RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 EFCAB2Q5VUJ9 269 aa24.31■■□□□ 1.48
ABCA1-203ENST00000423487 ARHGAP5Q13017 1502 aa24.31■■□□□ 1.48
ABCA1-203ENST00000423487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.3■■□□□ 1.48
ABCA1-203ENST00000423487 FAM50AQ14320 339 aaKnown RBP24.3■■□□□ 1.48
ABCA1-203ENST00000423487 ZNF777Q9ULD5 760 aaPredicted RBP24.3■■□□□ 1.48
ABCA1-203ENST00000423487 PTPN23Q9H3S7 1636 aa24.29■■□□□ 1.48
ABCA1-203ENST00000423487 TCOF1Q13428 1488 aaKnown RBP24.29■■□□□ 1.48
ABCA1-203ENST00000423487 CDC42BPBQ9Y5S2 1711 aa24.29■■□□□ 1.48
ABCA1-203ENST00000423487 MAP3K4Q9Y6R4 1608 aa24.28■■□□□ 1.48
ABCA1-203ENST00000423487 ZNF644Q9H582 1327 aaPredicted RBP24.25■■□□□ 1.47
ABCA1-203ENST00000423487 FANCAO15360 1455 aa24.25■■□□□ 1.47
ABCA1-203ENST00000423487 CAMSAP2Q08AD1 1489 aa24.24■■□□□ 1.47
ABCA1-203ENST00000423487 KIF13AQ9H1H9 1805 aa24.23■■□□□ 1.47
ABCA1-203ENST00000423487 PLEKHH2Q8IVE3 1493 aa24.22■■□□□ 1.47
ABCA1-203ENST00000423487 TRHP20396 242 aaPredicted RBP24.21■■□□□ 1.47
ABCA1-203ENST00000423487 SAMD9LQ8IVG5 1584 aa24.2■■□□□ 1.46
ABCA1-203ENST00000423487 KIAA1107Q9UPP5 1409 aa24.18■■□□□ 1.46
ABCA1-203ENST00000423487 CFAP74Q9C0B2 1584 aa24.18■■□□□ 1.46
ABCA1-203ENST00000423487 NEO1Q92859 1461 aa24.18■■□□□ 1.46
ABCA1-203ENST00000423487 TEX14Q8IWB6 1497 aa24.17■■□□□ 1.46
ABCA1-203ENST00000423487 AKNAQ7Z591 1439 aa24.17■■□□□ 1.46
ABCA1-203ENST00000423487 RSPH4AQ5TD94 716 aa24.15■■□□□ 1.46
ABCA1-203ENST00000423487 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
ABCA1-203ENST00000423487 ITGAEP38570 1179 aa24.14■■□□□ 1.45
ABCA1-203ENST00000423487 HNRNPMP52272 730 aaKnown RBP eCLIP24.14■■□□□ 1.457e-7■■■□□ 18.8
ABCA1-203ENST00000423487 ADGRL1O94910 1474 aa24.13■■□□□ 1.45
ABCA1-203ENST00000423487 ABCC1P33527 1531 aa24.13■■□□□ 1.45
ABCA1-203ENST00000423487 MBD5Q9P267 1494 aa24.12■■□□□ 1.45
ABCA1-203ENST00000423487 SYCP2Q9BX26 1530 aa24.12■■□□□ 1.45
ABCA1-203ENST00000423487 PPRC1Q5VV67 1664 aaKnown RBP24.11■■□□□ 1.45
ABCA1-203ENST00000423487 TSPOAP1O95153 1857 aa24.11■■□□□ 1.45
ABCA1-203ENST00000423487 DAPK1P53355 1430 aa24.1■■□□□ 1.45
ABCA1-203ENST00000423487 SCAPERQ9BY12 1400 aa24.1■■□□□ 1.45
ABCA1-203ENST00000423487 ARHGEF5Q12774 1597 aa24.1■■□□□ 1.45
ABCA1-203ENST00000423487 ABCC5O15440 1437 aa24.1■■□□□ 1.45
ABCA1-203ENST00000423487 DNMT1P26358 1616 aaKnown RBP24.09■■□□□ 1.45
ABCA1-203ENST00000423487 ARHGEF12Q9NZN5 1544 aa24.09■■□□□ 1.45
ABCA1-203ENST00000423487 CCDC141Q6ZP82 1450 aa24.08■■□□□ 1.45
ABCA1-203ENST00000423487 TSPY4P0CV99 314 aa24.06■■□□□ 1.44
ABCA1-203ENST00000423487 TSPY10P0CW01 314 aa24.06■■□□□ 1.44
ABCA1-203ENST00000423487 PTPRKQ15262 1439 aa24.04■■□□□ 1.44
ABCA1-203ENST00000423487 TRAPPC8Q9Y2L5 1435 aa24.04■■□□□ 1.44
ABCA1-203ENST00000423487 DENND4BO75064 1496 aaPredicted RBP24.03■■□□□ 1.44
ABCA1-203ENST00000423487 SHANK2Q9UPX8 1470 aa24.02■■□□□ 1.44
ABCA1-203ENST00000423487 ZNF518AQ6AHZ1 1483 aa24.01■■□□□ 1.43
ABCA1-203ENST00000423487 POGZQ7Z3K3 1410 aa24.01■■□□□ 1.43
ABCA1-203ENST00000423487 AFAP1Q8N556 730 aa24■■□□□ 1.43
ABCA1-203ENST00000423487 CHIC2Q9UKJ5 165 aa24■■□□□ 1.43
ABCA1-203ENST00000423487 C9orf84Q5VXU9 1444 aa23.99■■□□□ 1.43
ABCA1-203ENST00000423487 CROCC2H7BZ55 1655 aa23.99■■□□□ 1.43
ABCA1-203ENST00000423487 ROCK1Q13464 1354 aa23.97■■□□□ 1.43
ABCA1-203ENST00000423487 SPAG9O60271 1321 aaKnown RBP23.97■■□□□ 1.43
ABCA1-203ENST00000423487 RAPGEF3O95398 923 aa23.95■■□□□ 1.43
ABCA1-203ENST00000423487 MAST1Q9Y2H9 1570 aa23.95■■□□□ 1.42
ABCA1-203ENST00000423487 ANKRD30AQ9BXX3 1397 aa23.95■■□□□ 1.42
ABCA1-203ENST00000423487 ADGRL2O95490 1459 aa23.94■■□□□ 1.42
ABCA1-203ENST00000423487 RTEL1-TNFRSF6BF6WH68 1400 aa23.94■■□□□ 1.42
ABCA1-203ENST00000423487 NCOA1Q15788 1441 aa23.92■■□□□ 1.42
ABCA1-203ENST00000423487 KDM5CP41229 1560 aa23.92■■□□□ 1.42
ABCA1-203ENST00000423487 RRP7BPQ9NSQ0 103 aa23.91■■□□□ 1.42
ABCA1-203ENST00000423487 MYT1LQ9UL68 1186 aa23.9■■□□□ 1.42
ABCA1-203ENST00000423487 HFM1A2PYH4 1435 aa23.9■■□□□ 1.42
ABCA1-203ENST00000423487 ADGBQ8N7X0 1667 aa23.9■■□□□ 1.42
ABCA1-203ENST00000423487 RICTORQ6R327 1708 aa23.89■■□□□ 1.42
ABCA1-203ENST00000423487 MLH3Q9UHC1 1453 aa23.89■■□□□ 1.41
ABCA1-203ENST00000423487 COL17A1Q9UMD9 1497 aaPredicted RBP23.89■■□□□ 1.41
ABCA1-203ENST00000423487 ZFYVE16Q7Z3T8 1539 aa23.88■■□□□ 1.41
ABCA1-203ENST00000423487 ATP7AQ04656 1500 aa23.87■■□□□ 1.41
ABCA1-203ENST00000423487 FRMPD1Q5SYB0 1578 aa23.86■■□□□ 1.41
ABCA1-203ENST00000423487 INO80Q9ULG1 1556 aaPredicted RBP23.86■■□□□ 1.41
ABCA1-203ENST00000423487 NAIPQ13075 1403 aa23.86■■□□□ 1.41
ABCA1-203ENST00000423487 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
ABCA1-203ENST00000423487 KIF15Q9NS87 1388 aa23.85■■□□□ 1.41
ABCA1-203ENST00000423487 PLXNC1O60486 1568 aa23.85■■□□□ 1.41
ABCA1-203ENST00000423487 HECW2Q9P2P5 1572 aa23.85■■□□□ 1.41
ABCA1-203ENST00000423487 ZMYM4Q5VZL5 1548 aa23.85■■□□□ 1.41
ABCA1-203ENST00000423487 MAGI2Q86UL8 1455 aa23.83■■□□□ 1.4
ABCA1-203ENST00000423487 KDM6BO15054 1643 aa23.81■■□□□ 1.4
ABCA1-203ENST00000423487 KIDINS220Q9ULH0 1771 aa23.81■■□□□ 1.4
ABCA1-203ENST00000423487 GCC2Q8IWJ2 1684 aa23.8■■□□□ 1.4
ABCA1-203ENST00000423487 RAB3GAP2Q9H2M9 1393 aa23.79■■□□□ 1.4
ABCA1-203ENST00000423487 ANKRD50Q9ULJ7 1429 aa23.78■■□□□ 1.4
ABCA1-203ENST00000423487 DUOX2Q9NRD8 1548 aa23.78■■□□□ 1.4
ABCA1-203ENST00000423487 HRCP23327 699 aa23.78■■□□□ 1.4
ABCA1-203ENST00000423487 YEATS2Q9ULM3 1422 aa23.74■■□□□ 1.39
ABCA1-203ENST00000423487 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
ABCA1-203ENST00000423487 DHX29Q7Z478 1369 aaKnown RBP23.74■■□□□ 1.39
ABCA1-203ENST00000423487 ERBINQ96RT1 1412 aa23.74■■□□□ 1.39
ABCA1-203ENST00000423487 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
ABCA1-203ENST00000423487 DIP2CQ9Y2E4 1556 aa23.72■■□□□ 1.39
ABCA1-203ENST00000423487 A2MP01023 1474 aa23.72■■□□□ 1.39
ABCA1-203ENST00000423487 ATP10AO60312 1499 aa23.7■■□□□ 1.38
ABCA1-203ENST00000423487 ARHGEF40Q8TER5 1519 aa23.68■■□□□ 1.38
ABCA1-203ENST00000423487 TRIM52Q96A61 297 aa23.64■■□□□ 1.37
ABCA1-203ENST00000423487 REREQ9P2R6 1566 aa23.63■■□□□ 1.37
ABCA1-203ENST00000423487 EIF2AK4Q9P2K8 1649 aaKnown RBP23.63■■□□□ 1.37
ABCA1-203ENST00000423487 KIF3BO15066 747 aa23.63■■□□□ 1.37
ABCA1-203ENST00000423487 AGLP35573 1532 aa23.57■■□□□ 1.36
ABCA1-203ENST00000423487 NUP155O75694 1391 aa23.57■■□□□ 1.36
ABCA1-203ENST00000423487 UNC13BO14795 1591 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms