RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 ADGRL1O94910 1474 aa35.54■■■■□ 3.28
PTCHD3P2-201ENST00000424937 EHBP1L1Q8N3D4 1523 aa35.53■■■■□ 3.28
PTCHD3P2-201ENST00000424937 TIAM1Q13009 1591 aa35.5■■■■□ 3.27
PTCHD3P2-201ENST00000424937 EFCAB2Q5VUJ9 269 aa35.49■■■■□ 3.27
PTCHD3P2-201ENST00000424937 SCAPERQ9BY12 1400 aa35.45■■■■□ 3.27
PTCHD3P2-201ENST00000424937 ZMYM4Q5VZL5 1548 aa35.42■■■■□ 3.26
PTCHD3P2-201ENST00000424937 POGZQ7Z3K3 1410 aa35.41■■■■□ 3.26
PTCHD3P2-201ENST00000424937 ARHGEF40Q8TER5 1519 aa35.4■■■■□ 3.26
PTCHD3P2-201ENST00000424937 SUPT6HQ7KZ85 1726 aaKnown RBP35.39■■■■□ 3.26
PTCHD3P2-201ENST00000424937 GPATCH8Q9UKJ3 1502 aaKnown RBP35.37■■■■□ 3.25
PTCHD3P2-201ENST00000424937 ITSN2Q9NZM3 1697 aa35.37■■■■□ 3.25
PTCHD3P2-201ENST00000424937 AEBP2Q6ZN18 517 aaPredicted RBP35.37■■■■□ 3.25
PTCHD3P2-201ENST00000424937 ABCC1P33527 1531 aa35.37■■■■□ 3.25
PTCHD3P2-201ENST00000424937 CCNB3Q8WWL7 1395 aa35.35■■■■□ 3.25
PTCHD3P2-201ENST00000424937 SAMD9LQ8IVG5 1584 aa35.33■■■■□ 3.25
PTCHD3P2-201ENST00000424937 ZFYVE16Q7Z3T8 1539 aa35.32■■■■□ 3.24
PTCHD3P2-201ENST00000424937 KDM4FA0A1W2PPD8 638 aa35.31■■■■□ 3.24
PTCHD3P2-201ENST00000424937 MAP3K1Q13233 1512 aa35.31■■■■□ 3.24
PTCHD3P2-201ENST00000424937 ZNF518AQ6AHZ1 1483 aa35.3■■■■□ 3.24
PTCHD3P2-201ENST00000424937 LRRC9Q6ZRR7 1453 aa35.29■■■■□ 3.24
PTCHD3P2-201ENST00000424937 KDM5CP41229 1560 aa35.28■■■■□ 3.24
PTCHD3P2-201ENST00000424937 NCOA2Q15596 1464 aa35.27■■■■□ 3.24
PTCHD3P2-201ENST00000424937 MAGI2Q86UL8 1455 aa35.27■■■■□ 3.24
PTCHD3P2-201ENST00000424937 ARHGEF12Q9NZN5 1544 aa35.26■■■■□ 3.23
PTCHD3P2-201ENST00000424937 ZNF777Q9ULD5 760 aaPredicted RBP35.25■■■■□ 3.23
PTCHD3P2-201ENST00000424937 YEATS2Q9ULM3 1422 aa35.24■■■■□ 3.23
PTCHD3P2-201ENST00000424937 SYCP2Q9BX26 1530 aa35.23■■■■□ 3.23
PTCHD3P2-201ENST00000424937 HECW2Q9P2P5 1572 aa35.23■■■■□ 3.23
PTCHD3P2-201ENST00000424937 CFDP1Q9UEE9 299 aaPredicted RBP35.22■■■■□ 3.23
PTCHD3P2-201ENST00000424937 TRAPPC8Q9Y2L5 1435 aa35.2■■■■□ 3.23
PTCHD3P2-201ENST00000424937 AFAP1Q8N556 730 aa35.18■■■■□ 3.22
PTCHD3P2-201ENST00000424937 PLEKHH2Q8IVE3 1493 aa35.16■■■■□ 3.22
PTCHD3P2-201ENST00000424937 SIGLEC1Q9BZZ2 1709 aa35.16■■■■□ 3.22
PTCHD3P2-201ENST00000424937 BCORL1Q5H9F3 1711 aa35.15■■■■□ 3.22
PTCHD3P2-201ENST00000424937 APLP2Q06481 763 aa35.14■■■■□ 3.22
PTCHD3P2-201ENST00000424937 KANK4Q5T7N3 995 aaPredicted RBP35.14■■■■□ 3.22
PTCHD3P2-201ENST00000424937 ARID4BQ4LE39 1312 aaPredicted RBP35.11■■■■□ 3.21
PTCHD3P2-201ENST00000424937 ABCA6Q8N139 1617 aa35.11■■■■□ 3.21
PTCHD3P2-201ENST00000424937 DIP2CQ9Y2E4 1556 aa35.1■■■■□ 3.21
PTCHD3P2-201ENST00000424937 KIAA1107Q9UPP5 1409 aa35.1■■■■□ 3.21
PTCHD3P2-201ENST00000424937 MYT1LQ9UL68 1186 aa35.09■■■■□ 3.21
PTCHD3P2-201ENST00000424937 KIDINS220Q9ULH0 1771 aa35.09■■■■□ 3.21
PTCHD3P2-201ENST00000424937 MLH3Q9UHC1 1453 aa35.09■■■■□ 3.21
PTCHD3P2-201ENST00000424937 ADAMTSL3P82987 1691 aa35.08■■■■□ 3.21
PTCHD3P2-201ENST00000424937 ATP10AO60312 1499 aa35.08■■■■□ 3.21
PTCHD3P2-201ENST00000424937 C9orf84Q5VXU9 1444 aa35.06■■■■□ 3.2
PTCHD3P2-201ENST00000424937 HNRNPMP52272 730 aaKnown RBP eCLIP35.06■■■■□ 3.2
PTCHD3P2-201ENST00000424937 ZNF644Q9H582 1327 aaPredicted RBP35.05■■■■□ 3.2
PTCHD3P2-201ENST00000424937 CAMSAP2Q08AD1 1489 aa35.04■■■■□ 3.2
PTCHD3P2-201ENST00000424937 MADDQ8WXG6 1647 aa35.02■■■■□ 3.2
PTCHD3P2-201ENST00000424937 INO80Q9ULG1 1556 aaPredicted RBP35■■■■□ 3.19
PTCHD3P2-201ENST00000424937 ATP7AQ04656 1500 aa34.98■■■■□ 3.19
PTCHD3P2-201ENST00000424937 REREQ9P2R6 1566 aa34.98■■■■□ 3.19
PTCHD3P2-201ENST00000424937 MYOM3Q5VTT5 1437 aa34.97■■■■□ 3.19
PTCHD3P2-201ENST00000424937 MBD5Q9P267 1494 aa34.96■■■■□ 3.19
PTCHD3P2-201ENST00000424937 SPAG9O60271 1321 aaKnown RBP34.95■■■■□ 3.19
PTCHD3P2-201ENST00000424937 RIMS1Q86UR5 1692 aaKnown RBP34.94■■■■□ 3.18
PTCHD3P2-201ENST00000424937 FER1L4A9Z1Z3 1794 aa34.93■■■■□ 3.18
PTCHD3P2-201ENST00000424937 CCDC141Q6ZP82 1450 aa34.9■■■■□ 3.18
PTCHD3P2-201ENST00000424937 ARHGEF5Q12774 1597 aa34.88■■■■□ 3.17
PTCHD3P2-201ENST00000424937 MIA2Q96PC5 1412 aa34.88■■■■□ 3.17
PTCHD3P2-201ENST00000424937 MLECQ14165 292 aa34.87■■■■□ 3.17
PTCHD3P2-201ENST00000424937 PTPRMP28827 1452 aa34.85■■■■□ 3.17
PTCHD3P2-201ENST00000424937 ADGBQ8N7X0 1667 aa34.85■■■■□ 3.17
PTCHD3P2-201ENST00000424937 AGLP35573 1532 aa34.83■■■■□ 3.17
PTCHD3P2-201ENST00000424937 PTPN23Q9H3S7 1636 aa34.82■■■■□ 3.16
PTCHD3P2-201ENST00000424937 PLXNC1O60486 1568 aa34.79■■■■□ 3.16
PTCHD3P2-201ENST00000424937 RTEL1-TNFRSF6BF6WH68 1400 aa34.78■■■■□ 3.16
PTCHD3P2-201ENST00000424937 A2MP01023 1474 aa34.76■■■■□ 3.15
PTCHD3P2-201ENST00000424937 RSPH4AQ5TD94 716 aa34.75■■■■□ 3.15
PTCHD3P2-201ENST00000424937 FGD6Q6ZV73 1430 aa34.74■■■■□ 3.15
PTCHD3P2-201ENST00000424937 CROCC2H7BZ55 1655 aa34.72■■■■□ 3.15
PTCHD3P2-201ENST00000424937 MAST1Q9Y2H9 1570 aa34.7■■■■□ 3.15
PTCHD3P2-201ENST00000424937 TCOF1Q13428 1488 aaKnown RBP34.68■■■■□ 3.14
PTCHD3P2-201ENST00000424937 TSPY4P0CV99 314 aa34.65■■■■□ 3.14
PTCHD3P2-201ENST00000424937 TSPY10P0CW01 314 aa34.65■■■■□ 3.14
PTCHD3P2-201ENST00000424937 DNMT1P26358 1616 aaKnown RBP34.64■■■■□ 3.14
PTCHD3P2-201ENST00000424937 PLPPR3Q6T4P5 718 aa34.63■■■■□ 3.13
PTCHD3P2-201ENST00000424937 SHANK2Q9UPX8 1470 aa34.58■■■■□ 3.13
PTCHD3P2-201ENST00000424937 C3P01024 1663 aa34.57■■■■□ 3.13
PTCHD3P2-201ENST00000424937 DHX29Q7Z478 1369 aaKnown RBP34.57■■■■□ 3.12
PTCHD3P2-201ENST00000424937 ABCC5O15440 1437 aa34.55■■■■□ 3.12
PTCHD3P2-201ENST00000424937 DAPK1P53355 1430 aa34.55■■■■□ 3.12
PTCHD3P2-201ENST00000424937 MROH2AA6NES4 1674 aa34.54■■■■□ 3.12
PTCHD3P2-201ENST00000424937 CLTCQ00610 1675 aaKnown RBP34.54■■■■□ 3.12
PTCHD3P2-201ENST00000424937 PPARGC1BQ86YN6 1023 aaKnown RBP34.54■■■■□ 3.12
PTCHD3P2-201ENST00000424937 ESF1Q9H501 851 aaKnown RBP34.54■■■■□ 3.12
PTCHD3P2-201ENST00000424937 CNTLNQ9NXG0 1405 aa34.51■■■■□ 3.12
PTCHD3P2-201ENST00000424937 GGT6Q6P531 493 aa34.48■■■■□ 3.11
PTCHD3P2-201ENST00000424937 FAM50AQ14320 339 aaKnown RBP34.47■■■■□ 3.11
PTCHD3P2-201ENST00000424937 EIF2AK4Q9P2K8 1649 aaKnown RBP34.46■■■■□ 3.11
PTCHD3P2-201ENST00000424937 CEBPAP49715 358 aaPredicted RBP34.46■■■■□ 3.11
PTCHD3P2-201ENST00000424937 PREX1Q8TCU6 1659 aa34.44■■■■□ 3.1
PTCHD3P2-201ENST00000424937 KIF3BO15066 747 aa34.44■■■■□ 3.1
PTCHD3P2-201ENST00000424937 DUOX2Q9NRD8 1548 aa34.44■■■■□ 3.1
PTCHD3P2-201ENST00000424937 RNF17Q9BXT8 1623 aaKnown RBP34.42■■■■□ 3.1
PTCHD3P2-201ENST00000424937 LMTK3Q96Q04 1460 aa34.42■■■■□ 3.1
PTCHD3P2-201ENST00000424937 KIF15Q9NS87 1388 aa34.4■■■■□ 3.1
PTCHD3P2-201ENST00000424937 SETD1BQ9UPS6 1966 aaKnown RBP34.39■■■■□ 3.1
PTCHD3P2-201ENST00000424937 KDM5DQ9BY66 1539 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms