RNA–Protein interactions for RNA: ENST00000426471.6

LINC00993-202, long intergenic non-protein coding RNA 993, humanhuman

TSL 2

Gene LINC00993, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-202ENST00000426471 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
LINC00993-202ENST00000426471 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
LINC00993-202ENST00000426471 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
LINC00993-202ENST00000426471 HOXB1P14653 301 aaPredicted RBP13.35□□□□□ -0.27
LINC00993-202ENST00000426471 HS3ST6Q96QI5 342 aa13.34□□□□□ -0.27
LINC00993-202ENST00000426471 PPP1R37O75864 691 aa13.33□□□□□ -0.28
LINC00993-202ENST00000426471 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
LINC00993-202ENST00000426471 ERBB3P21860 1342 aa13.31□□□□□ -0.28
LINC00993-202ENST00000426471 C2orf72A6NCS6 295 aa13.3□□□□□ -0.28
LINC00993-202ENST00000426471 ZSWIM6Q9HCJ5 1215 aa13.3□□□□□ -0.28
LINC00993-202ENST00000426471 RYDENQ9NUL5 291 aaKnown RBP13.26□□□□□ -0.29
LINC00993-202ENST00000426471 POTEB3A0JP26 581 aa13.24□□□□□ -0.29
LINC00993-202ENST00000426471 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
LINC00993-202ENST00000426471 KIF3CO14782 793 aa13.23□□□□□ -0.29
LINC00993-202ENST00000426471 ARSIQ5FYB1 569 aa13.23□□□□□ -0.29
LINC00993-202ENST00000426471 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
LINC00993-202ENST00000426471 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
LINC00993-202ENST00000426471 VARS2Q5ST30 1063 aaKnown RBP13.21□□□□□ -0.29
LINC00993-202ENST00000426471 DNAJC5Q9H3Z4 198 aa13.19□□□□□ -0.3
LINC00993-202ENST00000426471 KHSRPQ92945 711 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00993-202ENST00000426471 SPNS2Q8IVW8 549 aa13.14□□□□□ -0.31
LINC00993-202ENST00000426471 KRTAP3-3Q9BYR6 98 aa13.13□□□□□ -0.31
LINC00993-202ENST00000426471 KRTAP3-2Q9BYR7 98 aa13.13□□□□□ -0.31
LINC00993-202ENST00000426471 NUDT7P0C024 238 aa13.11□□□□□ -0.31
LINC00993-202ENST00000426471 PCDHGA4Q9Y5G9 962 aa13.11□□□□□ -0.31
LINC00993-202ENST00000426471 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
LINC00993-202ENST00000426471 GPHNQ9NQX3 736 aaPredicted RBP13.1□□□□□ -0.31
LINC00993-202ENST00000426471 SLC34A2O95436 690 aa13.09□□□□□ -0.31
LINC00993-202ENST00000426471 PLPP6Q8IY26 295 aa13.09□□□□□ -0.31
LINC00993-202ENST00000426471 MMRN1Q13201 1228 aa13.08□□□□□ -0.32
LINC00993-202ENST00000426471 FOXK1P85037 733 aa13.07□□□□□ -0.32
LINC00993-202ENST00000426471 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
LINC00993-202ENST00000426471 DSG2Q14126 1118 aa13.05□□□□□ -0.32
LINC00993-202ENST00000426471 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
LINC00993-202ENST00000426471 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
LINC00993-202ENST00000426471 TBC1D12O60347 775 aa13.01□□□□□ -0.33
LINC00993-202ENST00000426471 AMER1Q5JTC6 1135 aaPredicted RBP13□□□□□ -0.33
LINC00993-202ENST00000426471 PDE4AP27815 886 aa12.99□□□□□ -0.33
LINC00993-202ENST00000426471 PTCD2Q8WV60 388 aaKnown RBP12.98□□□□□ -0.33
LINC00993-202ENST00000426471 PPP1R15BQ5SWA1 713 aa12.96□□□□□ -0.33
LINC00993-202ENST00000426471 ANKRD13DQ6ZTN6 518 aa12.96□□□□□ -0.33
LINC00993-202ENST00000426471 CRISPLD2Q9H0B8 497 aa12.96□□□□□ -0.33
LINC00993-202ENST00000426471 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00993-202ENST00000426471 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
LINC00993-202ENST00000426471 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
LINC00993-202ENST00000426471 NCKAP5LQ9HCH0 1330 aa12.9□□□□□ -0.34
LINC00993-202ENST00000426471 PBX2P40425 430 aa12.9□□□□□ -0.34
LINC00993-202ENST00000426471 BBXQ8WY36 941 aaPredicted RBP12.89□□□□□ -0.35
LINC00993-202ENST00000426471 DDX27Q96GQ7 796 aaKnown RBP12.89□□□□□ -0.35
LINC00993-202ENST00000426471 LSM11P83369 360 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC00993-202ENST00000426471 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
LINC00993-202ENST00000426471 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
LINC00993-202ENST00000426471 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
LINC00993-202ENST00000426471 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
LINC00993-202ENST00000426471 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
LINC00993-202ENST00000426471 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
LINC00993-202ENST00000426471 PTGER2P43116 358 aa12.84□□□□□ -0.35
LINC00993-202ENST00000426471 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
LINC00993-202ENST00000426471 KDM4FA0A1W2PPD8 638 aa12.83□□□□□ -0.36
LINC00993-202ENST00000426471 ARHGAP33O14559 1287 aa12.82□□□□□ -0.36
LINC00993-202ENST00000426471 KCNH8Q96L42 1107 aa12.81□□□□□ -0.36
LINC00993-202ENST00000426471 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
LINC00993-202ENST00000426471 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
LINC00993-202ENST00000426471 CADPS2Q86UW7 1296 aa12.79□□□□□ -0.36
LINC00993-202ENST00000426471 MFSD10Q14728 455 aa12.78□□□□□ -0.36
LINC00993-202ENST00000426471 ZNF454Q8N9F8 522 aa12.78□□□□□ -0.36
LINC00993-202ENST00000426471 SPRYD3Q8NCJ5 442 aa12.78□□□□□ -0.36
LINC00993-202ENST00000426471 EVI5O60447 810 aa12.75□□□□□ -0.37
LINC00993-202ENST00000426471 PSEN2P49810 448 aa12.74□□□□□ -0.37
LINC00993-202ENST00000426471 KCNK17Q96T54 332 aa12.74□□□□□ -0.37
LINC00993-202ENST00000426471 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
LINC00993-202ENST00000426471 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
LINC00993-202ENST00000426471 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
LINC00993-202ENST00000426471 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
LINC00993-202ENST00000426471 STAC3Q96MF2 364 aa12.7□□□□□ -0.38
LINC00993-202ENST00000426471 EMILIN3Q9NT22 766 aa12.69□□□□□ -0.38
LINC00993-202ENST00000426471 FOSBP53539 338 aa12.67□□□□□ -0.38
LINC00993-202ENST00000426471 TK2O00142 265 aa12.66□□□□□ -0.38
LINC00993-202ENST00000426471 JPH4Q96JJ6 628 aa12.66□□□□□ -0.38
LINC00993-202ENST00000426471 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
LINC00993-202ENST00000426471 PTPREP23469 700 aa12.64□□□□□ -0.39
LINC00993-202ENST00000426471 ZDHHC16Q969W1 377 aa12.64□□□□□ -0.39
LINC00993-202ENST00000426471 BCL2L12Q9HB09 334 aa12.64□□□□□ -0.39
LINC00993-202ENST00000426471 DPYSL4O14531 572 aa12.6□□□□□ -0.39
LINC00993-202ENST00000426471 CAMK2BQ13554 666 aa12.59□□□□□ -0.39
LINC00993-202ENST00000426471 ADAM33Q9BZ11 813 aa12.58□□□□□ -0.4
LINC00993-202ENST00000426471 WDR70Q9NW82 654 aa12.58□□□□□ -0.4
LINC00993-202ENST00000426471 HRO43593 1189 aa12.56□□□□□ -0.4
LINC00993-202ENST00000426471 VPS9D1Q9Y2B5 631 aa12.56□□□□□ -0.4
LINC00993-202ENST00000426471 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
LINC00993-202ENST00000426471 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
LINC00993-202ENST00000426471 PCDHGA10Q9Y5H3 936 aa12.54□□□□□ -0.4
LINC00993-202ENST00000426471 PHF14O94880 888 aa12.53□□□□□ -0.4
LINC00993-202ENST00000426471 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
LINC00993-202ENST00000426471 KCTD12Q96CX2 325 aaKnown RBP12.53□□□□□ -0.4
LINC00993-202ENST00000426471 GOLGA8CPA6NN73 597 aa12.51□□□□□ -0.41
LINC00993-202ENST00000426471 SLC4A5Q9BY07 1137 aa12.51□□□□□ -0.41
LINC00993-202ENST00000426471 ZBED2Q9BTP6 218 aa12.5□□□□□ -0.41
LINC00993-202ENST00000426471 E2F4Q16254 413 aa12.49□□□□□ -0.41
LINC00993-202ENST00000426471 DDX12PQ92771 950 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms