RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.75□□□□□ -0.85
HDAC9-209ENST00000425071 SCUBE2Q9NQ36 999 aa9.74□□□□□ -0.85
HDAC9-209ENST00000425071 TMC2Q8TDI7 906 aa9.72□□□□□ -0.85
HDAC9-209ENST00000425071 CRISPLD2Q9H0B8 497 aa9.72□□□□□ -0.85
HDAC9-209ENST00000425071 POTEJP0CG39 1038 aa9.71□□□□□ -0.86
HDAC9-209ENST00000425071 CADPS2Q86UW7 1296 aa9.71□□□□□ -0.86
HDAC9-209ENST00000425071 GPHNQ9NQX3 736 aaPredicted RBP9.71□□□□□ -0.86
HDAC9-209ENST00000425071 WDR70Q9NW82 654 aa9.7□□□□□ -0.86
HDAC9-209ENST00000425071 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
HDAC9-209ENST00000425071 KIF3CO14782 793 aa9.68□□□□□ -0.86
HDAC9-209ENST00000425071 MFSD10Q14728 455 aa9.67□□□□□ -0.86
HDAC9-209ENST00000425071 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
HDAC9-209ENST00000425071 FOXK1P85037 733 aa9.66□□□□□ -0.86
HDAC9-209ENST00000425071 DDX27Q96GQ7 796 aaKnown RBP9.66□□□□□ -0.86
HDAC9-209ENST00000425071 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
HDAC9-209ENST00000425071 C2orf72A6NCS6 295 aa9.64□□□□□ -0.87
HDAC9-209ENST00000425071 TMEM92Q6UXU6 159 aa9.63□□□□□ -0.87
HDAC9-209ENST00000425071 SLAIN1Q8ND83 568 aa9.62□□□□□ -0.87
HDAC9-209ENST00000425071 PPP1R15BQ5SWA1 713 aa9.61□□□□□ -0.87
HDAC9-209ENST00000425071 DSG2Q14126 1118 aa9.6□□□□□ -0.87
HDAC9-209ENST00000425071 P3H3Q8IVL6 736 aa9.6□□□□□ -0.87
HDAC9-209ENST00000425071 E2F4Q16254 413 aa9.58□□□□□ -0.88
HDAC9-209ENST00000425071 PLPP6Q8IY26 295 aa9.58□□□□□ -0.88
HDAC9-209ENST00000425071 SNPHO15079 494 aa9.57□□□□□ -0.88
HDAC9-209ENST00000425071 CAMK2BQ13554 666 aa9.56□□□□□ -0.88
HDAC9-209ENST00000425071 SLC34A2O95436 690 aa9.55□□□□□ -0.88
HDAC9-209ENST00000425071 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
HDAC9-209ENST00000425071 DOK7Q18PE1 504 aa9.53□□□□□ -0.88
HDAC9-209ENST00000425071 RIMBP2O15034 1052 aa9.52□□□□□ -0.89
HDAC9-209ENST00000425071 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
HDAC9-209ENST00000425071 TBC1D12O60347 775 aa9.51□□□□□ -0.89
HDAC9-209ENST00000425071 ZSWIM6Q9HCJ5 1215 aa9.51□□□□□ -0.89
HDAC9-209ENST00000425071 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
HDAC9-209ENST00000425071 POTEMA6NI47 508 aa9.49□□□□□ -0.89
HDAC9-209ENST00000425071 POTEGQ6S5H5 508 aa9.48□□□□□ -0.89
HDAC9-209ENST00000425071 KCNV2Q8TDN2 545 aa9.48□□□□□ -0.89
HDAC9-209ENST00000425071 FAM163AQ96GL9 167 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-209ENST00000425071 OXER1Q8TDS5 423 aa9.47□□□□□ -0.89
HDAC9-209ENST00000425071 HOXB3P14651 431 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-209ENST00000425071 MAP3K9P80192 1104 aa9.45□□□□□ -0.9
HDAC9-209ENST00000425071 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
HDAC9-209ENST00000425071 EMILIN3Q9NT22 766 aa9.45□□□□□ -0.9
HDAC9-209ENST00000425071 SPDYE16A6NNV3 312 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-209ENST00000425071 ZNF316A6NFI3 1004 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-209ENST00000425071 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-209ENST00000425071 PCDHGA4Q9Y5G9 962 aa9.41□□□□□ -0.9
HDAC9-209ENST00000425071 DPYSL4O14531 572 aa9.4□□□□□ -0.9
HDAC9-209ENST00000425071 UPF1Q92900 1129 aaKnown RBP eCLIP9.4□□□□□ -0.9
HDAC9-209ENST00000425071 NBR1Q14596 966 aa9.39□□□□□ -0.91
HDAC9-209ENST00000425071 PDIA6Q15084 440 aa9.39□□□□□ -0.91
HDAC9-209ENST00000425071 GPR153Q6NV75 609 aa9.39□□□□□ -0.91
HDAC9-209ENST00000425071 BCANQ96GW7 911 aa9.39□□□□□ -0.91
HDAC9-209ENST00000425071 ANO8Q9HCE9 1232 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-209ENST00000425071 HOXB1P14653 301 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-209ENST00000425071 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
HDAC9-209ENST00000425071 EVI5O60447 810 aa9.36□□□□□ -0.91
HDAC9-209ENST00000425071 PTGER2P43116 358 aa9.35□□□□□ -0.91
HDAC9-209ENST00000425071 ARSIQ5FYB1 569 aa9.35□□□□□ -0.91
HDAC9-209ENST00000425071 KDM4FA0A1W2PPD8 638 aa9.34□□□□□ -0.91
HDAC9-209ENST00000425071 PCDH10Q9P2E7 1040 aa9.34□□□□□ -0.91
HDAC9-209ENST00000425071 PSDA5PKW4 1024 aaPredicted RBP9.33□□□□□ -0.92
HDAC9-209ENST00000425071 SMYD5Q6GMV2 418 aa9.33□□□□□ -0.92
HDAC9-209ENST00000425071 TULP1O00294 542 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-209ENST00000425071 ST18O60284 1047 aa9.32□□□□□ -0.92
HDAC9-209ENST00000425071 NUDT7P0C024 238 aa9.31□□□□□ -0.92
HDAC9-209ENST00000425071 TESPA1A2RU30 521 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-209ENST00000425071 SEMA3EO15041 775 aa9.28□□□□□ -0.92
HDAC9-209ENST00000425071 PHF14O94880 888 aa9.27□□□□□ -0.93
HDAC9-209ENST00000425071 KHSRPQ92945 711 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC9-209ENST00000425071 JPH4Q96JJ6 628 aa9.27□□□□□ -0.93
HDAC9-209ENST00000425071 EPAS1Q99814 870 aa9.27□□□□□ -0.93
HDAC9-209ENST00000425071 FBXW7Q969H0 707 aa9.25□□□□□ -0.93
HDAC9-209ENST00000425071 LHX6Q9UPM6 363 aa9.25□□□□□ -0.93
HDAC9-209ENST00000425071 FOSBP53539 338 aa9.24□□□□□ -0.93
HDAC9-209ENST00000425071 EMP3P54852 163 aa9.23□□□□□ -0.93
HDAC9-209ENST00000425071 PPP4R3BQ5MIZ7 849 aa9.23□□□□□ -0.93
HDAC9-209ENST00000425071 TYW1BQ6NUM6 668 aa9.23□□□□□ -0.93
HDAC9-209ENST00000425071 ERBB3P21860 1342 aa9.23□□□□□ -0.93
HDAC9-209ENST00000425071 GRXCR2A6NFK2 248 aa9.22□□□□□ -0.93
HDAC9-209ENST00000425071 CDAN1Q8IWY9 1227 aa9.22□□□□□ -0.93
HDAC9-209ENST00000425071 DDX12PQ92771 950 aa9.22□□□□□ -0.93
HDAC9-209ENST00000425071 MLLT3P42568 568 aaPredicted RBP9.21□□□□□ -0.94
HDAC9-209ENST00000425071 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
HDAC9-209ENST00000425071 PCDHGA10Q9Y5H3 936 aa9.21□□□□□ -0.94
HDAC9-209ENST00000425071 ZDHHC16Q969W1 377 aa9.2□□□□□ -0.94
HDAC9-209ENST00000425071 OSBPP22059 807 aa9.19□□□□□ -0.94
HDAC9-209ENST00000425071 MARVELD3Q96A59 401 aa9.19□□□□□ -0.94
HDAC9-209ENST00000425071 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDAC9-209ENST00000425071 EN1Q05925 392 aaPredicted RBP9.17□□□□□ -0.94
HDAC9-209ENST00000425071 BCL2L12Q9HB09 334 aa9.17□□□□□ -0.94
HDAC9-209ENST00000425071 FAM205CA6NFA0 338 aa9.16□□□□□ -0.94
HDAC9-209ENST00000425071 VARS2Q5ST30 1063 aaKnown RBP9.16□□□□□ -0.94
HDAC9-209ENST00000425071 PBX2P40425 430 aa9.15□□□□□ -0.94
HDAC9-209ENST00000425071 ZNF687Q8N1G0 1237 aa9.15□□□□□ -0.94
HDAC9-209ENST00000425071 KCNH8Q96L42 1107 aa9.15□□□□□ -0.94
HDAC9-209ENST00000425071 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
HDAC9-209ENST00000425071 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
HDAC9-209ENST00000425071 MAP3K7O43318 606 aa9.13□□□□□ -0.95
HDAC9-209ENST00000425071 PTPREP23469 700 aa9.13□□□□□ -0.95
HDAC9-209ENST00000425071 CERKQ8TCT0 537 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms