26
PDLIM2-209ENST00000426493 PLPPR3Q6T4P5 718 aa29.14■■■□□ 2.26
PDLIM2-209ENST00000426493 ITSN2Q9NZM3 1697 aa29.14■■■□□ 2.26
PDLIM2-209ENST00000426493 DIP2CQ9Y2E4 1556 aa29.13■■■□□ 2.25
PDLIM2-209ENST00000426493 CCDC18Q5T9S5 1454 aa29.13■■■□□ 2.25
PDLIM2-209ENST00000426493 ABCA6Q8N139 1617 aa29.12■■■□□ 2.25
PDLIM2-209ENST00000426493 HSPA2P54652 639 aa29.11■■■□□ 2.25
PDLIM2-209ENST00000426493 ABCC1P33527 1531 aa29.1■■■□□ 2.25
PDLIM2-209ENST00000426493 FYCO1Q9BQS8 1478 aa29.07■■■□□ 2.24
PDLIM2-209ENST00000426493 REREQ9P2R6 1566 aa29.07■■■□□ 2.24
PDLIM2-209ENST00000426493 TRAPPC8Q9Y2L5 1435 aa29.06■■■□□ 2.24
PDLIM2-209ENST00000426493 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
PDLIM2-209ENST00000426493 PREX1Q8TCU6 1659 aa29.05■■■□□ 2.24
PDLIM2-209ENST00000426493 MLH3Q9UHC1 1453 aa29.04■■■□□ 2.24
PDLIM2-209ENST00000426493 SETD1BQ9UPS6 1966 aaKnown RBP29.02■■■□□ 2.24
PDLIM2-209ENST00000426493 FBXO41Q8TF61 875 aa29.02■■■□□ 2.24
PDLIM2-209ENST00000426493 CEBPAP49715 358 aaPredicted RBP29■■■□□ 2.23
PDLIM2-209ENST00000426493 SAMD9LQ8IVG5 1584 aa28.99■■■□□ 2.23
PDLIM2-209ENST00000426493 C3P01024 1663 aa28.97■■■□□ 2.23
PDLIM2-209ENST00000426493 STRCQ7RTU9 1775 aa28.95■■■□□ 2.22
PDLIM2-209ENST00000426493 AGLP35573 1532 aa28.94■■■□□ 2.22
PDLIM2-209ENST00000426493 GPATCH8Q9UKJ3 1502 aaKnown RBP28.94■■■□□ 2.22
PDLIM2-209ENST00000426493 MYT1LQ9UL68 1186 aa28.92■■■□□ 2.22
PDLIM2-209ENST00000426493 SYCP2Q9BX26 1530 aa28.89■■■□□ 2.22
PDLIM2-209ENST00000426493 SUPT6HQ7KZ85 1726 aaKnown RBP28.84■■■□□ 2.21
PDLIM2-209ENST00000426493 ZNF777Q9ULD5 760 aaPredicted RBP28.83■■■□□ 2.21
PDLIM2-209ENST00000426493 INO80Q9ULG1 1556 aaPredicted RBP28.8■■■□□ 2.2
PDLIM2-209ENST00000426493 HNRNPMP52272 730 aaKnown RBP eCLIP28.8■■■□□ 2.2
PDLIM2-209ENST00000426493 UHRF1BP1Q6BDS2 1440 aa28.78■■■□□ 2.2
PDLIM2-209ENST00000426493 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
PDLIM2-209ENST00000426493 TIAM1Q13009 1591 aa28.77■■■□□ 2.2
PDLIM2-209ENST00000426493 ATP7AQ04656 1500 aa28.77■■■□□ 2.2
PDLIM2-209ENST00000426493 KIAA1107Q9UPP5 1409 aa28.77■■■□□ 2.2
PDLIM2-209ENST00000426493 PLXNC1O60486 1568 aa28.75■■■□□ 2.19
PDLIM2-209ENST00000426493 SPAG9O60271 1321 aaKnown RBP28.73■■■□□ 2.19
PDLIM2-209ENST00000426493 CERKQ8TCT0 537 aa28.73■■■□□ 2.19
PDLIM2-209ENST00000426493 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
PDLIM2-209ENST00000426493 CFDP1Q9UEE9 299 aaPredicted RBP28.72■■■□□ 2.19
PDLIM2-209ENST00000426493 MTUS2Q5JR59 1369 aa28.72■■■□□ 2.19
PDLIM2-209ENST00000426493 PLEKHH2Q8IVE3 1493 aa28.72■■■□□ 2.19
PDLIM2-209ENST00000426493 CLTCQ00610 1675 aaKnown RBP28.71■■■□□ 2.19
PDLIM2-209ENST00000426493 CNTLNQ9NXG0 1405 aa28.69■■■□□ 2.18
PDLIM2-209ENST00000426493 EHBP1L1Q8N3D4 1523 aa28.69■■■□□ 2.18
PDLIM2-209ENST00000426493 CEP162Q5TB80 1403 aa28.68■■■□□ 2.18
PDLIM2-209ENST00000426493 ZNF644Q9H582 1327 aaPredicted RBP28.68■■■□□ 2.18
PDLIM2-209ENST00000426493 ADGBQ8N7X0 1667 aa28.67■■■□□ 2.18
PDLIM2-209ENST00000426493 A2MP01023 1474 aa28.66■■■□□ 2.18
PDLIM2-209ENST00000426493 MBD5Q9P267 1494 aa28.66■■■□□ 2.18
PDLIM2-209ENST00000426493 ESF1Q9H501 851 aaKnown RBP28.65■■■□□ 2.18
PDLIM2-209ENST00000426493 ZMYM3Q14202 1370 aa28.62■■■□□ 2.17
PDLIM2-209ENST00000426493 PTPRTO14522 1441 aa28.6■■■□□ 2.17
PDLIM2-209ENST00000426493 NPATQ14207 1427 aa28.6■■■□□ 2.17
PDLIM2-209ENST00000426493 DMRT2Q9Y5R5 561 aa28.59■■■□□ 2.17
PDLIM2-209ENST00000426493 NCOA1Q15788 1441 aa28.58■■■□□ 2.17
PDLIM2-209ENST00000426493 ZNF142P52746 1687 aaPredicted RBP28.57■■■□□ 2.16
PDLIM2-209ENST00000426493 MYO3AQ8NEV4 1616 aa28.56■■■□□ 2.16
PDLIM2-209ENST00000426493 CAMSAP1Q5T5Y3 1602 aa28.55■■■□□ 2.16
PDLIM2-209ENST00000426493 LTBP4Q8N2S1 1624 aa28.54■■■□□ 2.16
PDLIM2-209ENST00000426493 NCOA2Q15596 1464 aa28.53■■■□□ 2.16
PDLIM2-209ENST00000426493 PTPRKQ15262 1439 aa28.52■■■□□ 2.16
PDLIM2-209ENST00000426493 RTEL1-TNFRSF6BF6WH68 1400 aa28.52■■■□□ 2.16
PDLIM2-209ENST00000426493 GGT6Q6P531 493 aa28.51■■■□□ 2.15
PDLIM2-209ENST00000426493 CAMSAP2Q08AD1 1489 aa28.48■■■□□ 2.15
PDLIM2-209ENST00000426493 CEP170BQ9Y4F5 1589 aaPredicted RBP28.47■■■□□ 2.15
PDLIM2-209ENST00000426493 DHX29Q7Z478 1369 aaKnown RBP28.45■■■□□ 2.14
PDLIM2-209ENST00000426493 CCDC141Q6ZP82 1450 aa28.45■■■□□ 2.14
PDLIM2-209ENST00000426493 LOC105371045A0A1W2PR82 267 aa28.42■■■□□ 2.14
PDLIM2-209ENST00000426493 NCKAP5LQ9HCH0 1330 aa28.42■■■□□ 2.14
PDLIM2-209ENST00000426493 ARHGEF5Q12774 1597 aa28.41■■■□□ 2.14
PDLIM2-209ENST00000426493 PPP6R1Q9UPN7 881 aa28.41■■■□□ 2.14
PDLIM2-209ENST00000426493 VPS8Q8N3P4 1428 aa28.38■■■□□ 2.13
PDLIM2-209ENST00000426493 DNMT1P26358 1616 aaKnown RBP28.38■■■□□ 2.13
PDLIM2-209ENST00000426493 PLA2R1Q13018 1463 aa28.38■■■□□ 2.13
PDLIM2-209ENST00000426493 TCOF1Q13428 1488 aaKnown RBP28.38■■■□□ 2.13
PDLIM2-209ENST00000426493 LRRC9Q6ZRR7 1453 aa28.38■■■□□ 2.13
PDLIM2-209ENST00000426493 KIF3BO15066 747 aa28.34■■■□□ 2.13
PDLIM2-209ENST00000426493 IQSEC2Q5JU85 1478 aa28.33■■■□□ 2.13
PDLIM2-209ENST00000426493 A2ML1A8K2U0 1454 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms