RNA–Protein interactions for RNA: ENST00000426217.1

MTND4P28-201, Transcript of MT-ND4 pseudogene 28, humanhuman

BASIC

Gene MTND4P28, Length 387 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTND4P28-201ENST00000426217 PHF8Q9UPP1 1060 aa12.52□□□□□ -0.41
MTND4P28-201ENST00000426217 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.51□□□□□ -0.41
MTND4P28-201ENST00000426217 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
MTND4P28-201ENST00000426217 ZFP91Q96JP5 570 aaPredicted RBP12.51□□□□□ -0.41
MTND4P28-201ENST00000426217 ARSIQ5FYB1 569 aa12.48□□□□□ -0.41
MTND4P28-201ENST00000426217 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.42
MTND4P28-201ENST00000426217 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
MTND4P28-201ENST00000426217 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
MTND4P28-201ENST00000426217 FBXO22Q8NEZ5 403 aa12.4□□□□□ -0.42
MTND4P28-201ENST00000426217 PTGER2P43116 358 aa12.39□□□□□ -0.43
MTND4P28-201ENST00000426217 ANKRD13DQ6ZTN6 518 aa12.38□□□□□ -0.43
MTND4P28-201ENST00000426217 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.43
MTND4P28-201ENST00000426217 KIF3CO14782 793 aa12.34□□□□□ -0.43
MTND4P28-201ENST00000426217 NLRP6P59044 892 aa12.34□□□□□ -0.43
MTND4P28-201ENST00000426217 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
MTND4P28-201ENST00000426217 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
MTND4P28-201ENST00000426217 POTEEQ6S8J3 1075 aa12.3□□□□□ -0.44
MTND4P28-201ENST00000426217 C2orf72A6NCS6 295 aa12.28□□□□□ -0.44
MTND4P28-201ENST00000426217 NUDT7P0C024 238 aa12.28□□□□□ -0.44
MTND4P28-201ENST00000426217 PBX2P40425 430 aa12.24□□□□□ -0.45
MTND4P28-201ENST00000426217 LHX6Q9UPM6 363 aa12.24□□□□□ -0.45
MTND4P28-201ENST00000426217 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
MTND4P28-201ENST00000426217 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
MTND4P28-201ENST00000426217 SLC34A2O95436 690 aa12.21□□□□□ -0.45
MTND4P28-201ENST00000426217 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
MTND4P28-201ENST00000426217 STK25O00506 426 aa12.15□□□□□ -0.46
MTND4P28-201ENST00000426217 TAOK2Q9UL54 1235 aa12.15□□□□□ -0.46
MTND4P28-201ENST00000426217 PLA2G2EQ9NZK7 142 aa12.13□□□□□ -0.47
MTND4P28-201ENST00000426217 KDM4FA0A1W2PPD8 638 aa12.12□□□□□ -0.47
MTND4P28-201ENST00000426217 ADGRD1Q6QNK2 874 aa12.11□□□□□ -0.47
MTND4P28-201ENST00000426217 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
MTND4P28-201ENST00000426217 TMC2Q8TDI7 906 aa12.09□□□□□ -0.47
MTND4P28-201ENST00000426217 ARHGAP33O14559 1287 aa12.08□□□□□ -0.48
MTND4P28-201ENST00000426217 PPP1R37O75864 691 aa12.08□□□□□ -0.48
MTND4P28-201ENST00000426217 HRO43593 1189 aa12.04□□□□□ -0.48
MTND4P28-201ENST00000426217 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
MTND4P28-201ENST00000426217 RGL2O15211 777 aa12.03□□□□□ -0.48
MTND4P28-201ENST00000426217 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
MTND4P28-201ENST00000426217 PSEN2P49810 448 aa12.02□□□□□ -0.49
MTND4P28-201ENST00000426217 PSDA5PKW4 1024 aaPredicted RBP12.01□□□□□ -0.49
MTND4P28-201ENST00000426217 PTCD2Q8WV60 388 aaKnown RBP12.01□□□□□ -0.49
MTND4P28-201ENST00000426217 TK2O00142 265 aa12□□□□□ -0.49
MTND4P28-201ENST00000426217 PKD2Q13563 968 aa11.99□□□□□ -0.49
MTND4P28-201ENST00000426217 FOXK1P85037 733 aa11.94□□□□□ -0.5
MTND4P28-201ENST00000426217 PLPP6Q8IY26 295 aa11.93□□□□□ -0.5
MTND4P28-201ENST00000426217 KCTD12Q96CX2 325 aaKnown RBP11.92□□□□□ -0.5
MTND4P28-201ENST00000426217 PPP4R3BQ5MIZ7 849 aa11.9□□□□□ -0.5
MTND4P28-201ENST00000426217 DSG2Q14126 1118 aa11.89□□□□□ -0.51
MTND4P28-201ENST00000426217 GPHNQ9NQX3 736 aaPredicted RBP11.89□□□□□ -0.51
MTND4P28-201ENST00000426217 KCNK17Q96T54 332 aa11.86□□□□□ -0.51
MTND4P28-201ENST00000426217 VPS9D1Q9Y2B5 631 aa11.84□□□□□ -0.51
MTND4P28-201ENST00000426217 TBC1D12O60347 775 aa11.81□□□□□ -0.52
MTND4P28-201ENST00000426217 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
MTND4P28-201ENST00000426217 STAC3Q96MF2 364 aa11.79□□□□□ -0.52
MTND4P28-201ENST00000426217 PTPN5P54829 565 aa11.78□□□□□ -0.52
MTND4P28-201ENST00000426217 BHMG1C9JSJ3 638 aaPredicted RBP11.75□□□□□ -0.53
MTND4P28-201ENST00000426217 HS6ST3Q8IZP7 471 aa11.75□□□□□ -0.53
MTND4P28-201ENST00000426217 SLC4A5Q9BY07 1137 aa11.75□□□□□ -0.53
MTND4P28-201ENST00000426217 BCL2L12Q9HB09 334 aa11.75□□□□□ -0.53
MTND4P28-201ENST00000426217 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
MTND4P28-201ENST00000426217 ZNF454Q8N9F8 522 aa11.74□□□□□ -0.53
MTND4P28-201ENST00000426217 KCNH8Q96L42 1107 aa11.74□□□□□ -0.53
MTND4P28-201ENST00000426217 UPF1Q92900 1129 aaKnown RBP eCLIP11.73□□□□□ -0.53
MTND4P28-201ENST00000426217 THSD4Q6ZMP0 1018 aa11.72□□□□□ -0.53
MTND4P28-201ENST00000426217 RGS20O76081 388 aa11.7□□□□□ -0.54
MTND4P28-201ENST00000426217 FOSBP53539 338 aa11.7□□□□□ -0.54
MTND4P28-201ENST00000426217 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
MTND4P28-201ENST00000426217 CRISPLD2Q9H0B8 497 aa11.69□□□□□ -0.54
MTND4P28-201ENST00000426217 A0A0G2JS52 829 aa11.67□□□□□ -0.54
MTND4P28-201ENST00000426217 NKX1-1Q15270 411 aaPredicted RBP11.67□□□□□ -0.54
MTND4P28-201ENST00000426217 PTPREP23469 700 aa11.65□□□□□ -0.54
MTND4P28-201ENST00000426217 ANO8Q9HCE9 1232 aaPredicted RBP11.65□□□□□ -0.54
MTND4P28-201ENST00000426217 PPP1R15BQ5SWA1 713 aa11.64□□□□□ -0.55
MTND4P28-201ENST00000426217 WNT2BQ93097 391 aa11.64□□□□□ -0.55
MTND4P28-201ENST00000426217 IRX2Q9BZI1 471 aaPredicted RBP11.62□□□□□ -0.55
MTND4P28-201ENST00000426217 NCKAP5LQ9HCH0 1330 aa11.61□□□□□ -0.55
MTND4P28-201ENST00000426217 MRPL50Q8N5N7 158 aaKnown RBP11.61□□□□□ -0.55
MTND4P28-201ENST00000426217 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
MTND4P28-201ENST00000426217 ADAM33Q9BZ11 813 aa11.61□□□□□ -0.55
MTND4P28-201ENST00000426217 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
MTND4P28-201ENST00000426217 DNAJC5Q9H3Z4 198 aa11.6□□□□□ -0.55
MTND4P28-201ENST00000426217 GOLGA8CPA6NN73 597 aa11.59□□□□□ -0.55
MTND4P28-201ENST00000426217 EVI5O60447 810 aa11.57□□□□□ -0.56
MTND4P28-201ENST00000426217 ZDHHC16Q969W1 377 aa11.57□□□□□ -0.56
MTND4P28-201ENST00000426217 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
MTND4P28-201ENST00000426217 ITGBL1O95965 494 aaPredicted RBP11.5□□□□□ -0.57
MTND4P28-201ENST00000426217 PDE4AP27815 886 aa11.5□□□□□ -0.57
MTND4P28-201ENST00000426217 PROX2Q3B8N5 592 aa11.5□□□□□ -0.57
MTND4P28-201ENST00000426217 COL9A1P20849 921 aa11.49□□□□□ -0.57
MTND4P28-201ENST00000426217 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
MTND4P28-201ENST00000426217 RYDENQ9NUL5 291 aaKnown RBP11.48□□□□□ -0.57
MTND4P28-201ENST00000426217 RABGEF1Q9UJ41 708 aa11.48□□□□□ -0.57
MTND4P28-201ENST00000426217 PCDHGA10Q9Y5H3 936 aa11.48□□□□□ -0.57
MTND4P28-201ENST00000426217 BCAMP50895 628 aa11.46□□□□□ -0.57
MTND4P28-201ENST00000426217 EMILIN3Q9NT22 766 aa11.46□□□□□ -0.57
MTND4P28-201ENST00000426217 ANKK1Q8NFD2 765 aa11.45□□□□□ -0.58
MTND4P28-201ENST00000426217 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
MTND4P28-201ENST00000426217 MFSD10Q14728 455 aa11.44□□□□□ -0.58
MTND4P28-201ENST00000426217 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
MTND4P28-201ENST00000426217 MAP3K9P80192 1104 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms