RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 PDE4CQ08493 712 aa9.17□□□□□ -0.94
LINC00240-202ENST00000424968 SERPINA10Q9UK55 444 aa9.17□□□□□ -0.94
LINC00240-202ENST00000424968 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
LINC00240-202ENST00000424968 CCDC97Q96F63 343 aaPredicted RBP9.16□□□□□ -0.94
LINC00240-202ENST00000424968 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
LINC00240-202ENST00000424968 RAD21O60216 631 aa9.15□□□□□ -0.94
LINC00240-202ENST00000424968 MFSD10Q14728 455 aa9.15□□□□□ -0.94
LINC00240-202ENST00000424968 NECTIN2Q92692 538 aa9.15□□□□□ -0.94
LINC00240-202ENST00000424968 SHROOM4Q9ULL8 1493 aa9.15□□□□□ -0.95
LINC00240-202ENST00000424968 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
LINC00240-202ENST00000424968 HMGB1P09429 215 aaKnown RBP9.14□□□□□ -0.95
LINC00240-202ENST00000424968 RBM26Q5T8P6 1007 aaKnown RBP9.14□□□□□ -0.95
LINC00240-202ENST00000424968 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
LINC00240-202ENST00000424968 PATL2C9JE40 543 aaKnown RBP9.13□□□□□ -0.95
LINC00240-202ENST00000424968 PSEN1P49768 467 aa9.13□□□□□ -0.95
LINC00240-202ENST00000424968 TMCO4Q5TGY1 634 aa9.12□□□□□ -0.95
LINC00240-202ENST00000424968 PCMTD1Q96MG8 357 aaPredicted RBP9.12□□□□□ -0.95
LINC00240-202ENST00000424968 SPDYE16A6NNV3 312 aaPredicted RBP9.1□□□□□ -0.95
LINC00240-202ENST00000424968 CAMK2BQ13554 666 aa9.1□□□□□ -0.95
LINC00240-202ENST00000424968 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
LINC00240-202ENST00000424968 HAX1O00165 279 aa9.09□□□□□ -0.95
LINC00240-202ENST00000424968 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
LINC00240-202ENST00000424968 PPP1R37O75864 691 aa9.08□□□□□ -0.96
LINC00240-202ENST00000424968 AEBP1Q8IUX7 1158 aa9.08□□□□□ -0.96
LINC00240-202ENST00000424968 NCKAP5LQ9HCH0 1330 aa9.07□□□□□ -0.96
LINC00240-202ENST00000424968 FBXO22Q8NEZ5 403 aa9.07□□□□□ -0.96
LINC00240-202ENST00000424968 AMHR2Q16671 573 aa9.06□□□□□ -0.96
LINC00240-202ENST00000424968 PELP1Q8IZL8 1130 aaKnown RBP9.06□□□□□ -0.96
LINC00240-202ENST00000424968 CRISPLD2Q9H0B8 497 aa9.06□□□□□ -0.96
LINC00240-202ENST00000424968 PLEKHG3A1L390 1219 aa9.05□□□□□ -0.96
LINC00240-202ENST00000424968 MAP2K5Q13163 448 aa9.05□□□□□ -0.96
LINC00240-202ENST00000424968 ONECUT3O60422 494 aaPredicted RBP9.04□□□□□ -0.96
LINC00240-202ENST00000424968 PROSER2Q86WR7 435 aaPredicted RBP9.04□□□□□ -0.96
LINC00240-202ENST00000424968 MLLT3P42568 568 aaPredicted RBP9.03□□□□□ -0.96
LINC00240-202ENST00000424968 MYT1Q01538 1121 aa9.03□□□□□ -0.96
LINC00240-202ENST00000424968 CLUAP1Q96AJ1 413 aa9.03□□□□□ -0.96
LINC00240-202ENST00000424968 PCDHB8Q9UN66 801 aa9.02□□□□□ -0.97
LINC00240-202ENST00000424968 PCDHB13Q9Y5F0 798 aa9.02□□□□□ -0.97
LINC00240-202ENST00000424968 EFCAB3Q8N7B9 438 aa9.01□□□□□ -0.97
LINC00240-202ENST00000424968 RGS22Q8NE09 1264 aa9.01□□□□□ -0.97
LINC00240-202ENST00000424968 ACIN1Q9UKV3 1341 aaKnown RBP9.01□□□□□ -0.97
LINC00240-202ENST00000424968 PAK3O75914 559 aaPredicted RBP9□□□□□ -0.97
LINC00240-202ENST00000424968 TSPYL2Q9H2G4 693 aaPredicted RBP9□□□□□ -0.97
LINC00240-202ENST00000424968 PHF8Q9UPP1 1060 aa9□□□□□ -0.97
LINC00240-202ENST00000424968 IRF6O14896 467 aa8.99□□□□□ -0.97
LINC00240-202ENST00000424968 PPP1R15AO75807 674 aaPredicted RBP8.99□□□□□ -0.97
LINC00240-202ENST00000424968 MFAP1P55081 439 aaKnown RBP8.99□□□□□ -0.97
LINC00240-202ENST00000424968 TTLL12Q14166 644 aaPredicted RBP8.99□□□□□ -0.97
LINC00240-202ENST00000424968 CABP2Q9NPB3 220 aa8.99□□□□□ -0.97
LINC00240-202ENST00000424968 ZNF777Q9ULD5 760 aaPredicted RBP8.99□□□□□ -0.97
LINC00240-202ENST00000424968 E9PSI1 815 aa8.98□□□□□ -0.97
LINC00240-202ENST00000424968 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
LINC00240-202ENST00000424968 MCM6Q14566 821 aa8.98□□□□□ -0.97
LINC00240-202ENST00000424968 PARP9Q8IXQ6 854 aa8.98□□□□□ -0.97
LINC00240-202ENST00000424968 FBXW7Q969H0 707 aa8.98□□□□□ -0.97
LINC00240-202ENST00000424968 CCDC102AQ96A19 550 aa8.98□□□□□ -0.97
LINC00240-202ENST00000424968 WWC1Q8IX03 1113 aa8.97□□□□□ -0.97
LINC00240-202ENST00000424968 GZF1Q9H116 711 aaPredicted RBP8.97□□□□□ -0.97
LINC00240-202ENST00000424968 MTMR7Q9Y216 660 aa8.96□□□□□ -0.98
LINC00240-202ENST00000424968 NUTM2FA1L443 756 aa8.95□□□□□ -0.98
LINC00240-202ENST00000424968 RBM25P49756 843 aaKnown RBP8.95□□□□□ -0.98
LINC00240-202ENST00000424968 PDIA6Q15084 440 aa8.95□□□□□ -0.98
LINC00240-202ENST00000424968 C19orf67A6NJJ6 358 aa8.94□□□□□ -0.98
LINC00240-202ENST00000424968 GNPATO15228 680 aa8.93□□□□□ -0.98
LINC00240-202ENST00000424968 HIC1Q14526 733 aa8.93□□□□□ -0.98
LINC00240-202ENST00000424968 SH3D19Q5HYK7 790 aa8.93□□□□□ -0.98
LINC00240-202ENST00000424968 PPP1R15BQ5SWA1 713 aa8.93□□□□□ -0.98
LINC00240-202ENST00000424968 GOLGA2Q08379 1002 aa8.92□□□□□ -0.98
LINC00240-202ENST00000424968 ZRANB1Q9UGI0 708 aa8.92□□□□□ -0.98
LINC00240-202ENST00000424968 ATP1B4Q9UN42 357 aaPredicted RBP8.92□□□□□ -0.98
LINC00240-202ENST00000424968 FCHSD2O94868 740 aa8.91□□□□□ -0.98
LINC00240-202ENST00000424968 RETREG2Q8NC44 543 aa8.91□□□□□ -0.98
LINC00240-202ENST00000424968 GPR37O15354 613 aa8.9□□□□□ -0.98
LINC00240-202ENST00000424968 FNBP4Q8N3X1 1017 aaPredicted RBP8.9□□□□□ -0.98
LINC00240-202ENST00000424968 DPYSL4O14531 572 aa8.89□□□□□ -0.99
LINC00240-202ENST00000424968 HSP90B1P14625 803 aaKnown RBP8.89□□□□□ -0.99
LINC00240-202ENST00000424968 SPDYE5A6NIY4 337 aa8.88□□□□□ -0.99
LINC00240-202ENST00000424968 SKIV2LQ15477 1246 aaKnown RBP8.88□□□□□ -0.99
LINC00240-202ENST00000424968 PRM3Q9NNZ6 103 aa8.88□□□□□ -0.99
LINC00240-202ENST00000424968 GPHNQ9NQX3 736 aaPredicted RBP8.88□□□□□ -0.99
LINC00240-202ENST00000424968 TTBK1Q5TCY1 1321 aaPredicted RBP8.87□□□□□ -0.99
LINC00240-202ENST00000424968 LOC105371045A0A1W2PR82 267 aa8.87□□□□□ -0.99
LINC00240-202ENST00000424968 EVX2Q03828 476 aa8.87□□□□□ -0.99
LINC00240-202ENST00000424968 KCNA1Q09470 495 aa8.87□□□□□ -0.99
LINC00240-202ENST00000424968 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
LINC00240-202ENST00000424968 PLSCR2Q9NRY7 297 aa8.87□□□□□ -0.99
LINC00240-202ENST00000424968 ZNF330Q9Y3S2 320 aaPredicted RBP8.87□□□□□ -0.99
LINC00240-202ENST00000424968 AMOTL2Q9Y2J4 779 aa8.86□□□□□ -0.99
LINC00240-202ENST00000424968 SP7Q8TDD2 431 aaPredicted RBP8.85□□□□□ -0.99
LINC00240-202ENST00000424968 MYT1LQ9UL68 1186 aa8.85□□□□□ -0.99
LINC00240-202ENST00000424968 CCDC61Q9Y6R9 512 aa8.85□□□□□ -0.99
LINC00240-202ENST00000424968 CDK11BP21127 795 aaKnown RBP8.84□□□□□ -0.99
LINC00240-202ENST00000424968 CLCN1P35523 988 aa8.84□□□□□ -0.99
LINC00240-202ENST00000424968 BANK1Q8NDB2 785 aa8.84□□□□□ -0.99
LINC00240-202ENST00000424968 CDK11AQ9UQ88 783 aaPredicted RBP8.84□□□□□ -0.99
LINC00240-202ENST00000424968 BRD1O95696 1058 aa8.82□□□□□ -1
LINC00240-202ENST00000424968 FOXD4L5Q5VV16 416 aaPredicted RBP8.82□□□□□ -1
LINC00240-202ENST00000424968 IFNL1Q8IU54 200 aa8.82□□□□□ -1
LINC00240-202ENST00000424968 FOXD4L4Q8WXT5 416 aaPredicted RBP8.82□□□□□ -1
LINC00240-202ENST00000424968 GRXCR2A6NFK2 248 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms