RNA–Protein interactions for RNA: ENST00000425021.1

LINC00494-202, long intergenic non-protein coding RNA 494, humanhuman

TSL 2

Gene LINC00494, Length 438 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-202ENST00000425021 FBXO22Q8NEZ5 403 aa13.28□□□□□ -0.28
LINC00494-202ENST00000425021 MFRPQ9BY79 579 aa13.28□□□□□ -0.28
LINC00494-202ENST00000425021 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
LINC00494-202ENST00000425021 UNC13AQ9UPW8 1703 aa13.22□□□□□ -0.29
LINC00494-202ENST00000425021 HS6ST3Q8IZP7 471 aa13.21□□□□□ -0.29
LINC00494-202ENST00000425021 DOK7Q18PE1 504 aa13.2□□□□□ -0.3
LINC00494-202ENST00000425021 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
LINC00494-202ENST00000425021 CHGAP10645 457 aaKnown RBP13.18□□□□□ -0.3
LINC00494-202ENST00000425021 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
LINC00494-202ENST00000425021 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
LINC00494-202ENST00000425021 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
LINC00494-202ENST00000425021 EMP3P54852 163 aa13.16□□□□□ -0.3
LINC00494-202ENST00000425021 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
LINC00494-202ENST00000425021 TMEM92Q6UXU6 159 aa13.15□□□□□ -0.3
LINC00494-202ENST00000425021 HOXB1P14653 301 aaPredicted RBP13.07□□□□□ -0.32
LINC00494-202ENST00000425021 ZSWIM6Q9HCJ5 1215 aa13.06□□□□□ -0.32
LINC00494-202ENST00000425021 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
LINC00494-202ENST00000425021 BICRAQ9NZM4 1560 aa13.06□□□□□ -0.32
LINC00494-202ENST00000425021 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
LINC00494-202ENST00000425021 TMC2Q8TDI7 906 aa13.05□□□□□ -0.32
LINC00494-202ENST00000425021 PPP1R37O75864 691 aa13.04□□□□□ -0.32
LINC00494-202ENST00000425021 PLCB2Q00722 1185 aa13.04□□□□□ -0.32
LINC00494-202ENST00000425021 SCRIBQ14160 1630 aa13.02□□□□□ -0.32
LINC00494-202ENST00000425021 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
LINC00494-202ENST00000425021 HS3ST6Q96QI5 342 aa13.02□□□□□ -0.33
LINC00494-202ENST00000425021 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
LINC00494-202ENST00000425021 ERBB3P21860 1342 aa12.99□□□□□ -0.33
LINC00494-202ENST00000425021 KIF3CO14782 793 aa12.99□□□□□ -0.33
LINC00494-202ENST00000425021 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
LINC00494-202ENST00000425021 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
LINC00494-202ENST00000425021 GPR153Q6NV75 609 aa12.94□□□□□ -0.34
LINC00494-202ENST00000425021 HAP1P54257 671 aaPredicted RBP12.92□□□□□ -0.34
LINC00494-202ENST00000425021 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
LINC00494-202ENST00000425021 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
LINC00494-202ENST00000425021 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
LINC00494-202ENST00000425021 VARS2Q5ST30 1063 aaKnown RBP12.9□□□□□ -0.34
LINC00494-202ENST00000425021 SLC34A2O95436 690 aa12.86□□□□□ -0.35
LINC00494-202ENST00000425021 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
LINC00494-202ENST00000425021 FOXK1P85037 733 aa12.84□□□□□ -0.35
LINC00494-202ENST00000425021 KHSRPQ92945 711 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00494-202ENST00000425021 KRTAP3-3Q9BYR6 98 aa12.83□□□□□ -0.36
LINC00494-202ENST00000425021 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
LINC00494-202ENST00000425021 PCDHGA4Q9Y5G9 962 aa12.83□□□□□ -0.36
LINC00494-202ENST00000425021 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
LINC00494-202ENST00000425021 ZNF316A6NFI3 1004 aaPredicted RBP12.81□□□□□ -0.36
LINC00494-202ENST00000425021 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
LINC00494-202ENST00000425021 PLPP6Q8IY26 295 aa12.81□□□□□ -0.36
LINC00494-202ENST00000425021 NUDT7P0C024 238 aa12.8□□□□□ -0.36
LINC00494-202ENST00000425021 ZNF687Q8N1G0 1237 aa12.79□□□□□ -0.36
LINC00494-202ENST00000425021 DSG2Q14126 1118 aa12.78□□□□□ -0.36
LINC00494-202ENST00000425021 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
LINC00494-202ENST00000425021 PTCD2Q8WV60 388 aaKnown RBP12.75□□□□□ -0.37
LINC00494-202ENST00000425021 TBC1D12O60347 775 aa12.74□□□□□ -0.37
LINC00494-202ENST00000425021 PDE4AP27815 886 aa12.74□□□□□ -0.37
LINC00494-202ENST00000425021 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
LINC00494-202ENST00000425021 LHX6Q9UPM6 363 aa12.72□□□□□ -0.37
LINC00494-202ENST00000425021 EIF4G1Q04637 1599 aaKnown RBP12.71□□□□□ -0.37
LINC00494-202ENST00000425021 PPP1R15BQ5SWA1 713 aa12.7□□□□□ -0.38
LINC00494-202ENST00000425021 PSDA5PKW4 1024 aaPredicted RBP12.69□□□□□ -0.38
LINC00494-202ENST00000425021 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
LINC00494-202ENST00000425021 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
LINC00494-202ENST00000425021 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
LINC00494-202ENST00000425021 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
LINC00494-202ENST00000425021 BCANQ96GW7 911 aa12.67□□□□□ -0.38
LINC00494-202ENST00000425021 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
LINC00494-202ENST00000425021 PBX2P40425 430 aa12.66□□□□□ -0.38
LINC00494-202ENST00000425021 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.38
LINC00494-202ENST00000425021 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
LINC00494-202ENST00000425021 UPF1Q92900 1129 aaKnown RBP eCLIP12.63□□□□□ -0.39
LINC00494-202ENST00000425021 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
LINC00494-202ENST00000425021 KDM4FA0A1W2PPD8 638 aa12.61□□□□□ -0.39
LINC00494-202ENST00000425021 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
LINC00494-202ENST00000425021 LSM11P83369 360 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00494-202ENST00000425021 PTGER2P43116 358 aa12.59□□□□□ -0.39
LINC00494-202ENST00000425021 PAXIP1Q6ZW49 1069 aaPredicted RBP12.59□□□□□ -0.39
LINC00494-202ENST00000425021 PPP4R3BQ5MIZ7 849 aa12.58□□□□□ -0.4
LINC00494-202ENST00000425021 MFSD10Q14728 455 aa12.57□□□□□ -0.4
LINC00494-202ENST00000425021 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
LINC00494-202ENST00000425021 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
LINC00494-202ENST00000425021 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
LINC00494-202ENST00000425021 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
LINC00494-202ENST00000425021 CECR2Q9BXF3 1484 aa12.54□□□□□ -0.4
LINC00494-202ENST00000425021 ARHGAP33O14559 1287 aa12.54□□□□□ -0.4
LINC00494-202ENST00000425021 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
LINC00494-202ENST00000425021 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
LINC00494-202ENST00000425021 KCNH8Q96L42 1107 aa12.54□□□□□ -0.4
LINC00494-202ENST00000425021 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
LINC00494-202ENST00000425021 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
LINC00494-202ENST00000425021 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
LINC00494-202ENST00000425021 ZNF454Q8N9F8 522 aa12.49□□□□□ -0.41
LINC00494-202ENST00000425021 EVI5O60447 810 aa12.48□□□□□ -0.41
LINC00494-202ENST00000425021 KDM2AQ9Y2K7 1162 aa12.48□□□□□ -0.41
LINC00494-202ENST00000425021 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
LINC00494-202ENST00000425021 PRKCSHP14314 528 aaPredicted RBP12.46□□□□□ -0.41
LINC00494-202ENST00000425021 PSEN2P49810 448 aa12.44□□□□□ -0.42
LINC00494-202ENST00000425021 ADGRD1Q6QNK2 874 aa12.44□□□□□ -0.42
LINC00494-202ENST00000425021 KCNK17Q96T54 332 aa12.44□□□□□ -0.42
LINC00494-202ENST00000425021 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
LINC00494-202ENST00000425021 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
LINC00494-202ENST00000425021 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms