RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
SSBP3-207ENST00000426150 ZMYND10O75800 440 aa12.31□□□□□ -0.44
SSBP3-207ENST00000426150 CLCN6P51797 869 aa12.28□□□□□ -0.44
SSBP3-207ENST00000426150 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
SSBP3-207ENST00000426150 GABBR2O75899 941 aa12.26□□□□□ -0.45
SSBP3-207ENST00000426150 MLLT3P42568 568 aaPredicted RBP12.26□□□□□ -0.45
SSBP3-207ENST00000426150 NEUROD2Q15784 382 aa12.26□□□□□ -0.45
SSBP3-207ENST00000426150 MICALL2Q8IY33 904 aa12.26□□□□□ -0.45
SSBP3-207ENST00000426150 ATN1P54259 1190 aaPredicted RBP12.25□□□□□ -0.45
SSBP3-207ENST00000426150 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
SSBP3-207ENST00000426150 DSG2Q14126 1118 aa12.24□□□□□ -0.45
SSBP3-207ENST00000426150 BARGINQ6ZT62 677 aa12.24□□□□□ -0.45
SSBP3-207ENST00000426150 ERICH6Q7L0X2 663 aa12.24□□□□□ -0.45
SSBP3-207ENST00000426150 EMILIN3Q9NT22 766 aa12.24□□□□□ -0.45
SSBP3-207ENST00000426150 DPYSL4O14531 572 aa12.23□□□□□ -0.45
SSBP3-207ENST00000426150 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
SSBP3-207ENST00000426150 ASTLQ6HA08 431 aaPredicted RBP12.23□□□□□ -0.45
SSBP3-207ENST00000426150 PDCD7Q8N8D1 485 aaKnown RBP12.23□□□□□ -0.45
SSBP3-207ENST00000426150 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
SSBP3-207ENST00000426150 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
SSBP3-207ENST00000426150 GPIHBP1Q8IV16 184 aa12.2□□□□□ -0.46
SSBP3-207ENST00000426150 FOXK1P85037 733 aa12.19□□□□□ -0.46
SSBP3-207ENST00000426150 PDIA6Q15084 440 aa12.19□□□□□ -0.46
SSBP3-207ENST00000426150 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-207ENST00000426150 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
SSBP3-207ENST00000426150 TMEM121BQ9BXQ6 578 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-207ENST00000426150 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
SSBP3-207ENST00000426150 IER5LQ5T953 404 aa12.14□□□□□ -0.47
SSBP3-207ENST00000426150 PLPP6Q8IY26 295 aa12.14□□□□□ -0.47
SSBP3-207ENST00000426150 AK7Q96M32 723 aa12.14□□□□□ -0.47
SSBP3-207ENST00000426150 BOLA1Q9Y3E2 137 aa12.14□□□□□ -0.47
SSBP3-207ENST00000426150 NISCHQ9Y2I1 1504 aa12.12□□□□□ -0.47
SSBP3-207ENST00000426150 C2orf72A6NCS6 295 aa12.12□□□□□ -0.47
SSBP3-207ENST00000426150 KIF3CO14782 793 aa12.11□□□□□ -0.47
SSBP3-207ENST00000426150 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
SSBP3-207ENST00000426150 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
SSBP3-207ENST00000426150 G3V3G9 751 aa12.1□□□□□ -0.47
SSBP3-207ENST00000426150 C14orf37Q86TY3 774 aa12.09□□□□□ -0.47
SSBP3-207ENST00000426150 PLCG2P16885 1265 aa12.06□□□□□ -0.48
SSBP3-207ENST00000426150 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
SSBP3-207ENST00000426150 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
SSBP3-207ENST00000426150 MAP3K9P80192 1104 aa12.05□□□□□ -0.48
SSBP3-207ENST00000426150 GPR37O15354 613 aa12.04□□□□□ -0.48
SSBP3-207ENST00000426150 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
SSBP3-207ENST00000426150 L3MBTL3Q96JM7 780 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-207ENST00000426150 COLQQ9Y215 455 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-207ENST00000426150 GRXCR2A6NFK2 248 aa12.02□□□□□ -0.49
SSBP3-207ENST00000426150 TRIM66O15016 1216 aa12.02□□□□□ -0.49
SSBP3-207ENST00000426150 DCBLD2Q96PD2 775 aa12.02□□□□□ -0.49
SSBP3-207ENST00000426150 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
SSBP3-207ENST00000426150 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
SSBP3-207ENST00000426150 PDE4DQ08499 809 aa11.99□□□□□ -0.49
SSBP3-207ENST00000426150 KDM4CQ9H3R0 1056 aa11.99□□□□□ -0.49
SSBP3-207ENST00000426150 OXER1Q8TDS5 423 aa11.98□□□□□ -0.49
SSBP3-207ENST00000426150 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
SSBP3-207ENST00000426150 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
SSBP3-207ENST00000426150 OSBPP22059 807 aa11.95□□□□□ -0.5
SSBP3-207ENST00000426150 PTGER2P43116 358 aa11.95□□□□□ -0.5
SSBP3-207ENST00000426150 MINK1Q8N4C8 1332 aaPredicted RBP11.94□□□□□ -0.5
SSBP3-207ENST00000426150 SEC24BO95487 1268 aa11.94□□□□□ -0.5
SSBP3-207ENST00000426150 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
SSBP3-207ENST00000426150 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
SSBP3-207ENST00000426150 C7P10643 843 aa11.92□□□□□ -0.5
SSBP3-207ENST00000426150 DDX12PQ92771 950 aa11.92□□□□□ -0.5
SSBP3-207ENST00000426150 METRNQ9UJH8 293 aa11.92□□□□□ -0.5
SSBP3-207ENST00000426150 TBC1D12O60347 775 aa11.91□□□□□ -0.5
SSBP3-207ENST00000426150 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
SSBP3-207ENST00000426150 CCDC102AQ96A19 550 aa11.9□□□□□ -0.5
SSBP3-207ENST00000426150 IRF6O14896 467 aa11.89□□□□□ -0.51
SSBP3-207ENST00000426150 GNPATO15228 680 aa11.89□□□□□ -0.51
SSBP3-207ENST00000426150 EVI5O60447 810 aa11.88□□□□□ -0.51
SSBP3-207ENST00000426150 FCHSD2O94868 740 aa11.88□□□□□ -0.51
SSBP3-207ENST00000426150 HIC1Q14526 733 aa11.88□□□□□ -0.51
SSBP3-207ENST00000426150 PRIM1P49642 420 aaKnown RBP11.86□□□□□ -0.51
SSBP3-207ENST00000426150 AMHR2Q16671 573 aa11.85□□□□□ -0.51
SSBP3-207ENST00000426150 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
SSBP3-207ENST00000426150 FECHP22830 423 aa11.84□□□□□ -0.51
SSBP3-207ENST00000426150 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
SSBP3-207ENST00000426150 ARXQ96QS3 562 aa11.83□□□□□ -0.52
SSBP3-207ENST00000426150 FAM117AQ9C073 453 aa11.83□□□□□ -0.52
SSBP3-207ENST00000426150 C3orf67Q6ZVT6 689 aa11.82□□□□□ -0.52
SSBP3-207ENST00000426150 PTGDRQ13258 359 aa11.81□□□□□ -0.52
SSBP3-207ENST00000426150 PARP9Q8IXQ6 854 aa11.81□□□□□ -0.52
SSBP3-207ENST00000426150 SLC34A2O95436 690 aa11.8□□□□□ -0.52
SSBP3-207ENST00000426150 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
SSBP3-207ENST00000426150 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
SSBP3-207ENST00000426150 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
SSBP3-207ENST00000426150 POTEJP0CG39 1038 aa11.77□□□□□ -0.53
SSBP3-207ENST00000426150 POTEB2H3BUK9 544 aa11.74□□□□□ -0.53
SSBP3-207ENST00000426150 SUPT5HO00267 1087 aaKnown RBP11.74□□□□□ -0.53
SSBP3-207ENST00000426150 TTLL12Q14166 644 aaPredicted RBP11.74□□□□□ -0.53
SSBP3-207ENST00000426150 PHF14O94880 888 aa11.73□□□□□ -0.53
SSBP3-207ENST00000426150 EN1Q05925 392 aaPredicted RBP11.73□□□□□ -0.53
SSBP3-207ENST00000426150 EPAS1Q99814 870 aa11.73□□□□□ -0.53
SSBP3-207ENST00000426150 CDHR5Q9HBB8 845 aa11.72□□□□□ -0.53
SSBP3-207ENST00000426150 NPDC1Q9NQX5 325 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-207ENST00000426150 MAP3K7O43318 606 aa11.7□□□□□ -0.54
SSBP3-207ENST00000426150 GIGYF2Q6Y7W6 1299 aaKnown RBP11.68□□□□□ -0.54
SSBP3-207ENST00000426150 PCDHGA10Q9Y5H3 936 aa11.68□□□□□ -0.54
SSBP3-207ENST00000426150 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms