RNA–Protein interactions for RNA: ENST00000425184.5

RBM39-210, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-210ENST00000425184 CFAP44Q96MT7 982 aa10.52□□□□□ -0.73
RBM39-210ENST00000425184 C2orf72A6NCS6 295 aa10.51□□□□□ -0.73
RBM39-210ENST00000425184 FAM163AQ96GL9 167 aaPredicted RBP10.51□□□□□ -0.73
RBM39-210ENST00000425184 KIF3CO14782 793 aa10.5□□□□□ -0.73
RBM39-210ENST00000425184 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
RBM39-210ENST00000425184 GPHNQ9NQX3 736 aaPredicted RBP10.47□□□□□ -0.73
RBM39-210ENST00000425184 HOXB3P14651 431 aaPredicted RBP10.45□□□□□ -0.74
RBM39-210ENST00000425184 ST18O60284 1047 aa10.44□□□□□ -0.74
RBM39-210ENST00000425184 PDE4AP27815 886 aa10.43□□□□□ -0.74
RBM39-210ENST00000425184 ZNF710Q8N1W2 664 aa10.43□□□□□ -0.74
RBM39-210ENST00000425184 CRISPLD2Q9H0B8 497 aa10.43□□□□□ -0.74
RBM39-210ENST00000425184 NCKAP5LQ9HCH0 1330 aa10.42□□□□□ -0.74
RBM39-210ENST00000425184 RIMBP2O15034 1052 aa10.42□□□□□ -0.74
RBM39-210ENST00000425184 FOXK1P85037 733 aa10.42□□□□□ -0.74
RBM39-210ENST00000425184 LCE2DQ5TA82 110 aaPredicted RBP10.41□□□□□ -0.74
RBM39-210ENST00000425184 CADPS2Q86UW7 1296 aa10.41□□□□□ -0.74
RBM39-210ENST00000425184 DSG2Q14126 1118 aa10.4□□□□□ -0.74
RBM39-210ENST00000425184 PLPP6Q8IY26 295 aa10.39□□□□□ -0.75
RBM39-210ENST00000425184 LARP6Q9BRS8 491 aaKnown RBP10.39□□□□□ -0.75
RBM39-210ENST00000425184 ZSWIM6Q9HCJ5 1215 aa10.38□□□□□ -0.75
RBM39-210ENST00000425184 PPP1R15BQ5SWA1 713 aa10.36□□□□□ -0.75
RBM39-210ENST00000425184 DDX27Q96GQ7 796 aaKnown RBP10.36□□□□□ -0.75
RBM39-210ENST00000425184 SLC34A2O95436 690 aa10.35□□□□□ -0.75
RBM39-210ENST00000425184 PLCB2Q00722 1185 aa10.35□□□□□ -0.75
RBM39-210ENST00000425184 MFSD10Q14728 455 aa10.34□□□□□ -0.75
RBM39-210ENST00000425184 POTEMA6NI47 508 aa10.33□□□□□ -0.76
RBM39-210ENST00000425184 HOXB1P14653 301 aaPredicted RBP10.33□□□□□ -0.76
RBM39-210ENST00000425184 POTEGQ6S5H5 508 aa10.33□□□□□ -0.76
RBM39-210ENST00000425184 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
RBM39-210ENST00000425184 EMP3P54852 163 aa10.31□□□□□ -0.76
RBM39-210ENST00000425184 GPR153Q6NV75 609 aa10.31□□□□□ -0.76
RBM39-210ENST00000425184 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
RBM39-210ENST00000425184 TSHZ2Q9NRE2 1034 aa10.3□□□□□ -0.76
RBM39-210ENST00000425184 PTCD2Q8WV60 388 aaKnown RBP10.29□□□□□ -0.76
RBM39-210ENST00000425184 PCDHGA4Q9Y5G9 962 aa10.29□□□□□ -0.76
RBM39-210ENST00000425184 TBC1D12O60347 775 aa10.27□□□□□ -0.77
RBM39-210ENST00000425184 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.772e-10■■□□□ 13.4
RBM39-210ENST00000425184 WDR70Q9NW82 654 aa10.25□□□□□ -0.77
RBM39-210ENST00000425184 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
RBM39-210ENST00000425184 UPF1Q92900 1129 aaKnown RBP eCLIP10.24□□□□□ -0.77
RBM39-210ENST00000425184 FAM205CA6NFA0 338 aa10.23□□□□□ -0.77
RBM39-210ENST00000425184 NUDT7P0C024 238 aa10.23□□□□□ -0.77
RBM39-210ENST00000425184 ERBB3P21860 1342 aa10.23□□□□□ -0.77
RBM39-210ENST00000425184 CAMK2BQ13554 666 aa10.21□□□□□ -0.77
RBM39-210ENST00000425184 HAP1P54257 671 aaPredicted RBP10.2□□□□□ -0.78
RBM39-210ENST00000425184 HS3ST6Q96QI5 342 aa10.2□□□□□ -0.78
RBM39-210ENST00000425184 EMILIN3Q9NT22 766 aa10.2□□□□□ -0.78
RBM39-210ENST00000425184 ZNF316A6NFI3 1004 aaPredicted RBP10.18□□□□□ -0.78
RBM39-210ENST00000425184 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
RBM39-210ENST00000425184 E2F4Q16254 413 aa10.18□□□□□ -0.78
RBM39-210ENST00000425184 VARS2Q5ST30 1063 aaKnown RBP10.18□□□□□ -0.78
RBM39-210ENST00000425184 PCDH10Q9P2E7 1040 aa10.18□□□□□ -0.78
RBM39-210ENST00000425184 KDM4FA0A1W2PPD8 638 aa10.17□□□□□ -0.78
RBM39-210ENST00000425184 CDAN1Q8IWY9 1227 aa10.16□□□□□ -0.78
RBM39-210ENST00000425184 LHX6Q9UPM6 363 aa10.16□□□□□ -0.78
RBM39-210ENST00000425184 POTEB3A0JP26 581 aa10.15□□□□□ -0.78
RBM39-210ENST00000425184 POTEBQ6S5H4 581 aa10.15□□□□□ -0.78
RBM39-210ENST00000425184 PSDA5PKW4 1024 aaPredicted RBP10.14□□□□□ -0.79
RBM39-210ENST00000425184 EVI5O60447 810 aa10.13□□□□□ -0.79
RBM39-210ENST00000425184 DPYSL4O14531 572 aa10.12□□□□□ -0.79
RBM39-210ENST00000425184 ANO8Q9HCE9 1232 aaPredicted RBP10.1□□□□□ -0.79
RBM39-210ENST00000425184 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
RBM39-210ENST00000425184 PPP4R3BQ5MIZ7 849 aa10.07□□□□□ -0.8
RBM39-210ENST00000425184 ARIH1Q9Y4X5 557 aaPredicted RBP10.07□□□□□ -0.8
RBM39-210ENST00000425184 SPDYE16A6NNV3 312 aaPredicted RBP10.05□□□□□ -0.8
RBM39-210ENST00000425184 PDIA6Q15084 440 aa10.05□□□□□ -0.8
RBM39-210ENST00000425184 ZNF454Q8N9F8 522 aa10.05□□□□□ -0.8
RBM39-210ENST00000425184 P3H3Q8IVL6 736 aa10.04□□□□□ -0.8
RBM39-210ENST00000425184 VSIG10Q8N0Z9 540 aa10.04□□□□□ -0.8
RBM39-210ENST00000425184 JPH4Q96JJ6 628 aa10.04□□□□□ -0.8
RBM39-210ENST00000425184 PBX2P40425 430 aa10.03□□□□□ -0.8
RBM39-210ENST00000425184 FOSBP53539 338 aa10.03□□□□□ -0.8
RBM39-210ENST00000425184 KCNV2Q8TDN2 545 aa10.03□□□□□ -0.8
RBM39-210ENST00000425184 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
RBM39-210ENST00000425184 KRTAP3-3Q9BYR6 98 aa10.02□□□□□ -0.81
RBM39-210ENST00000425184 KRTAP3-2Q9BYR7 98 aa10.02□□□□□ -0.81
RBM39-210ENST00000425184 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
RBM39-210ENST00000425184 PTGER2P43116 358 aa9.99□□□□□ -0.81
RBM39-210ENST00000425184 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
RBM39-210ENST00000425184 PHF14O94880 888 aa9.98□□□□□ -0.81
RBM39-210ENST00000425184 ZDHHC16Q969W1 377 aa9.98□□□□□ -0.81
RBM39-210ENST00000425184 KCNH8Q96L42 1107 aa9.98□□□□□ -0.81
RBM39-210ENST00000425184 PCDHGA10Q9Y5H3 936 aa9.98□□□□□ -0.81
RBM39-210ENST00000425184 TYW1BQ6NUM6 668 aa9.97□□□□□ -0.81
RBM39-210ENST00000425184 DDX12PQ92771 950 aa9.97□□□□□ -0.81
RBM39-210ENST00000425184 FBXW7Q969H0 707 aa9.97□□□□□ -0.81
RBM39-210ENST00000425184 BCL2L12Q9HB09 334 aa9.97□□□□□ -0.81
RBM39-210ENST00000425184 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.82
RBM39-210ENST00000425184 EPAS1Q99814 870 aa9.96□□□□□ -0.82
RBM39-210ENST00000425184 AXIN2Q9Y2T1 843 aa9.96□□□□□ -0.82
RBM39-210ENST00000425184 KCNK17Q96T54 332 aa9.95□□□□□ -0.82
RBM39-210ENST00000425184 PTPREP23469 700 aa9.94□□□□□ -0.82
RBM39-210ENST00000425184 LSM11P83369 360 aaKnown RBP eCLIP9.94□□□□□ -0.821e-13■□□□□ 8.6
RBM39-210ENST00000425184 ADAM33Q9BZ11 813 aa9.94□□□□□ -0.82
RBM39-210ENST00000425184 PSEN2P49810 448 aa9.93□□□□□ -0.82
RBM39-210ENST00000425184 ANKRD13DQ6ZTN6 518 aa9.93□□□□□ -0.82
RBM39-210ENST00000425184 GRXCR2A6NFK2 248 aa9.92□□□□□ -0.82
RBM39-210ENST00000425184 NBR1Q14596 966 aa9.92□□□□□ -0.82
RBM39-210ENST00000425184 DMRTA1Q5VZB9 504 aa9.89□□□□□ -0.83
RBM39-210ENST00000425184 SPNS2Q8IVW8 549 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms